EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000010452 (Gene tree)
Gene ID: -
Gene Symbol: RNPS1
Alias: -
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 18404 bases
Position: chrPPEB01000475.1:6016-24419
Accession: 10080
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000013710	RRM_1	PF00076.22	8.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000015703	RNPS1-201	2506	-	ENSGAGP00000013710	307 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000010452's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000010452's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000010452	RNPS1	86	93.156	ENSG00000205937	RNPS1	100	92.667	Homo_sapiens
ENSGAGG00000010452	RNPS1	78	67.782	ENSAPOG00000014649	-	84	68.750	Acanthochromis_polyacanthus
ENSGAGG00000010452	RNPS1	86	93.156	ENSAMEG00000017861	RNPS1	86	93.156	Ailuropoda_melanoleuca
ENSGAGG00000010452	RNPS1	70	65.116	ENSACIG00000014367	-	76	66.047	Amphilophus_citrinellus
ENSGAGG00000010452	RNPS1	78	71.130	ENSAOCG00000002404	RNPS1	81	71.616	Amphiprion_ocellaris
ENSGAGG00000010452	RNPS1	78	72.385	ENSATEG00000024267	RNPS1	84	72.917	Anabas_testudineus
ENSGAGG00000010452	RNPS1	95	69.521	ENSAPLG00000006231	RNPS1	100	69.521	Anas_platyrhynchos
ENSGAGG00000010452	RNPS1	76	92.275	ENSACAG00000004088	RNPS1	94	92.275	Anolis_carolinensis
ENSGAGG00000010452	RNPS1	73	91.071	ENSANAG00000029802	-	88	89.565	Aotus_nancymaae
ENSGAGG00000010452	RNPS1	86	92.776	ENSANAG00000028802	RNPS1	86	92.776	Aotus_nancymaae
ENSGAGG00000010452	RNPS1	82	61.024	ENSACLG00000021537	-	92	68.110	Astatotilapia_calliptera
ENSGAGG00000010452	RNPS1	78	76.250	ENSAMXG00000006330	-	81	69.608	Astyanax_mexicanus
ENSGAGG00000010452	RNPS1	81	92.742	ENSBTAG00000009969	RNPS1	81	92.742	Bos_taurus
ENSGAGG00000010452	RNPS1	86	93.156	ENSCJAG00000014969	RNPS1	100	89.916	Callithrix_jacchus
ENSGAGG00000010452	RNPS1	86	93.156	ENSCAFG00000019397	RNPS1	86	93.156	Canis_familiaris
ENSGAGG00000010452	RNPS1	86	93.156	ENSCAFG00020026159	RNPS1	97	92.444	Canis_lupus_dingo
ENSGAGG00000010452	RNPS1	66	93.103	ENSCHIG00000014621	-	69	92.647	Capra_hircus
ENSGAGG00000010452	RNPS1	86	93.156	ENSTSYG00000001629	RNPS1	86	93.156	Carlito_syrichta
ENSGAGG00000010452	RNPS1	79	88.797	ENSTSYG00000031848	-	98	88.750	Carlito_syrichta
ENSGAGG00000010452	RNPS1	86	93.156	ENSCAPG00000007731	RNPS1	86	93.156	Cavia_aperea
ENSGAGG00000010452	RNPS1	86	93.156	ENSCPOG00000002066	RNPS1	86	93.156	Cavia_porcellus
ENSGAGG00000010452	RNPS1	86	92.776	ENSCCAG00000034480	RNPS1	86	92.776	Cebus_capucinus
ENSGAGG00000010452	RNPS1	93	84.669	ENSCATG00000042361	-	87	87.023	Cercocebus_atys
ENSGAGG00000010452	RNPS1	86	93.156	ENSCATG00000013756	RNPS1	98	88.703	Cercocebus_atys
ENSGAGG00000010452	RNPS1	86	93.156	ENSCLAG00000015546	RNPS1	86	93.156	Chinchilla_lanigera
ENSGAGG00000010452	RNPS1	89	91.606	ENSCSAG00000005219	-	80	92.887	Chlorocebus_sabaeus
ENSGAGG00000010452	RNPS1	86	91.255	ENSCHOG00000004866	RNPS1	86	91.255	Choloepus_hoffmanni
ENSGAGG00000010452	RNPS1	66	80.676	ENSCANG00000030189	-	78	61.353	Colobus_angolensis_palliatus
ENSGAGG00000010452	RNPS1	86	93.156	ENSCANG00000041307	RNPS1	94	92.511	Colobus_angolensis_palliatus
ENSGAGG00000010452	RNPS1	86	93.156	ENSCGRG00001020431	Rnps1	86	93.156	Cricetulus_griseus_chok1gshd
ENSGAGG00000010452	RNPS1	79	92.946	ENSCGRG00000014021	Rnps1	79	92.917	Cricetulus_griseus_crigri
ENSGAGG00000010452	RNPS1	84	66.794	ENSCSEG00000000402	RNPS1	85	66.794	Cynoglossus_semilaevis
ENSGAGG00000010452	RNPS1	79	69.136	ENSCSEG00000015997	RNPS1	83	70.000	Cynoglossus_semilaevis
ENSGAGG00000010452	RNPS1	78	64.854	ENSDARG00000116743	rnps1	84	70.833	Danio_rerio
ENSGAGG00000010452	RNPS1	78	64.854	ENSDARG00000100188	RNPS1	84	70.833	Danio_rerio
ENSGAGG00000010452	RNPS1	86	93.156	ENSDNOG00000016081	RNPS1	86	93.156	Dasypus_novemcinctus
ENSGAGG00000010452	RNPS1	65	67.337	ENSDNOG00000038751	-	98	67.857	Dasypus_novemcinctus
ENSGAGG00000010452	RNPS1	86	92.395	ENSDORG00000001755	Rnps1	86	92.395	Dipodomys_ordii
ENSGAGG00000010452	RNPS1	86	93.156	ENSEASG00005004862	RNPS1	86	93.156	Equus_asinus_asinus
ENSGAGG00000010452	RNPS1	79	88.066	ENSECAG00000023288	RNPS1	83	90.909	Equus_caballus
ENSGAGG00000010452	RNPS1	70	70.233	ENSELUG00000015003	RNPS1	75	64.651	Esox_lucius
ENSGAGG00000010452	RNPS1	86	92.776	ENSFCAG00000007690	RNPS1	86	92.776	Felis_catus
ENSGAGG00000010452	RNPS1	93	97.887	ENSFALG00000004868	RNPS1	100	97.887	Ficedula_albicollis
ENSGAGG00000010452	RNPS1	86	92.395	ENSFDAG00000003386	RNPS1	86	92.395	Fukomys_damarensis
ENSGAGG00000010452	RNPS1	71	68.807	ENSFHEG00000011705	RNPS1	75	69.907	Fundulus_heteroclitus
ENSGAGG00000010452	RNPS1	92	97.880	ENSGALG00000009288	RNPS1	99	97.880	Gallus_gallus
ENSGAGG00000010452	RNPS1	67	91.748	ENSGGOG00000026421	-	79	91.748	Gorilla_gorilla
ENSGAGG00000010452	RNPS1	86	93.156	ENSGGOG00000014275	RNPS1	96	92.105	Gorilla_gorilla
ENSGAGG00000010452	RNPS1	78	90.417	ENSHGLG00000006292	-	94	90.417	Heterocephalus_glaber_female
ENSGAGG00000010452	RNPS1	86	93.156	ENSHGLG00000013957	RNPS1	86	93.156	Heterocephalus_glaber_female
ENSGAGG00000010452	RNPS1	86	93.156	ENSHGLG00100003539	RNPS1	86	93.156	Heterocephalus_glaber_male
ENSGAGG00000010452	RNPS1	79	77.551	ENSHGLG00100017879	-	80	66.529	Heterocephalus_glaber_male
ENSGAGG00000010452	RNPS1	66	86.275	ENSHGLG00100011610	-	83	86.275	Heterocephalus_glaber_male
ENSGAGG00000010452	RNPS1	84	88.803	ENSHGLG00100015267	-	81	89.286	Heterocephalus_glaber_male
ENSGAGG00000010452	RNPS1	86	68.441	ENSSTOG00000013200	RNPS1	50	94.309	Ictidomys_tridecemlineatus
ENSGAGG00000010452	RNPS1	86	92.776	ENSJJAG00000015576	-	86	92.776	Jaculus_jaculus
ENSGAGG00000010452	RNPS1	78	89.121	ENSLACG00000007112	RNPS1	84	89.121	Latimeria_chalumnae
ENSGAGG00000010452	RNPS1	78	69.456	ENSLOCG00000001758	RNPS1	84	84.937	Lepisosteus_oculatus
ENSGAGG00000010452	RNPS1	86	93.156	ENSMFAG00000042142	RNPS1	86	93.156	Macaca_fascicularis
ENSGAGG00000010452	RNPS1	87	88.060	ENSMMUG00000041726	-	92	87.833	Macaca_mulatta
ENSGAGG00000010452	RNPS1	66	93.564	ENSMMUG00000019238	-	80	94.355	Macaca_mulatta
ENSGAGG00000010452	RNPS1	87	88.433	ENSMNEG00000024827	-	92	88.213	Macaca_nemestrina
ENSGAGG00000010452	RNPS1	86	93.156	ENSMLEG00000036928	RNPS1	86	93.156	Mandrillus_leucophaeus
ENSGAGG00000010452	RNPS1	67	86.893	ENSMLEG00000040232	-	80	86.893	Mandrillus_leucophaeus
ENSGAGG00000010452	RNPS1	78	69.874	ENSMAMG00000021609	-	84	70.417	Mastacembelus_armatus
ENSGAGG00000010452	RNPS1	79	71.311	ENSMAMG00000021148	-	88	66.284	Mastacembelus_armatus
ENSGAGG00000010452	RNPS1	79	95.455	ENSMGAG00000010042	RNPS1	100	95.455	Meleagris_gallopavo
ENSGAGG00000010452	RNPS1	86	92.776	ENSMICG00000031543	RNPS1	86	92.776	Microcebus_murinus
ENSGAGG00000010452	RNPS1	86	93.156	ENSMOCG00000003429	Rnps1	86	93.156	Microtus_ochrogaster
ENSGAGG00000010452	RNPS1	70	66.512	ENSMMOG00000010863	RNPS1	75	65.116	Mola_mola
ENSGAGG00000010452	RNPS1	86	77.652	ENSMODG00000015891	RNPS1	86	79.545	Monodelphis_domestica
ENSGAGG00000010452	RNPS1	86	93.156	ENSMUSG00000034681	Rnps1	86	93.156	Mus_musculus
ENSGAGG00000010452	RNPS1	86	92.395	MGP_PahariEiJ_G0023498	Rnps1	85	94.142	Mus_pahari
ENSGAGG00000010452	RNPS1	86	93.156	MGP_SPRETEiJ_G0022092	Rnps1	86	93.156	Mus_spretus
ENSGAGG00000010452	RNPS1	86	93.156	ENSMLUG00000016808	RNPS1	86	93.156	Myotis_lucifugus
ENSGAGG00000010452	RNPS1	86	92.776	ENSNGAG00000023702	Rnps1	85	94.142	Nannospalax_galili
ENSGAGG00000010452	RNPS1	70	66.047	ENSNBRG00000023437	RNPS1	75	64.651	Neolamprologus_brichardi
ENSGAGG00000010452	RNPS1	80	61.538	ENSNBRG00000014540	-	92	66.797	Neolamprologus_brichardi
ENSGAGG00000010452	RNPS1	89	91.544	ENSNLEG00000009243	RNPS1	98	92.181	Nomascus_leucogenys
ENSGAGG00000010452	RNPS1	86	93.156	ENSMEUG00000008882	RNPS1	86	93.156	Notamacropus_eugenii
ENSGAGG00000010452	RNPS1	78	89.583	ENSOPRG00000016422	RNPS1	79	89.583	Ochotona_princeps
ENSGAGG00000010452	RNPS1	54	60.241	ENSODEG00000002513	-	54	59.677	Octodon_degus
ENSGAGG00000010452	RNPS1	52	65.625	ENSODEG00000017258	-	51	63.710	Octodon_degus
ENSGAGG00000010452	RNPS1	78	68.050	ENSORLG00015011183	RNPS1	74	69.295	Oryzias_latipes_hsok
ENSGAGG00000010452	RNPS1	86	93.156	ENSOARG00000018056	-	73	93.156	Ovis_aries
ENSGAGG00000010452	RNPS1	88	88.889	ENSPPAG00000011845	RNPS1	90	87.866	Pan_paniscus
ENSGAGG00000010452	RNPS1	74	92.105	ENSPPAG00000037836	-	96	92.105	Pan_paniscus
ENSGAGG00000010452	RNPS1	86	92.776	ENSPPRG00000011255	RNPS1	86	92.776	Panthera_pardus
ENSGAGG00000010452	RNPS1	62	82.781	ENSPTIG00000015643	RNPS1	85	94.355	Panthera_tigris_altaica
ENSGAGG00000010452	RNPS1	86	93.156	ENSPTRG00000031310	RNPS1	86	93.156	Pan_troglodytes
ENSGAGG00000010452	RNPS1	74	91.189	ENSPTRG00000046326	-	91	87.029	Pan_troglodytes
ENSGAGG00000010452	RNPS1	86	93.156	ENSPANG00000015748	RNPS1	86	93.156	Papio_anubis
ENSGAGG00000010452	RNPS1	66	68.137	ENSPANG00000033576	-	75	68.657	Papio_anubis
ENSGAGG00000010452	RNPS1	78	80.000	ENSPKIG00000023465	RNPS1	84	80.000	Paramormyrops_kingsleyae
ENSGAGG00000010452	RNPS1	100	99.023	ENSPSIG00000006048	RNPS1	100	99.023	Pelodiscus_sinensis
ENSGAGG00000010452	RNPS1	86	93.156	ENSPEMG00000012797	Rnps1	86	93.156	Peromyscus_maniculatus_bairdii
ENSGAGG00000010452	RNPS1	60	84.106	ENSPCIG00000016114	-	80	92.742	Phascolarctos_cinereus
ENSGAGG00000010452	RNPS1	86	93.156	ENSPCIG00000025012	RNPS1	86	93.156	Phascolarctos_cinereus
ENSGAGG00000010452	RNPS1	86	90.494	ENSPCAG00000004514	RNPS1	86	90.494	Procavia_capensis
ENSGAGG00000010452	RNPS1	86	92.776	ENSPCOG00000005478	RNPS1	86	92.776	Propithecus_coquereli
ENSGAGG00000010452	RNPS1	86	92.776	ENSPVAG00000005105	RNPS1	86	92.776	Pteropus_vampyrus
ENSGAGG00000010452	RNPS1	78	73.640	ENSPNAG00000025479	RNPS1	84	69.874	Pygocentrus_nattereri
ENSGAGG00000010452	RNPS1	86	93.156	ENSRNOG00000008703	Rnps1	86	93.156	Rattus_norvegicus
ENSGAGG00000010452	RNPS1	86	89.513	ENSRBIG00000038965	-	96	89.513	Rhinopithecus_bieti
ENSGAGG00000010452	RNPS1	86	93.156	ENSRROG00000041252	RNPS1	94	92.511	Rhinopithecus_roxellana
ENSGAGG00000010452	RNPS1	86	93.156	ENSSBOG00000027927	RNPS1	86	93.156	Saimiri_boliviensis_boliviensis
ENSGAGG00000010452	RNPS1	86	93.156	ENSSHAG00000016951	RNPS1	86	93.156	Sarcophilus_harrisii
ENSGAGG00000010452	RNPS1	79	77.686	ENSSFOG00015019341	-	75	70.539	Scleropages_formosus
ENSGAGG00000010452	RNPS1	78	72.500	ENSSFOG00015022746	RNPS1	87	66.527	Scleropages_formosus
ENSGAGG00000010452	RNPS1	78	70.711	ENSSDUG00000011453	RNPS1	84	71.250	Seriola_dumerili
ENSGAGG00000010452	RNPS1	71	61.638	ENSSLDG00000021341	RNPS1	76	67.157	Seriola_lalandi_dorsalis
ENSGAGG00000010452	RNPS1	78	90.000	ENSSARG00000001577	RNPS1	86	90.000	Sorex_araneus
ENSGAGG00000010452	RNPS1	100	98.046	ENSSPUG00000016588	RNPS1	100	98.046	Sphenodon_punctatus
ENSGAGG00000010452	RNPS1	86	93.536	ENSSSCG00000008048	RNPS1	86	93.536	Sus_scrofa
ENSGAGG00000010452	RNPS1	93	97.535	ENSTGUG00000003237	RNPS1	100	97.535	Taeniopygia_guttata
ENSGAGG00000010452	RNPS1	78	72.083	ENSTRUG00000008602	RNPS1	84	72.083	Takifugu_rubripes
ENSGAGG00000010452	RNPS1	79	72.840	ENSTNIG00000009753	RNPS1	84	72.840	Tetraodon_nigroviridis
ENSGAGG00000010452	RNPS1	89	93.382	ENSTBEG00000009098	RNPS1	97	93.156	Tupaia_belangeri
ENSGAGG00000010452	RNPS1	86	93.156	ENSTTRG00000008220	RNPS1	86	93.156	Tursiops_truncatus
ENSGAGG00000010452	RNPS1	86	93.156	ENSUAMG00000004462	RNPS1	96	93.156	Ursus_americanus
ENSGAGG00000010452	RNPS1	86	93.156	ENSUMAG00000022327	RNPS1	86	93.156	Ursus_maritimus
ENSGAGG00000010452	RNPS1	86	93.156	ENSVVUG00000009244	RNPS1	86	93.156	Vulpes_vulpes
ENSGAGG00000010452	RNPS1	76	72.881	ENSXETG00000024439	rnps1	73	73.451	Xenopus_tropicalis