EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000010324 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 7293 bases
Position: chrPPEB01009804.1:373-7665
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000013556	zf-C2H2	PF00096.26	9e-75	1	13
ENSGAGP00000013556	zf-C2H2	PF00096.26	9e-75	2	13
ENSGAGP00000013556	zf-C2H2	PF00096.26	9e-75	3	13
ENSGAGP00000013556	zf-C2H2	PF00096.26	9e-75	4	13
ENSGAGP00000013556	zf-C2H2	PF00096.26	9e-75	5	13
ENSGAGP00000013556	zf-C2H2	PF00096.26	9e-75	6	13
ENSGAGP00000013556	zf-C2H2	PF00096.26	9e-75	7	13
ENSGAGP00000013556	zf-C2H2	PF00096.26	9e-75	8	13
ENSGAGP00000013556	zf-C2H2	PF00096.26	9e-75	9	13
ENSGAGP00000013556	zf-C2H2	PF00096.26	9e-75	10	13
ENSGAGP00000013556	zf-C2H2	PF00096.26	9e-75	11	13
ENSGAGP00000013556	zf-C2H2	PF00096.26	9e-75	12	13
ENSGAGP00000013556	zf-C2H2	PF00096.26	9e-75	13	13
ENSGAGP00000013553	zf-C2H2	PF00096.26	1e-71	1	12
ENSGAGP00000013553	zf-C2H2	PF00096.26	1e-71	2	12
ENSGAGP00000013553	zf-C2H2	PF00096.26	1e-71	3	12
ENSGAGP00000013553	zf-C2H2	PF00096.26	1e-71	4	12
ENSGAGP00000013553	zf-C2H2	PF00096.26	1e-71	5	12
ENSGAGP00000013553	zf-C2H2	PF00096.26	1e-71	6	12
ENSGAGP00000013553	zf-C2H2	PF00096.26	1e-71	7	12
ENSGAGP00000013553	zf-C2H2	PF00096.26	1e-71	8	12
ENSGAGP00000013553	zf-C2H2	PF00096.26	1e-71	9	12
ENSGAGP00000013553	zf-C2H2	PF00096.26	1e-71	10	12
ENSGAGP00000013553	zf-C2H2	PF00096.26	1e-71	11	12
ENSGAGP00000013553	zf-C2H2	PF00096.26	1e-71	12	12
ENSGAGP00000013538	zf-C2H2	PF00096.26	3.5e-71	1	12
ENSGAGP00000013538	zf-C2H2	PF00096.26	3.5e-71	2	12
ENSGAGP00000013538	zf-C2H2	PF00096.26	3.5e-71	3	12
ENSGAGP00000013538	zf-C2H2	PF00096.26	3.5e-71	4	12
ENSGAGP00000013538	zf-C2H2	PF00096.26	3.5e-71	5	12
ENSGAGP00000013538	zf-C2H2	PF00096.26	3.5e-71	6	12
ENSGAGP00000013538	zf-C2H2	PF00096.26	3.5e-71	7	12
ENSGAGP00000013538	zf-C2H2	PF00096.26	3.5e-71	8	12
ENSGAGP00000013538	zf-C2H2	PF00096.26	3.5e-71	9	12
ENSGAGP00000013538	zf-C2H2	PF00096.26	3.5e-71	10	12
ENSGAGP00000013538	zf-C2H2	PF00096.26	3.5e-71	11	12
ENSGAGP00000013538	zf-C2H2	PF00096.26	3.5e-71	12	12
ENSGAGP00000013552	zf-C2H2	PF00096.26	4.4e-56	1	10
ENSGAGP00000013552	zf-C2H2	PF00096.26	4.4e-56	2	10
ENSGAGP00000013552	zf-C2H2	PF00096.26	4.4e-56	3	10
ENSGAGP00000013552	zf-C2H2	PF00096.26	4.4e-56	4	10
ENSGAGP00000013552	zf-C2H2	PF00096.26	4.4e-56	5	10
ENSGAGP00000013552	zf-C2H2	PF00096.26	4.4e-56	6	10
ENSGAGP00000013552	zf-C2H2	PF00096.26	4.4e-56	7	10
ENSGAGP00000013552	zf-C2H2	PF00096.26	4.4e-56	8	10
ENSGAGP00000013552	zf-C2H2	PF00096.26	4.4e-56	9	10
ENSGAGP00000013552	zf-C2H2	PF00096.26	4.4e-56	10	10
ENSGAGP00000013565	zf-C2H2	PF00096.26	8.3e-38	1	5
ENSGAGP00000013565	zf-C2H2	PF00096.26	8.3e-38	2	5
ENSGAGP00000013565	zf-C2H2	PF00096.26	8.3e-38	3	5
ENSGAGP00000013565	zf-C2H2	PF00096.26	8.3e-38	4	5
ENSGAGP00000013565	zf-C2H2	PF00096.26	8.3e-38	5	5
ENSGAGP00000013552	zf-met	PF12874.7	1.8e-11	1	1
ENSGAGP00000013556	zf-met	PF12874.7	1.6e-09	1	1
ENSGAGP00000013553	zf-met	PF12874.7	1.2e-08	1	1
ENSGAGP00000013538	zf-met	PF12874.7	7.9e-08	1	1
ENSGAGP00000013565	zf-met	PF12874.7	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000015513	-	1407	-	ENSGAGP00000013552	468 (aa)	-	-
ENSGAGT00000015526	-	1056	-	ENSGAGP00000013565	351 (aa)	-	-
ENSGAGT00000015499	-	1647	-	ENSGAGP00000013538	548 (aa)	-	-
ENSGAGT00000015517	-	1755	-	ENSGAGP00000013556	584 (aa)	-	-
ENSGAGT00000015514	-	1983	-	ENSGAGP00000013553	660 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000010324's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000010324's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000010324	-	80	58.915	ENSGAGG00000011574	-	97	58.846
ENSGAGG00000010324	-	80	49.145	ENSGAGG00000005331	-	99	49.145
ENSGAGG00000010324	-	95	66.667	ENSGAGG00000002828	-	99	66.667
ENSGAGG00000010324	-	70	46.667	ENSGAGG00000013021	-	96	46.667
ENSGAGG00000010324	-	86	62.249	ENSGAGG00000006683	-	97	65.269
ENSGAGG00000010324	-	96	63.571	ENSGAGG00000008773	-	100	59.302
ENSGAGG00000010324	-	78	66.429	ENSGAGG00000010492	-	87	68.639
ENSGAGG00000010324	-	93	63.415	ENSGAGG00000019349	-	98	63.415
ENSGAGG00000010324	-	97	64.224	ENSGAGG00000006960	-	85	86.486
ENSGAGG00000010324	-	89	64.234	ENSGAGG00000004740	-	95	64.234
ENSGAGG00000010324	-	82	55.351	ENSGAGG00000018445	-	99	55.678
ENSGAGG00000010324	-	94	65.248	ENSGAGG00000002179	-	97	78.571
ENSGAGG00000010324	-	76	58.763	ENSGAGG00000016529	-	92	58.763
ENSGAGG00000010324	-	95	65.052	ENSGAGG00000010833	-	94	83.333
ENSGAGG00000010324	-	70	30.102	ENSGAGG00000022082	PRDM15	54	32.075
ENSGAGG00000010324	-	70	65.323	ENSGAGG00000009739	-	99	65.652
ENSGAGG00000010324	-	78	58.123	ENSGAGG00000013851	-	93	58.716
ENSGAGG00000010324	-	70	56.180	ENSGAGG00000020168	-	77	51.724
ENSGAGG00000010324	-	81	61.172	ENSGAGG00000017986	-	97	60.588
ENSGAGG00000010324	-	92	59.746	ENSGAGG00000012452	-	97	59.746
ENSGAGG00000010324	-	81	57.143	ENSGAGG00000015232	-	84	60.510
ENSGAGG00000010324	-	74	55.051	ENSGAGG00000006846	-	95	52.294
ENSGAGG00000010324	-	71	54.787	ENSGAGG00000006848	-	63	54.787
ENSGAGG00000010324	-	74	61.034	ENSGAGG00000007230	-	93	60.744
ENSGAGG00000010324	-	96	62.172	ENSGAGG00000020594	-	100	62.172
ENSGAGG00000010324	-	72	41.463	ENSGAGG00000003883	ZNF236	67	48.387
ENSGAGG00000010324	-	71	62.308	ENSGAGG00000000971	-	93	63.386
ENSGAGG00000010324	-	80	70.000	ENSGAGG00000005805	-	100	70.000
ENSGAGG00000010324	-	100	68.814	ENSGAGG00000006323	-	97	65.395
ENSGAGG00000010324	-	93	60.920	ENSGAGG00000001645	-	69	86.364
ENSGAGG00000010324	-	62	44.944	ENSGAGG00000021327	GFI1B	50	44.944
ENSGAGG00000010324	-	84	62.602	ENSGAGG00000017640	-	95	59.712
ENSGAGG00000010324	-	72	84.091	ENSGAGG00000014356	-	88	84.091
ENSGAGG00000010324	-	72	53.509	ENSGAGG00000011399	-	97	50.566
ENSGAGG00000010324	-	81	57.285	ENSGAGG00000015451	-	90	57.874
ENSGAGG00000010324	-	96	63.636	ENSGAGG00000009272	-	96	78.723
ENSGAGG00000010324	-	98	65.714	ENSGAGG00000011487	-	98	89.831
ENSGAGG00000010324	-	68	45.000	ENSGAGG00000015899	GFI1	99	51.923
ENSGAGG00000010324	-	87	64.103	ENSGAGG00000014389	-	98	65.493
ENSGAGG00000010324	-	73	56.597	ENSGAGG00000011366	-	99	51.111
ENSGAGG00000010324	-	76	38.785	ENSGAGG00000022571	ZNF319	93	41.958
ENSGAGG00000010324	-	70	44.025	ENSGAGG00000017094	-	57	44.656
ENSGAGG00000010324	-	78	61.991	ENSGAGG00000001469	-	99	66.497
ENSGAGG00000010324	-	74	32.092	ENSGAGG00000020362	PRDM5	70	34.361
ENSGAGG00000010324	-	70	51.351	ENSGAGG00000004926	-	95	51.351
ENSGAGG00000010324	-	93	66.786	ENSGAGG00000002214	-	96	81.633
ENSGAGG00000010324	-	76	53.818	ENSGAGG00000018885	-	73	53.818
ENSGAGG00000010324	-	83	47.748	ENSGAGG00000015200	MYNN	69	47.748
ENSGAGG00000010324	-	74	43.243	ENSGAGG00000003095	ZNF865	81	43.243
ENSGAGG00000010324	-	95	85.714	ENSGAGG00000020134	-	97	71.626
ENSGAGG00000010324	-	89	52.273	ENSGAGG00000001387	-	71	54.485

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000010324	-	78	62.222	ENSAMXG00000029161	-	99	62.222	Astyanax_mexicanus
ENSGAGG00000010324	-	91	64.679	ENSCPBG00000001421	-	100	66.899	Chrysemys_picta_bellii
ENSGAGG00000010324	-	95	62.025	ENSCPBG00000016841	-	98	75.610	Chrysemys_picta_bellii
ENSGAGG00000010324	-	95	69.686	ENSCPBG00000001272	-	99	69.686	Chrysemys_picta_bellii
ENSGAGG00000010324	-	96	61.603	ENSCPBG00000012976	-	99	64.360	Chrysemys_picta_bellii
ENSGAGG00000010324	-	94	62.976	ENSCPBG00000021479	-	99	62.976	Chrysemys_picta_bellii
ENSGAGG00000010324	-	95	64.014	ENSCPBG00000004030	-	89	86.364	Chrysemys_picta_bellii
ENSGAGG00000010324	-	97	65.018	ENSCPBG00000004990	-	100	65.455	Chrysemys_picta_bellii
ENSGAGG00000010324	-	76	85.484	ENSCPBG00000021487	-	96	85.484	Chrysemys_picta_bellii
ENSGAGG00000010324	-	76	52.212	ENSPSIG00000000522	-	100	55.072	Pelodiscus_sinensis
ENSGAGG00000010324	-	97	57.563	ENSPSIG00000015465	-	99	58.123	Pelodiscus_sinensis
ENSGAGG00000010324	-	80	58.130	ENSPSIG00000015216	-	96	58.130	Pelodiscus_sinensis
ENSGAGG00000010324	-	71	58.955	ENSPSIG00000001026	-	99	52.101	Pelodiscus_sinensis
ENSGAGG00000010324	-	81	59.746	ENSPSIG00000002569	-	89	59.746	Pelodiscus_sinensis
ENSGAGG00000010324	-	94	59.843	ENSPSIG00000009893	-	99	61.475	Pelodiscus_sinensis
ENSGAGG00000010324	-	95	59.416	ENSPSIG00000012865	-	98	61.202	Pelodiscus_sinensis
ENSGAGG00000010324	-	69	60.185	ENSTGUG00000018349	-	100	60.185	Taeniopygia_guttata
ENSGAGG00000010324	-	73	56.031	ENSTGUG00000016850	-	100	56.031	Taeniopygia_guttata
ENSGAGG00000010324	-	70	52.910	ENSTGUG00000015260	-	100	54.321	Taeniopygia_guttata
ENSGAGG00000010324	-	70	55.276	ENSTGUG00000013736	-	99	59.563	Taeniopygia_guttata
ENSGAGG00000010324	-	70	56.250	ENSTGUG00000018518	-	100	56.250	Taeniopygia_guttata
ENSGAGG00000010324	-	70	62.000	ENSTGUG00000018327	-	100	62.000	Taeniopygia_guttata
ENSGAGG00000010324	-	70	54.167	ENSTGUG00000014888	-	99	57.360	Taeniopygia_guttata
ENSGAGG00000010324	-	70	57.325	ENSTGUG00000018374	-	99	57.325	Taeniopygia_guttata
ENSGAGG00000010324	-	70	54.082	ENSTGUG00000018445	-	99	54.450	Taeniopygia_guttata
ENSGAGG00000010324	-	70	56.017	ENSTGUG00000016516	-	100	56.017	Taeniopygia_guttata
ENSGAGG00000010324	-	70	54.000	ENSTGUG00000014614	-	100	56.284	Taeniopygia_guttata
ENSGAGG00000010324	-	70	55.351	ENSTGUG00000016781	-	100	55.351	Taeniopygia_guttata
ENSGAGG00000010324	-	70	59.524	ENSTGUG00000018542	-	100	59.524	Taeniopygia_guttata