EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000011399 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 25792 bases
Position: chrPPEB01006121.1:83799-109590
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000015102	zf-C2H2	PF00096.26	7.9e-50	1	8
ENSGAGP00000015102	zf-C2H2	PF00096.26	7.9e-50	2	8
ENSGAGP00000015102	zf-C2H2	PF00096.26	7.9e-50	3	8
ENSGAGP00000015102	zf-C2H2	PF00096.26	7.9e-50	4	8
ENSGAGP00000015102	zf-C2H2	PF00096.26	7.9e-50	5	8
ENSGAGP00000015102	zf-C2H2	PF00096.26	7.9e-50	6	8
ENSGAGP00000015102	zf-C2H2	PF00096.26	7.9e-50	7	8
ENSGAGP00000015102	zf-C2H2	PF00096.26	7.9e-50	8	8
ENSGAGP00000015104	zf-C2H2	PF00096.26	6.2e-37	1	6
ENSGAGP00000015104	zf-C2H2	PF00096.26	6.2e-37	2	6
ENSGAGP00000015104	zf-C2H2	PF00096.26	6.2e-37	3	6
ENSGAGP00000015104	zf-C2H2	PF00096.26	6.2e-37	4	6
ENSGAGP00000015104	zf-C2H2	PF00096.26	6.2e-37	5	6
ENSGAGP00000015104	zf-C2H2	PF00096.26	6.2e-37	6	6
ENSGAGP00000015102	zf-met	PF12874.7	4.4e-08	1	1
ENSGAGP00000015104	zf-met	PF12874.7	2.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000017254	-	750	-	ENSGAGP00000015104	249 (aa)	-	-
ENSGAGT00000017252	-	903	-	ENSGAGP00000015102	300 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000011399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000011399's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000011399	-	97	50.566	ENSGAGG00000010324	-	72	53.509
ENSGAGG00000011399	-	99	40.171	ENSGAGG00000003095	ZNF865	83	42.079
ENSGAGG00000011399	-	84	57.143	ENSGAGG00000010492	-	79	57.143
ENSGAGG00000011399	-	97	52.047	ENSGAGG00000005331	-	99	52.047
ENSGAGG00000011399	-	91	48.148	ENSGAGG00000017094	-	50	48.148
ENSGAGG00000011399	-	99	53.886	ENSGAGG00000020594	-	94	53.886
ENSGAGG00000011399	-	92	51.724	ENSGAGG00000014356	-	89	51.724
ENSGAGG00000011399	-	90	48.744	ENSGAGG00000013021	-	98	48.744
ENSGAGG00000011399	-	87	59.538	ENSGAGG00000006683	-	95	58.553
ENSGAGG00000011399	-	87	51.037	ENSGAGG00000000971	-	96	50.739
ENSGAGG00000011399	-	96	54.321	ENSGAGG00000015451	-	87	54.321
ENSGAGG00000011399	-	91	57.823	ENSGAGG00000011487	-	78	55.479
ENSGAGG00000011399	-	92	54.839	ENSGAGG00000010833	-	87	54.839
ENSGAGG00000011399	-	90	54.545	ENSGAGG00000005805	-	85	54.545
ENSGAGG00000011399	-	90	55.144	ENSGAGG00000014389	-	96	55.645
ENSGAGG00000011399	-	84	54.913	ENSGAGG00000006960	-	78	55.405
ENSGAGG00000011399	-	84	53.571	ENSGAGG00000002828	-	70	53.571
ENSGAGG00000011399	-	88	50.000	ENSGAGG00000004926	-	96	50.000
ENSGAGG00000011399	-	93	49.029	ENSGAGG00000011366	-	94	50.980
ENSGAGG00000011399	-	84	55.491	ENSGAGG00000009739	-	99	55.491
ENSGAGG00000011399	-	87	47.090	ENSGAGG00000022571	ZNF319	87	47.090
ENSGAGG00000011399	-	84	54.271	ENSGAGG00000012452	-	67	57.798
ENSGAGG00000011399	-	81	53.962	ENSGAGG00000013851	-	72	55.144
ENSGAGG00000011399	-	96	46.667	ENSGAGG00000021327	GFI1B	64	46.667
ENSGAGG00000011399	-	84	59.821	ENSGAGG00000002214	-	82	59.336
ENSGAGG00000011399	-	85	56.452	ENSGAGG00000019349	-	79	56.452
ENSGAGG00000011399	-	95	54.545	ENSGAGG00000006323	-	95	55.372
ENSGAGG00000011399	-	84	56.818	ENSGAGG00000017986	-	90	56.345
ENSGAGG00000011399	-	91	53.719	ENSGAGG00000020134	-	64	53.719
ENSGAGG00000011399	-	95	44.776	ENSGAGG00000018885	-	71	48.560
ENSGAGG00000011399	-	84	54.198	ENSGAGG00000001469	-	91	56.225
ENSGAGG00000011399	-	92	48.718	ENSGAGG00000015232	-	91	51.825
ENSGAGG00000011399	-	90	50.781	ENSGAGG00000020168	-	81	50.000
ENSGAGG00000011399	-	79	49.606	ENSGAGG00000015899	GFI1	100	49.606
ENSGAGG00000011399	-	84	54.310	ENSGAGG00000001645	-	69	53.689
ENSGAGG00000011399	-	89	55.405	ENSGAGG00000001387	-	58	56.931
ENSGAGG00000011399	-	98	56.589	ENSGAGG00000002179	-	93	55.985
ENSGAGG00000011399	-	88	56.164	ENSGAGG00000004740	-	90	56.647
ENSGAGG00000011399	-	96	53.439	ENSGAGG00000009272	-	97	56.627
ENSGAGG00000011399	-	85	37.931	ENSGAGG00000020362	PRDM5	75	35.122
ENSGAGG00000011399	-	83	54.545	ENSGAGG00000007230	-	76	54.545
ENSGAGG00000011399	-	84	57.639	ENSGAGG00000016529	-	94	57.639
ENSGAGG00000011399	-	88	54.772	ENSGAGG00000011574	-	87	52.451
ENSGAGG00000011399	-	85	52.778	ENSGAGG00000018445	-	78	52.778
ENSGAGG00000011399	-	96	53.282	ENSGAGG00000008773	-	92	56.746
ENSGAGG00000011399	-	94	46.774	ENSGAGG00000017640	-	76	46.429
ENSGAGG00000011399	-	88	48.684	ENSGAGG00000003883	ZNF236	63	48.684
ENSGAGG00000011399	-	86	48.529	ENSGAGG00000006848	-	61	47.573
ENSGAGG00000011399	-	94	50.000	ENSGAGG00000006846	-	90	51.020

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000011399	-	86	48.500	ENSACAG00000024956	-	77	50.216	Anolis_carolinensis
ENSGAGG00000011399	-	88	55.758	ENSACAG00000008664	-	68	55.967	Anolis_carolinensis
ENSGAGG00000011399	-	88	46.311	ENSACAG00000024898	-	98	48.756	Anolis_carolinensis
ENSGAGG00000011399	-	84	52.695	ENSAMXG00000042746	-	94	51.835	Astyanax_mexicanus
ENSGAGG00000011399	-	84	52.610	ENSAMXG00000038536	-	94	52.610	Astyanax_mexicanus
ENSGAGG00000011399	-	91	57.143	ENSAMXG00000035246	-	71	57.143	Astyanax_mexicanus
ENSGAGG00000011399	-	83	51.948	ENSAMXG00000042784	-	95	51.948	Astyanax_mexicanus
ENSGAGG00000011399	-	89	51.923	ENSAMXG00000036233	-	85	54.475	Astyanax_mexicanus
ENSGAGG00000011399	-	91	55.159	ENSAMXG00000038636	-	98	55.159	Astyanax_mexicanus
ENSGAGG00000011399	-	91	52.294	ENSAMXG00000032841	-	82	52.294	Astyanax_mexicanus
ENSGAGG00000011399	-	92	52.000	ENSAMXG00000010805	-	98	52.893	Astyanax_mexicanus
ENSGAGG00000011399	-	91	52.709	ENSAMXG00000025452	-	99	56.225	Astyanax_mexicanus
ENSGAGG00000011399	-	95	43.011	ENSAMXG00000040198	-	50	43.860	Astyanax_mexicanus
ENSGAGG00000011399	-	88	50.794	ENSAMXG00000034344	-	81	50.794	Astyanax_mexicanus
ENSGAGG00000011399	-	93	52.743	ENSAMXG00000034847	-	89	52.743	Astyanax_mexicanus
ENSGAGG00000011399	-	85	53.086	ENSAMXG00000038325	-	92	53.086	Astyanax_mexicanus
ENSGAGG00000011399	-	94	47.525	ENSBTAG00000038322	-	85	47.525	Bos_taurus
ENSGAGG00000011399	-	94	95.378	ENSCPBG00000001526	-	94	95.378	Chrysemys_picta_bellii
ENSGAGG00000011399	-	91	44.928	ENSCPBG00000008580	-	77	44.928	Chrysemys_picta_bellii
ENSGAGG00000011399	-	86	51.456	ENSCPBG00000013652	-	70	45.926	Chrysemys_picta_bellii
ENSGAGG00000011399	-	90	56.028	ENSCPBG00000026433	-	53	56.028	Chrysemys_picta_bellii
ENSGAGG00000011399	-	90	47.929	ENSCSAVG00000010960	-	100	48.214	Ciona_savignyi
ENSGAGG00000011399	-	87	47.186	ENSDNOG00000047495	-	81	47.525	Dasypus_novemcinctus
ENSGAGG00000011399	-	98	42.105	ENSEBUG00000013875	-	82	43.796	Eptatretus_burgeri
ENSGAGG00000011399	-	96	50.292	ENSEBUG00000012919	-	73	56.923	Eptatretus_burgeri
ENSGAGG00000011399	-	96	46.983	ENSEBUG00000015837	-	88	49.412	Eptatretus_burgeri
ENSGAGG00000011399	-	86	42.975	ENSEBUG00000014717	-	73	44.724	Eptatretus_burgeri
ENSGAGG00000011399	-	84	55.072	ENSEBUG00000011435	-	86	55.072	Eptatretus_burgeri
ENSGAGG00000011399	-	85	51.807	ENSEBUG00000008306	-	79	52.764	Eptatretus_burgeri
ENSGAGG00000011399	-	91	49.345	ENSEBUG00000005264	-	78	49.751	Eptatretus_burgeri
ENSGAGG00000011399	-	84	50.000	ENSEBUG00000002075	-	76	51.596	Eptatretus_burgeri
ENSGAGG00000011399	-	88	53.247	ENSEBUG00000011694	-	94	54.070	Eptatretus_burgeri
ENSGAGG00000011399	-	84	47.131	ENSEASG00005004469	-	70	47.131	Equus_asinus_asinus
ENSGAGG00000011399	-	98	48.485	ENSFHEG00000004382	-	53	48.485	Fundulus_heteroclitus
ENSGAGG00000011399	-	91	42.857	ENSGMOG00000018506	-	100	42.771	Gadus_morhua
ENSGAGG00000011399	-	89	53.409	ENSGALG00000044069	-	67	56.612	Gallus_gallus
ENSGAGG00000011399	-	89	49.246	ENSGALG00000049609	-	56	49.246	Gallus_gallus
ENSGAGG00000011399	-	89	53.266	ENSGALG00000055127	-	79	53.629	Gallus_gallus
ENSGAGG00000011399	-	85	53.982	ENSGALG00000053507	-	84	52.083	Gallus_gallus
ENSGAGG00000011399	-	95	53.179	ENSGALG00000054325	-	97	53.617	Gallus_gallus
ENSGAGG00000011399	-	85	53.744	ENSGALG00000046336	-	99	53.744	Gallus_gallus
ENSGAGG00000011399	-	83	48.889	ENSGACG00000006283	-	97	50.270	Gasterosteus_aculeatus
ENSGAGG00000011399	-	87	42.292	ENSHCOG00000018201	-	89	44.335	Hippocampus_comes
ENSGAGG00000011399	-	95	52.381	ENSIPUG00000021515	-	94	52.381	Ictalurus_punctatus
ENSGAGG00000011399	-	98	41.199	ENSIPUG00000012109	ZN12	56	45.178	Ictalurus_punctatus
ENSGAGG00000011399	-	91	54.819	ENSIPUG00000015468	-	99	52.439	Ictalurus_punctatus
ENSGAGG00000011399	-	87	47.984	ENSJJAG00000023633	Zfp672	89	48.454	Jaculus_jaculus
ENSGAGG00000011399	-	97	44.068	ENSLACG00000009005	-	100	45.890	Latimeria_chalumnae
ENSGAGG00000011399	-	93	43.363	ENSLACG00000005264	-	98	45.122	Latimeria_chalumnae
ENSGAGG00000011399	-	98	51.031	ENSLACG00000022211	-	86	51.031	Latimeria_chalumnae
ENSGAGG00000011399	-	85	48.361	ENSLOCG00000017864	-	99	48.361	Lepisosteus_oculatus
ENSGAGG00000011399	-	90	41.573	ENSLOCG00000014210	-	55	42.286	Lepisosteus_oculatus
ENSGAGG00000011399	-	85	56.962	ENSMGAG00000013362	-	100	56.962	Meleagris_gallopavo
ENSGAGG00000011399	-	88	48.214	ENSMAUG00000009945	Zfp672	91	49.485	Mesocricetus_auratus
ENSGAGG00000011399	-	86	59.310	ENSMMOG00000003923	-	82	59.310	Mola_mola
ENSGAGG00000011399	-	86	43.825	ENSMODG00000001880	-	80	44.724	Monodelphis_domestica
ENSGAGG00000011399	-	84	46.154	ENSMODG00000010532	-	86	44.898	Monodelphis_domestica
ENSGAGG00000011399	-	83	48.536	MGP_CAROLIEiJ_G0030502	-	63	48.276	Mus_caroli
ENSGAGG00000011399	-	90	48.148	MGP_CAROLIEiJ_G0016391	Zfp672	98	48.000	Mus_caroli
ENSGAGG00000011399	-	85	48.718	ENSMUSG00000030823	9130019O22Rik	67	48.718	Mus_musculus
ENSGAGG00000011399	-	86	47.807	MGP_SPRETEiJ_G0031613	-	86	41.924	Mus_spretus
ENSGAGG00000011399	-	90	48.148	MGP_SPRETEiJ_G0017233	Zfp672	98	46.000	Mus_spretus
ENSGAGG00000011399	-	85	55.634	ENSNGAG00000015777	Zim1	59	52.284	Nannospalax_galili
ENSGAGG00000011399	-	85	44.737	ENSNBRG00000007276	-	59	42.735	Neolamprologus_brichardi
ENSGAGG00000011399	-	86	45.588	ENSNBRG00000000708	-	94	45.545	Neolamprologus_brichardi
ENSGAGG00000011399	-	93	54.938	ENSORLG00020001922	-	85	57.333	Oryzias_latipes_hni
ENSGAGG00000011399	-	87	59.574	ENSOMEG00000001598	-	75	61.719	Oryzias_melastigma
ENSGAGG00000011399	-	84	93.431	ENSPSIG00000000672	-	92	93.431	Pelodiscus_sinensis
ENSGAGG00000011399	-	91	49.735	ENSPSIG00000010328	-	75	49.735	Pelodiscus_sinensis
ENSGAGG00000011399	-	90	57.328	ENSPSIG00000013021	-	77	57.328	Pelodiscus_sinensis
ENSGAGG00000011399	-	90	50.216	ENSPSIG00000004502	-	55	50.216	Pelodiscus_sinensis
ENSGAGG00000011399	-	89	44.118	ENSPSIG00000006586	-	99	44.186	Pelodiscus_sinensis
ENSGAGG00000011399	-	88	51.152	ENSPSIG00000005603	-	67	51.152	Pelodiscus_sinensis
ENSGAGG00000011399	-	91	48.780	ENSPSIG00000003152	-	81	50.435	Pelodiscus_sinensis
ENSGAGG00000011399	-	87	55.618	ENSPSIG00000010248	-	65	55.618	Pelodiscus_sinensis
ENSGAGG00000011399	-	86	52.709	ENSPSIG00000012650	-	78	52.016	Pelodiscus_sinensis
ENSGAGG00000011399	-	84	54.676	ENSPSIG00000006790	-	88	54.676	Pelodiscus_sinensis
ENSGAGG00000011399	-	85	54.187	ENSPSIG00000005672	-	67	54.187	Pelodiscus_sinensis
ENSGAGG00000011399	-	87	51.984	ENSPSIG00000015459	-	70	51.984	Pelodiscus_sinensis
ENSGAGG00000011399	-	84	55.600	ENSPSIG00000016380	-	72	55.600	Pelodiscus_sinensis
ENSGAGG00000011399	-	92	44.656	ENSPREG00000002642	-	91	47.222	Poecilia_reticulata
ENSGAGG00000011399	-	85	48.148	ENSPNYG00000015486	-	51	50.909	Pundamilia_nyererei
ENSGAGG00000011399	-	95	54.348	ENSPNAG00000000088	-	92	50.336	Pygocentrus_nattereri
ENSGAGG00000011399	-	84	54.706	ENSPNAG00000018395	-	59	54.706	Pygocentrus_nattereri
ENSGAGG00000011399	-	97	43.874	ENSRNOG00000002713	Zfp672	92	45.498	Rattus_norvegicus
ENSGAGG00000011399	-	85	43.284	ENSSHAG00000018106	-	76	43.651	Sarcophilus_harrisii
ENSGAGG00000011399	-	98	51.256	ENSSFOG00015019818	-	74	51.327	Scleropages_formosus
ENSGAGG00000011399	-	86	45.185	ENSSMAG00000004252	-	84	45.185	Scophthalmus_maximus
ENSGAGG00000011399	-	94	57.229	ENSSPUG00000004366	-	65	57.229	Sphenodon_punctatus
ENSGAGG00000011399	-	86	54.724	ENSSPUG00000010016	-	93	54.724	Sphenodon_punctatus
ENSGAGG00000011399	-	93	68.182	ENSSPAG00000021653	-	94	68.182	Stegastes_partitus
ENSGAGG00000011399	-	85	59.259	ENSTGUG00000018351	-	99	59.259	Taeniopygia_guttata
ENSGAGG00000011399	-	90	52.764	ENSTGUG00000015210	-	100	53.571	Taeniopygia_guttata
ENSGAGG00000011399	-	91	42.487	ENSTRUG00000022066	-	95	42.487	Takifugu_rubripes
ENSGAGG00000011399	-	86	50.000	ENSXETG00000031192	-	100	50.000	Xenopus_tropicalis
ENSGAGG00000011399	-	85	52.814	ENSXCOG00000006553	-	86	52.814	Xiphophorus_couchianus
ENSGAGG00000011399	-	85	46.000	ENSXMAG00000026680	-	83	46.000	Xiphophorus_maculatus