EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000011374 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 10811 bases
Position: chrPPEB01009089.1:46459-57269
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000015056	SMN	PF06003.12	5e-133	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000017202	-	1232	-	ENSGAGP00000015056	277 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000011374's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000011374's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000011374	-	98	40.201	ENSGAGG00000013639	-	92	38.974

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000011374	-	97	61.566	ENSG00000172062	SMN1	96	62.909	Homo_sapiens
ENSGAGG00000011374	-	97	61.566	ENSG00000205571	SMN2	96	62.909	Homo_sapiens
ENSGAGG00000011374	-	95	49.822	ENSAPOG00000011324	smn1	96	51.799	Acanthochromis_polyacanthus
ENSGAGG00000011374	-	97	63.214	ENSAMEG00000003316	-	95	62.887	Ailuropoda_melanoleuca
ENSGAGG00000011374	-	91	48.315	ENSACIG00000019772	-	98	49.434	Amphilophus_citrinellus
ENSGAGG00000011374	-	95	49.822	ENSAOCG00000024444	smn1	96	51.439	Amphiprion_ocellaris
ENSGAGG00000011374	-	95	50.534	ENSAPEG00000016504	smn1	96	51.799	Amphiprion_percula
ENSGAGG00000011374	-	93	50.179	ENSATEG00000002182	smn1	81	51.282	Anabas_testudineus
ENSGAGG00000011374	-	69	70.352	ENSAPLG00000010912	-	99	68.342	Anas_platyrhynchos
ENSGAGG00000011374	-	99	74.368	ENSACAG00000010017	-	99	71.841	Anolis_carolinensis
ENSGAGG00000011374	-	97	61.837	ENSANAG00000032133	-	94	60.777	Aotus_nancymaae
ENSGAGG00000011374	-	94	55.390	ENSACLG00000007308	smn1	91	55.390	Astatotilapia_calliptera
ENSGAGG00000011374	-	97	52.482	ENSAMXG00000013884	smn1	99	52.837	Astyanax_mexicanus
ENSGAGG00000011374	-	94	61.397	ENSBTAG00000005743	SMN2	98	59.298	Bos_taurus
ENSGAGG00000011374	-	97	62.411	ENSCJAG00000016290	-	96	63.636	Callithrix_jacchus
ENSGAGG00000011374	-	97	63.441	ENSCAFG00000007812	SMN	99	62.414	Canis_familiaris
ENSGAGG00000011374	-	97	63.441	ENSCAFG00020019229	-	92	62.414	Canis_lupus_dingo
ENSGAGG00000011374	-	94	61.314	ENSCHIG00000015559	-	97	58.763	Capra_hircus
ENSGAGG00000011374	-	99	60.764	ENSTSYG00000012058	-	98	63.953	Carlito_syrichta
ENSGAGG00000011374	-	71	54.902	ENSCAPG00000011021	-	91	55.446	Cavia_aperea
ENSGAGG00000011374	-	96	57.785	ENSCPOG00000012328	-	97	58.478	Cavia_porcellus
ENSGAGG00000011374	-	96	58.741	ENSCPOG00000036973	-	96	59.298	Cavia_porcellus
ENSGAGG00000011374	-	97	61.786	ENSCCAG00000018127	-	96	62.500	Cebus_capucinus
ENSGAGG00000011374	-	97	61.566	ENSCATG00000037002	-	96	62.909	Cercocebus_atys
ENSGAGG00000011374	-	96	58.803	ENSCLAG00000000284	-	96	59.790	Chinchilla_lanigera
ENSGAGG00000011374	-	97	61.922	ENSCSAG00000015688	-	97	61.644	Chlorocebus_sabaeus
ENSGAGG00000011374	-	72	80.000	ENSCHOG00000007346	-	76	83.333	Choloepus_hoffmanni
ENSGAGG00000011374	-	100	96.029	ENSCPBG00000010968	-	99	95.753	Chrysemys_picta_bellii
ENSGAGG00000011374	-	97	62.366	ENSCANG00000038242	-	98	63.370	Colobus_angolensis_palliatus
ENSGAGG00000011374	-	97	55.762	ENSCANG00000033324	-	89	59.925	Colobus_angolensis_palliatus
ENSGAGG00000011374	-	99	57.045	ENSCGRG00001017959	-	98	58.419	Cricetulus_griseus_chok1gshd
ENSGAGG00000011374	-	97	44.404	ENSCGRG00001016998	-	94	42.599	Cricetulus_griseus_chok1gshd
ENSGAGG00000011374	-	99	57.045	ENSCGRG00000007698	Smn1	98	58.419	Cricetulus_griseus_crigri
ENSGAGG00000011374	-	93	48.736	ENSCSEG00000015227	smn1	96	48.746	Cynoglossus_semilaevis
ENSGAGG00000011374	-	95	51.568	ENSCVAG00000007498	smn1	96	50.365	Cyprinodon_variegatus
ENSGAGG00000011374	-	98	53.242	ENSDARG00000018494	smn1	98	52.941	Danio_rerio
ENSGAGG00000011374	-	73	55.882	ENSDNOG00000045949	-	79	56.545	Dasypus_novemcinctus
ENSGAGG00000011374	-	84	59.671	ENSDNOG00000007283	-	99	60.494	Dasypus_novemcinctus
ENSGAGG00000011374	-	94	52.206	ENSDORG00000007082	Smn1	95	53.480	Dipodomys_ordii
ENSGAGG00000011374	-	68	54.167	ENSETEG00000001406	-	92	54.167	Echinops_telfairi
ENSGAGG00000011374	-	94	40.780	ENSEBUG00000011902	smn1	95	38.596	Eptatretus_burgeri
ENSGAGG00000011374	-	88	58.366	ENSEASG00005018000	-	96	56.000	Equus_asinus_asinus
ENSGAGG00000011374	-	97	60.638	ENSECAG00000015215	-	99	60.068	Equus_caballus
ENSGAGG00000011374	-	87	61.600	ENSEEUG00000015777	-	100	59.600	Erinaceus_europaeus
ENSGAGG00000011374	-	98	57.895	ENSELUG00000018067	smn1	99	53.737	Esox_lucius
ENSGAGG00000011374	-	99	61.224	ENSFCAG00000028292	SMN	99	64.835	Felis_catus
ENSGAGG00000011374	-	94	74.242	ENSFALG00000012320	-	95	73.485	Ficedula_albicollis
ENSGAGG00000011374	-	94	60.870	ENSFDAG00000017683	-	96	58.741	Fukomys_damarensis
ENSGAGG00000011374	-	93	51.986	ENSFHEG00000018508	smn1	97	52.941	Fundulus_heteroclitus
ENSGAGG00000011374	-	95	50.752	ENSGMOG00000017279	smn1	94	50.000	Gadus_morhua
ENSGAGG00000011374	-	96	75.655	ENSGALG00000002430	SMN	98	74.400	Gallus_gallus
ENSGAGG00000011374	-	95	56.475	ENSGAFG00000009501	smn1	96	52.708	Gambusia_affinis
ENSGAGG00000011374	-	98	52.708	ENSGACG00000010584	smn1	93	53.731	Gasterosteus_aculeatus
ENSGAGG00000011374	-	91	61.111	ENSGGOG00000003872	-	98	59.160	Gorilla_gorilla
ENSGAGG00000011374	-	65	66.298	ENSGGOG00000026704	-	88	64.398	Gorilla_gorilla
ENSGAGG00000011374	-	98	53.873	ENSHBUG00000013987	smn1	96	56.204	Haplochromis_burtoni
ENSGAGG00000011374	-	94	60.073	ENSHGLG00000001905	-	94	58.974	Heterocephalus_glaber_female
ENSGAGG00000011374	-	96	61.458	ENSHGLG00000001018	-	96	60.069	Heterocephalus_glaber_female
ENSGAGG00000011374	-	96	61.458	ENSHGLG00100011252	-	96	60.069	Heterocephalus_glaber_male
ENSGAGG00000011374	-	92	60.674	ENSHGLG00100018676	-	96	59.551	Heterocephalus_glaber_male
ENSGAGG00000011374	-	96	47.018	ENSHCOG00000017136	smn1	92	47.653	Hippocampus_comes
ENSGAGG00000011374	-	96	52.632	ENSIPUG00000012580	smn1	86	52.650	Ictalurus_punctatus
ENSGAGG00000011374	-	91	61.364	ENSSTOG00000012288	-	94	58.935	Ictidomys_tridecemlineatus
ENSGAGG00000011374	-	60	54.491	ENSJJAG00000014853	-	89	53.107	Jaculus_jaculus
ENSGAGG00000011374	-	95	53.147	ENSKMAG00000007239	smn1	61	56.742	Kryptolebias_marmoratus
ENSGAGG00000011374	-	95	53.147	ENSLBEG00000022550	smn1	96	46.316	Labrus_bergylta
ENSGAGG00000011374	-	94	37.410	ENSLACG00000009808	-	57	36.723	Latimeria_chalumnae
ENSGAGG00000011374	-	95	55.431	ENSLOCG00000011339	smn1	96	57.407	Lepisosteus_oculatus
ENSGAGG00000011374	-	99	61.356	ENSLAFG00000003425	-	95	62.373	Loxodonta_africana
ENSGAGG00000011374	-	97	61.566	ENSMFAG00000031523	SMN1	96	63.636	Macaca_fascicularis
ENSGAGG00000011374	-	97	58.007	ENSMFAG00000008812	-	97	57.877	Macaca_fascicularis
ENSGAGG00000011374	-	97	61.566	ENSMMUG00000020214	SMN1	96	63.636	Macaca_mulatta
ENSGAGG00000011374	-	97	57.295	ENSMMUG00000030594	-	97	57.192	Macaca_mulatta
ENSGAGG00000011374	-	77	50.661	ENSMNEG00000036423	-	87	51.101	Macaca_nemestrina
ENSGAGG00000011374	-	96	61.511	ENSMNEG00000035094	-	96	63.636	Macaca_nemestrina
ENSGAGG00000011374	-	97	61.922	ENSMLEG00000041902	-	96	64.368	Mandrillus_leucophaeus
ENSGAGG00000011374	-	95	53.901	ENSMAMG00000011034	smn1	96	50.896	Mastacembelus_armatus
ENSGAGG00000011374	-	95	54.348	ENSMZEG00005013634	smn1	96	55.839	Maylandia_zebra
ENSGAGG00000011374	-	69	68.229	ENSMGAG00000008889	-	97	65.104	Meleagris_gallopavo
ENSGAGG00000011374	-	99	56.357	ENSMAUG00000010262	Smn1	98	57.388	Mesocricetus_auratus
ENSGAGG00000011374	-	78	60.000	ENSMICG00000034708	-	91	56.962	Microcebus_murinus
ENSGAGG00000011374	-	99	57.241	ENSMOCG00000017833	Smn1	98	57.931	Microtus_ochrogaster
ENSGAGG00000011374	-	95	50.177	ENSMMOG00000005504	smn1	97	51.661	Mola_mola
ENSGAGG00000011374	-	97	70.000	ENSMODG00000001436	-	97	71.071	Monodelphis_domestica
ENSGAGG00000011374	-	95	51.773	ENSMALG00000008025	smn1	96	51.254	Monopterus_albus
ENSGAGG00000011374	-	96	58.451	MGP_CAROLIEiJ_G0018836	Smn1	97	59.155	Mus_caroli
ENSGAGG00000011374	-	99	58.219	ENSMUSG00000021645	Smn1	98	58.904	Mus_musculus
ENSGAGG00000011374	-	99	58.131	MGP_PahariEiJ_G0015911	Smn1	98	58.131	Mus_pahari
ENSGAGG00000011374	-	96	58.099	MGP_SPRETEiJ_G0019718	Smn1	97	58.803	Mus_spretus
ENSGAGG00000011374	-	95	63.082	ENSMPUG00000014470	-	98	63.799	Mustela_putorius_furo
ENSGAGG00000011374	-	97	61.458	ENSMLUG00000010603	-	95	59.136	Myotis_lucifugus
ENSGAGG00000011374	-	94	61.538	ENSNGAG00000019833	Smn1	93	61.172	Nannospalax_galili
ENSGAGG00000011374	-	95	54.122	ENSNBRG00000023000	smn1	96	55.235	Neolamprologus_brichardi
ENSGAGG00000011374	-	99	59.932	ENSNLEG00000004454	-	96	62.545	Nomascus_leucogenys
ENSGAGG00000011374	-	78	69.507	ENSMEUG00000011393	-	100	70.404	Notamacropus_eugenii
ENSGAGG00000011374	-	87	63.922	ENSOPRG00000002015	-	100	63.922	Ochotona_princeps
ENSGAGG00000011374	-	93	59.273	ENSODEG00000015976	-	92	61.977	Octodon_degus
ENSGAGG00000011374	-	95	54.122	ENSONIG00000011799	smn1	96	55.235	Oreochromis_niloticus
ENSGAGG00000011374	-	97	71.691	ENSOANG00000001626	-	98	70.221	Ornithorhynchus_anatinus
ENSGAGG00000011374	-	99	60.071	ENSOCUG00000017097	-	97	59.786	Oryctolagus_cuniculus
ENSGAGG00000011374	-	99	59.028	ENSOCUG00000026649	-	98	58.803	Oryctolagus_cuniculus
ENSGAGG00000011374	-	99	51.020	ENSOCUG00000025183	-	98	51.361	Oryctolagus_cuniculus
ENSGAGG00000011374	-	58	59.877	ENSORLG00000010552	smn1	55	59.877	Oryzias_latipes
ENSGAGG00000011374	-	95	55.303	ENSORLG00020007936	smn1	96	52.273	Oryzias_latipes_hni
ENSGAGG00000011374	-	95	53.901	ENSORLG00015022425	smn1	55	59.259	Oryzias_latipes_hsok
ENSGAGG00000011374	-	55	60.526	ENSOMEG00000007824	smn1	56	59.756	Oryzias_melastigma
ENSGAGG00000011374	-	91	57.196	ENSOGAG00000031414	-	92	55.678	Otolemur_garnettii
ENSGAGG00000011374	-	93	60.370	ENSOARG00000005425	-	97	60.000	Ovis_aries
ENSGAGG00000011374	-	97	61.210	ENSPPAG00000036640	-	96	62.545	Pan_paniscus
ENSGAGG00000011374	-	99	61.565	ENSPPRG00000005575	-	99	64.835	Panthera_pardus
ENSGAGG00000011374	-	99	61.356	ENSPTIG00000007745	-	99	64.835	Panthera_tigris_altaica
ENSGAGG00000011374	-	97	60.915	ENSPTRG00000016955	-	97	61.364	Pan_troglodytes
ENSGAGG00000011374	-	99	60.481	ENSPANG00000013601	-	96	63.636	Papio_anubis
ENSGAGG00000011374	-	97	58.582	ENSPANG00000000253	-	98	58.419	Papio_anubis
ENSGAGG00000011374	-	95	53.558	ENSPKIG00000011096	smn1	96	50.758	Paramormyrops_kingsleyae
ENSGAGG00000011374	-	94	89.655	ENSPSIG00000014787	-	86	89.272	Pelodiscus_sinensis
ENSGAGG00000011374	-	95	52.000	ENSPMGG00000012285	smn1	96	49.810	Periophthalmus_magnuspinnatus
ENSGAGG00000011374	-	94	42.599	ENSPMAG00000005004	smn1	55	43.030	Petromyzon_marinus
ENSGAGG00000011374	-	97	69.892	ENSPCIG00000025764	-	98	71.326	Phascolarctos_cinereus
ENSGAGG00000011374	-	95	56.475	ENSPFOG00000007786	smn1	96	52.708	Poecilia_formosa
ENSGAGG00000011374	-	95	56.835	ENSPLAG00000012071	smn1	95	55.133	Poecilia_latipinna
ENSGAGG00000011374	-	95	56.475	ENSPMEG00000017085	smn1	95	54.753	Poecilia_mexicana
ENSGAGG00000011374	-	95	56.835	ENSPREG00000005824	smn1	96	53.069	Poecilia_reticulata
ENSGAGG00000011374	-	87	48.333	ENSPPYG00000019189	-	73	56.849	Pongo_abelii
ENSGAGG00000011374	-	94	61.029	ENSPPYG00000015533	-	96	62.132	Pongo_abelii
ENSGAGG00000011374	-	93	63.235	ENSPCAG00000004187	-	99	62.500	Procavia_capensis
ENSGAGG00000011374	-	66	64.481	ENSPCOG00000022307	-	74	65.060	Propithecus_coquereli
ENSGAGG00000011374	-	97	62.857	ENSPVAG00000005977	-	97	62.414	Pteropus_vampyrus
ENSGAGG00000011374	-	95	54.122	ENSPNYG00000014148	smn1	96	55.235	Pundamilia_nyererei
ENSGAGG00000011374	-	97	51.943	ENSPNAG00000014007	smn1	86	53.623	Pygocentrus_nattereri
ENSGAGG00000011374	-	99	57.388	ENSRNOG00000018067	Smn1	98	58.763	Rattus_norvegicus
ENSGAGG00000011374	-	91	57.915	ENSRBIG00000036775	-	89	57.143	Rhinopithecus_bieti
ENSGAGG00000011374	-	97	61.922	ENSRBIG00000037052	-	96	63.636	Rhinopithecus_bieti
ENSGAGG00000011374	-	97	54.380	ENSRROG00000031088	-	93	53.731	Rhinopithecus_roxellana
ENSGAGG00000011374	-	97	61.922	ENSRROG00000039399	-	96	63.636	Rhinopithecus_roxellana
ENSGAGG00000011374	-	84	58.498	ENSSBOG00000020112	-	59	64.327	Saimiri_boliviensis_boliviensis
ENSGAGG00000011374	-	97	62.950	ENSSBOG00000011665	-	96	63.636	Saimiri_boliviensis_boliviensis
ENSGAGG00000011374	-	96	70.251	ENSSHAG00000001499	-	95	72.868	Sarcophilus_harrisii
ENSGAGG00000011374	-	95	57.519	ENSSFOG00015015507	smn1	96	58.824	Scleropages_formosus
ENSGAGG00000011374	-	95	50.709	ENSSMAG00000007922	smn1	96	51.264	Scophthalmus_maximus
ENSGAGG00000011374	-	95	49.291	ENSSDUG00000018533	smn1	96	51.971	Seriola_dumerili
ENSGAGG00000011374	-	95	49.645	ENSSLDG00000021135	smn1	96	52.330	Seriola_lalandi_dorsalis
ENSGAGG00000011374	-	100	81.004	ENSSPUG00000000373	-	100	80.645	Sphenodon_punctatus
ENSGAGG00000011374	-	95	53.030	ENSSPAG00000004345	smn1	96	50.360	Stegastes_partitus
ENSGAGG00000011374	-	97	47.985	ENSSSCG00000029127	-	96	46.786	Sus_scrofa
ENSGAGG00000011374	-	73	44.498	ENSSSCG00000033865	-	94	42.365	Sus_scrofa
ENSGAGG00000011374	-	97	63.214	ENSSSCG00000016970	-	99	61.565	Sus_scrofa
ENSGAGG00000011374	-	93	66.052	ENSTGUG00000001548	-	97	65.556	Taeniopygia_guttata
ENSGAGG00000011374	-	97	49.470	ENSTRUG00000000736	smn	98	50.903	Takifugu_rubripes
ENSGAGG00000011374	-	98	46.441	ENSTNIG00000009892	smn1	99	47.902	Tetraodon_nigroviridis
ENSGAGG00000011374	-	65	65.193	ENSTBEG00000002399	-	92	63.542	Tupaia_belangeri
ENSGAGG00000011374	-	94	64.179	ENSTTRG00000005080	-	97	61.620	Tursiops_truncatus
ENSGAGG00000011374	-	65	67.033	ENSUAMG00000024947	-	70	64.583	Ursus_americanus
ENSGAGG00000011374	-	97	63.214	ENSUMAG00000007842	-	73	62.414	Ursus_maritimus
ENSGAGG00000011374	-	91	58.935	ENSVPAG00000009887	-	97	54.945	Vicugna_pacos
ENSGAGG00000011374	-	97	63.441	ENSVVUG00000006934	-	99	62.414	Vulpes_vulpes
ENSGAGG00000011374	-	86	35.075	ENSXETG00000004912	-	79	56.452	Xenopus_tropicalis
ENSGAGG00000011374	-	100	61.131	ENSXETG00000018189	smn2	97	61.484	Xenopus_tropicalis
ENSGAGG00000011374	-	95	56.835	ENSXMAG00000001521	smn1	96	53.069	Xiphophorus_maculatus