EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000010802 (Gene tree)
Gene ID: -
Gene Symbol: LARP6
Alias: FLJ11196|acheron
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 32738 bases
Position: chrPPEB01000028.1:551699-584436
Accession: 24012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000014192	La	PF05383.17	1.7e-20	1	1
ENSGAGP00000014189	La	PF05383.17	1.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000016239	LARP6-201	2195	-	ENSGAGP00000014189	681 (aa)	-	-
ENSGAGT00000016242	LARP6-202	2896	-	ENSGAGP00000014192	672 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000010802's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000010802's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000010802	LARP6	54	41.892	ENSGAGG00000005511	-	82	40.162

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000010802	LARP6	58	70.707	ENSG00000166173	LARP6	90	66.216	Homo_sapiens
ENSGAGG00000010802	LARP6	63	57.666	ENSAPOG00000021773	larp6a	62	57.666	Acanthochromis_polyacanthus
ENSGAGG00000010802	LARP6	57	71.391	ENSAMEG00000008897	LARP6	89	71.391	Ailuropoda_melanoleuca
ENSGAGG00000010802	LARP6	63	58.810	ENSACIG00000005166	larp6a	79	60.539	Amphilophus_citrinellus
ENSGAGG00000010802	LARP6	63	57.666	ENSAOCG00000002284	larp6a	62	57.666	Amphiprion_ocellaris
ENSGAGG00000010802	LARP6	63	57.666	ENSAPEG00000008077	larp6a	83	57.666	Amphiprion_percula
ENSGAGG00000010802	LARP6	63	58.998	ENSATEG00000004018	larp6a	57	60.784	Anabas_testudineus
ENSGAGG00000010802	LARP6	56	81.053	ENSAPLG00000009914	LARP6	90	81.053	Anas_platyrhynchos
ENSGAGG00000010802	LARP6	56	72.632	ENSACAG00000008613	LARP6	89	72.368	Anolis_carolinensis
ENSGAGG00000010802	LARP6	58	70.960	ENSANAG00000024860	LARP6	90	66.441	Aotus_nancymaae
ENSGAGG00000010802	LARP6	63	59.268	ENSACLG00000018561	larp6a	56	61.029	Astatotilapia_calliptera
ENSGAGG00000010802	LARP6	54	40.761	ENSAMXG00000036816	-	83	40.489	Astyanax_mexicanus
ENSGAGG00000010802	LARP6	58	57.039	ENSAMXG00000029387	larp6a	62	57.524	Astyanax_mexicanus
ENSGAGG00000010802	LARP6	59	69.925	ENSBTAG00000003915	LARP6	81	69.925	Bos_taurus
ENSGAGG00000010802	LARP6	64	65.766	ENSCJAG00000046236	-	90	65.766	Callithrix_jacchus
ENSGAGG00000010802	LARP6	58	70.707	ENSCJAG00000018642	-	90	66.216	Callithrix_jacchus
ENSGAGG00000010802	LARP6	57	72.178	ENSCAFG00000017616	LARP6	89	72.178	Canis_familiaris
ENSGAGG00000010802	LARP6	65	65.625	ENSCAFG00020007296	LARP6	92	66.518	Canis_lupus_dingo
ENSGAGG00000010802	LARP6	59	69.424	ENSCHIG00000013742	LARP6	81	69.424	Capra_hircus
ENSGAGG00000010802	LARP6	56	71.693	ENSTSYG00000028124	LARP6	77	71.693	Carlito_syrichta
ENSGAGG00000010802	LARP6	56	72.487	ENSCAPG00000015452	LARP6	89	72.487	Cavia_aperea
ENSGAGG00000010802	LARP6	64	67.342	ENSCPOG00000022687	LARP6	90	66.216	Cavia_porcellus
ENSGAGG00000010802	LARP6	58	71.212	ENSCCAG00000036320	LARP6	90	66.441	Cebus_capucinus
ENSGAGG00000010802	LARP6	59	70.426	ENSCATG00000042432	LARP6	91	65.996	Cercocebus_atys
ENSGAGG00000010802	LARP6	62	67.667	ENSCLAG00000007893	LARP6	88	67.667	Chinchilla_lanigera
ENSGAGG00000010802	LARP6	59	70.426	ENSCSAG00000013672	LARP6	91	65.996	Chlorocebus_sabaeus
ENSGAGG00000010802	LARP6	58	70.633	ENSCHOG00000003318	LARP6	83	70.633	Choloepus_hoffmanni
ENSGAGG00000010802	LARP6	70	93.404	ENSCPBG00000010771	LARP6	91	93.617	Chrysemys_picta_bellii
ENSGAGG00000010802	LARP6	57	71.916	ENSCANG00000025833	LARP6	90	71.916	Colobus_angolensis_palliatus
ENSGAGG00000010802	LARP6	58	69.697	ENSCGRG00001024472	Larp6	80	69.697	Cricetulus_griseus_chok1gshd
ENSGAGG00000010802	LARP6	58	69.697	ENSCGRG00000004527	Larp6	80	69.697	Cricetulus_griseus_crigri
ENSGAGG00000010802	LARP6	63	58.486	ENSCSEG00000011196	larp6a	60	60.197	Cynoglossus_semilaevis
ENSGAGG00000010802	LARP6	63	59.039	ENSCVAG00000009605	larp6a	64	59.039	Cyprinodon_variegatus
ENSGAGG00000010802	LARP6	63	59.770	ENSDARG00000005355	larp6a	88	61.240	Danio_rerio
ENSGAGG00000010802	LARP6	58	70.380	ENSDNOG00000042993	LARP6	81	70.380	Dasypus_novemcinctus
ENSGAGG00000010802	LARP6	62	64.516	ENSDORG00000023910	Larp6	88	63.825	Dipodomys_ordii
ENSGAGG00000010802	LARP6	58	69.697	ENSEASG00005005490	LARP6	59	69.697	Equus_asinus_asinus
ENSGAGG00000010802	LARP6	58	69.949	ENSECAG00000014190	LARP6	89	68.579	Equus_caballus
ENSGAGG00000010802	LARP6	58	60.488	ENSELUG00000007341	larp6a	59	60.488	Esox_lucius
ENSGAGG00000010802	LARP6	58	70.202	ENSFCAG00000001361	LARP6	80	70.202	Felis_catus
ENSGAGG00000010802	LARP6	58	77.834	ENSFALG00000012389	LARP6	90	74.074	Ficedula_albicollis
ENSGAGG00000010802	LARP6	58	72.081	ENSFDAG00000019994	LARP6	77	72.081	Fukomys_damarensis
ENSGAGG00000010802	LARP6	63	58.581	ENSFHEG00000010312	larp6a	62	58.581	Fundulus_heteroclitus
ENSGAGG00000010802	LARP6	65	76.126	ENSGALG00000004046	LARP6	90	76.126	Gallus_gallus
ENSGAGG00000010802	LARP6	86	47.114	ENSGAFG00000009426	larp6a	62	59.039	Gambusia_affinis
ENSGAGG00000010802	LARP6	56	59.137	ENSGACG00000014622	larp6a	88	59.137	Gasterosteus_aculeatus
ENSGAGG00000010802	LARP6	56	72.222	ENSGGOG00000024151	LARP6	89	72.222	Gorilla_gorilla
ENSGAGG00000010802	LARP6	63	59.268	ENSHBUG00000021014	larp6a	56	61.029	Haplochromis_burtoni
ENSGAGG00000010802	LARP6	58	71.357	ENSHGLG00000015112	LARP6	80	71.357	Heterocephalus_glaber_female
ENSGAGG00000010802	LARP6	56	73.545	ENSHGLG00100013159	LARP6	89	73.545	Heterocephalus_glaber_male
ENSGAGG00000010802	LARP6	63	57.604	ENSHCOG00000001241	larp6a	83	57.834	Hippocampus_comes
ENSGAGG00000010802	LARP6	58	57.213	ENSIPUG00000010187	larp6	62	57.702	Ictalurus_punctatus
ENSGAGG00000010802	LARP6	61	69.305	ENSSTOG00000024279	LARP6	86	71.212	Ictidomys_tridecemlineatus
ENSGAGG00000010802	LARP6	66	64.680	ENSJJAG00000011013	Larp6	91	64.901	Jaculus_jaculus
ENSGAGG00000010802	LARP6	58	59.606	ENSKMAG00000001702	larp6a	55	59.606	Kryptolebias_marmoratus
ENSGAGG00000010802	LARP6	63	56.522	ENSLBEG00000000170	larp6a	77	57.843	Labrus_bergylta
ENSGAGG00000010802	LARP6	70	67.292	ENSLACG00000018706	LARP6	91	66.667	Latimeria_chalumnae
ENSGAGG00000010802	LARP6	54	44.474	ENSLACG00000002786	-	85	45.845	Latimeria_chalumnae
ENSGAGG00000010802	LARP6	62	59.861	ENSLOCG00000014592	larp6a	64	59.861	Lepisosteus_oculatus
ENSGAGG00000010802	LARP6	58	43.284	ENSLOCG00000008547	-	77	41.206	Lepisosteus_oculatus
ENSGAGG00000010802	LARP6	58	70.960	ENSLAFG00000016343	LARP6	89	70.960	Loxodonta_africana
ENSGAGG00000010802	LARP6	59	70.426	ENSMFAG00000035507	LARP6	89	70.426	Macaca_fascicularis
ENSGAGG00000010802	LARP6	59	70.426	ENSMMUG00000004429	LARP6	83	70.426	Macaca_mulatta
ENSGAGG00000010802	LARP6	59	70.426	ENSMNEG00000045335	LARP6	91	65.996	Macaca_nemestrina
ENSGAGG00000010802	LARP6	57	71.916	ENSMLEG00000038587	LARP6	90	71.916	Mandrillus_leucophaeus
ENSGAGG00000010802	LARP6	63	58.810	ENSMAMG00000005261	larp6a	58	60.539	Mastacembelus_armatus
ENSGAGG00000010802	LARP6	63	59.268	ENSMZEG00005005774	larp6a	56	61.029	Maylandia_zebra
ENSGAGG00000010802	LARP6	56	80.211	ENSMGAG00000005077	LARP6	89	80.211	Meleagris_gallopavo
ENSGAGG00000010802	LARP6	58	70.202	ENSMAUG00000018486	Larp6	80	70.202	Mesocricetus_auratus
ENSGAGG00000010802	LARP6	58	71.247	ENSMICG00000011234	LARP6	82	70.398	Microcebus_murinus
ENSGAGG00000010802	LARP6	58	69.697	ENSMOCG00000010492	Larp6	80	69.697	Microtus_ochrogaster
ENSGAGG00000010802	LARP6	63	58.945	ENSMMOG00000016284	larp6a	84	58.945	Mola_mola
ENSGAGG00000010802	LARP6	63	66.743	ENSMODG00000009034	LARP6	85	66.366	Monodelphis_domestica
ENSGAGG00000010802	LARP6	63	58.581	ENSMALG00000014439	larp6a	83	58.581	Monopterus_albus
ENSGAGG00000010802	LARP6	62	66.975	MGP_CAROLIEiJ_G0032314	Larp6	81	70.707	Mus_caroli
ENSGAGG00000010802	LARP6	58	70.707	ENSMUSG00000034839	Larp6	80	70.707	Mus_musculus
ENSGAGG00000010802	LARP6	58	71.212	MGP_PahariEiJ_G0015180	Larp6	80	71.212	Mus_pahari
ENSGAGG00000010802	LARP6	58	70.202	MGP_SPRETEiJ_G0033452	Larp6	80	70.202	Mus_spretus
ENSGAGG00000010802	LARP6	57	71.129	ENSMPUG00000017086	LARP6	89	71.129	Mustela_putorius_furo
ENSGAGG00000010802	LARP6	59	70.426	ENSMLUG00000010319	LARP6	81	70.426	Myotis_lucifugus
ENSGAGG00000010802	LARP6	58	68.687	ENSNGAG00000014238	Larp6	80	68.687	Nannospalax_galili
ENSGAGG00000010802	LARP6	63	59.497	ENSNBRG00000008120	larp6a	78	61.275	Neolamprologus_brichardi
ENSGAGG00000010802	LARP6	58	70.707	ENSNLEG00000013691	LARP6	81	70.707	Nomascus_leucogenys
ENSGAGG00000010802	LARP6	52	63.352	ENSOPRG00000004868	-	99	63.248	Ochotona_princeps
ENSGAGG00000010802	LARP6	58	70.127	ENSODEG00000015958	LARP6	80	70.127	Octodon_degus
ENSGAGG00000010802	LARP6	63	58.998	ENSONIG00000002901	larp6a	78	60.732	Oreochromis_niloticus
ENSGAGG00000010802	LARP6	54	65.946	ENSOCUG00000009306	LARP6	91	63.990	Oryctolagus_cuniculus
ENSGAGG00000010802	LARP6	63	58.581	ENSORLG00000014256	larp6a	85	58.581	Oryzias_latipes
ENSGAGG00000010802	LARP6	63	58.581	ENSORLG00020019657	larp6a	62	58.581	Oryzias_latipes_hni
ENSGAGG00000010802	LARP6	63	58.810	ENSORLG00015017915	larp6a	62	58.810	Oryzias_latipes_hsok
ENSGAGG00000010802	LARP6	63	58.810	ENSOMEG00000017049	larp6a	63	58.810	Oryzias_melastigma
ENSGAGG00000010802	LARP6	65	64.176	ENSOGAG00000000522	LARP6	83	69.024	Otolemur_garnettii
ENSGAGG00000010802	LARP6	57	70.619	ENSOARG00000018750	LARP6	90	70.619	Ovis_aries
ENSGAGG00000010802	LARP6	56	72.222	ENSPPAG00000031247	LARP6	89	72.222	Pan_paniscus
ENSGAGG00000010802	LARP6	58	70.202	ENSPPRG00000011282	LARP6	80	70.202	Panthera_pardus
ENSGAGG00000010802	LARP6	56	71.429	ENSPTIG00000015318	LARP6	77	71.429	Panthera_tigris_altaica
ENSGAGG00000010802	LARP6	58	70.707	ENSPTRG00000007234	LARP6	90	66.216	Pan_troglodytes
ENSGAGG00000010802	LARP6	59	70.426	ENSPANG00000016362	LARP6	91	65.996	Papio_anubis
ENSGAGG00000010802	LARP6	62	58.864	ENSPKIG00000004511	LARP6	60	60.775	Paramormyrops_kingsleyae
ENSGAGG00000010802	LARP6	65	57.424	ENSPKIG00000020103	larp6a	86	57.330	Paramormyrops_kingsleyae
ENSGAGG00000010802	LARP6	63	59.132	ENSPMGG00000006958	larp6a	85	59.132	Periophthalmus_magnuspinnatus
ENSGAGG00000010802	LARP6	62	67.206	ENSPEMG00000012909	Larp6	80	69.697	Peromyscus_maniculatus_bairdii
ENSGAGG00000010802	LARP6	59	71.429	ENSPCIG00000020765	LARP6	77	71.429	Phascolarctos_cinereus
ENSGAGG00000010802	LARP6	63	58.770	ENSPFOG00000014175	larp6a	83	58.770	Poecilia_formosa
ENSGAGG00000010802	LARP6	63	59.039	ENSPLAG00000011105	larp6a	62	59.039	Poecilia_latipinna
ENSGAGG00000010802	LARP6	63	59.039	ENSPMEG00000011085	larp6a	62	59.039	Poecilia_mexicana
ENSGAGG00000010802	LARP6	63	58.581	ENSPREG00000008067	larp6a	62	58.581	Poecilia_reticulata
ENSGAGG00000010802	LARP6	58	70.707	ENSPPYG00000006604	LARP6	90	66.216	Pongo_abelii
ENSGAGG00000010802	LARP6	58	69.949	ENSPCOG00000022934	LARP6	80	69.949	Propithecus_coquereli
ENSGAGG00000010802	LARP6	59	69.925	ENSPVAG00000005618	LARP6	89	66.514	Pteropus_vampyrus
ENSGAGG00000010802	LARP6	63	59.497	ENSPNYG00000009835	larp6a	78	61.275	Pundamilia_nyererei
ENSGAGG00000010802	LARP6	59	56.490	ENSPNAG00000017966	larp6a	68	56.971	Pygocentrus_nattereri
ENSGAGG00000010802	LARP6	58	70.202	ENSRNOG00000012438	Larp6	80	70.202	Rattus_norvegicus
ENSGAGG00000010802	LARP6	61	68.510	ENSRBIG00000032902	LARP6	81	70.380	Rhinopithecus_bieti
ENSGAGG00000010802	LARP6	59	70.426	ENSRROG00000043074	LARP6	81	70.426	Rhinopithecus_roxellana
ENSGAGG00000010802	LARP6	56	72.222	ENSSBOG00000024190	LARP6	89	72.222	Saimiri_boliviensis_boliviensis
ENSGAGG00000010802	LARP6	57	68.504	ENSSHAG00000018495	LARP6	89	68.504	Sarcophilus_harrisii
ENSGAGG00000010802	LARP6	63	54.756	ENSSFOG00015002254	LARP6	82	54.060	Scleropages_formosus
ENSGAGG00000010802	LARP6	56	59.640	ENSSFOG00015023268	larp6a	75	59.640	Scleropages_formosus
ENSGAGG00000010802	LARP6	63	58.998	ENSSMAG00000009953	larp6a	57	60.732	Scophthalmus_maximus
ENSGAGG00000010802	LARP6	63	58.810	ENSSDUG00000007438	larp6a	57	60.539	Seriola_dumerili
ENSGAGG00000010802	LARP6	63	58.810	ENSSLDG00000016647	larp6a	58	60.539	Seriola_lalandi_dorsalis
ENSGAGG00000010802	LARP6	56	85.411	ENSSPUG00000011312	LARP6	89	85.411	Sphenodon_punctatus
ENSGAGG00000010802	LARP6	63	57.666	ENSSPAG00000020502	larp6a	62	57.666	Stegastes_partitus
ENSGAGG00000010802	LARP6	59	69.424	ENSSSCG00000004974	LARP6	81	69.424	Sus_scrofa
ENSGAGG00000010802	LARP6	56	78.158	ENSTGUG00000005808	LARP6	89	78.158	Taeniopygia_guttata
ENSGAGG00000010802	LARP6	63	59.039	ENSTRUG00000003151	larp6a	64	59.268	Takifugu_rubripes
ENSGAGG00000010802	LARP6	63	57.176	ENSTNIG00000011926	larp6a	87	57.176	Tetraodon_nigroviridis
ENSGAGG00000010802	LARP6	56	70.866	ENSTBEG00000015077	LARP6	90	70.866	Tupaia_belangeri
ENSGAGG00000010802	LARP6	60	67.241	ENSUAMG00000010467	LARP6	77	69.816	Ursus_americanus
ENSGAGG00000010802	LARP6	59	69.704	ENSVVUG00000015227	LARP6	90	69.704	Vulpes_vulpes
ENSGAGG00000010802	LARP6	65	69.977	ENSXETG00000020340	larp6	88	69.977	Xenopus_tropicalis
ENSGAGG00000010802	LARP6	63	58.465	ENSXCOG00000012654	larp6a	89	58.691	Xiphophorus_couchianus
ENSGAGG00000010802	LARP6	63	58.581	ENSXMAG00000021015	larp6a	55	60.442	Xiphophorus_maculatus