EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000011487 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 7279 bases
Position: chrPPEB01014210.1:8026-15304
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000015229	zf-C2H2	PF00096.26	1e-56	1	10
ENSGAGP00000015229	zf-C2H2	PF00096.26	1e-56	2	10
ENSGAGP00000015229	zf-C2H2	PF00096.26	1e-56	3	10
ENSGAGP00000015229	zf-C2H2	PF00096.26	1e-56	4	10
ENSGAGP00000015229	zf-C2H2	PF00096.26	1e-56	5	10
ENSGAGP00000015229	zf-C2H2	PF00096.26	1e-56	6	10
ENSGAGP00000015229	zf-C2H2	PF00096.26	1e-56	7	10
ENSGAGP00000015229	zf-C2H2	PF00096.26	1e-56	8	10
ENSGAGP00000015229	zf-C2H2	PF00096.26	1e-56	9	10
ENSGAGP00000015229	zf-C2H2	PF00096.26	1e-56	10	10
ENSGAGP00000015221	zf-C2H2	PF00096.26	1.5e-56	1	10
ENSGAGP00000015221	zf-C2H2	PF00096.26	1.5e-56	2	10
ENSGAGP00000015221	zf-C2H2	PF00096.26	1.5e-56	3	10
ENSGAGP00000015221	zf-C2H2	PF00096.26	1.5e-56	4	10
ENSGAGP00000015221	zf-C2H2	PF00096.26	1.5e-56	5	10
ENSGAGP00000015221	zf-C2H2	PF00096.26	1.5e-56	6	10
ENSGAGP00000015221	zf-C2H2	PF00096.26	1.5e-56	7	10
ENSGAGP00000015221	zf-C2H2	PF00096.26	1.5e-56	8	10
ENSGAGP00000015221	zf-C2H2	PF00096.26	1.5e-56	9	10
ENSGAGP00000015221	zf-C2H2	PF00096.26	1.5e-56	10	10
ENSGAGP00000015224	zf-C2H2	PF00096.26	4e-53	1	9
ENSGAGP00000015224	zf-C2H2	PF00096.26	4e-53	2	9
ENSGAGP00000015224	zf-C2H2	PF00096.26	4e-53	3	9
ENSGAGP00000015224	zf-C2H2	PF00096.26	4e-53	4	9
ENSGAGP00000015224	zf-C2H2	PF00096.26	4e-53	5	9
ENSGAGP00000015224	zf-C2H2	PF00096.26	4e-53	6	9
ENSGAGP00000015224	zf-C2H2	PF00096.26	4e-53	7	9
ENSGAGP00000015224	zf-C2H2	PF00096.26	4e-53	8	9
ENSGAGP00000015224	zf-C2H2	PF00096.26	4e-53	9	9
ENSGAGP00000015224	zf-met	PF12874.7	8.2e-06	1	1
ENSGAGP00000015221	zf-met	PF12874.7	0.00013	1	1
ENSGAGP00000015229	zf-met	PF12874.7	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000017386	-	1197	-	ENSGAGP00000015224	398 (aa)	-	-
ENSGAGT00000017383	-	1275	-	ENSGAGP00000015221	424 (aa)	-	-
ENSGAGT00000017398	-	1347	-	ENSGAGP00000015229	448 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000011487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000011487's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000011487	-	98	89.831	ENSGAGG00000010324	-	98	65.714
ENSGAGG00000011487	-	83	53.247	ENSGAGG00000011366	-	92	53.448
ENSGAGG00000011487	-	83	59.524	ENSGAGG00000017640	-	79	60.465
ENSGAGG00000011487	-	86	57.762	ENSGAGG00000013851	-	92	56.647
ENSGAGG00000011487	-	100	60.656	ENSGAGG00000009272	-	99	61.438
ENSGAGG00000011487	-	92	55.200	ENSGAGG00000018445	-	98	55.200
ENSGAGG00000011487	-	98	63.487	ENSGAGG00000002179	-	100	63.487
ENSGAGG00000011487	-	76	32.903	ENSGAGG00000022082	PRDM15	50	33.333
ENSGAGG00000011487	-	77	53.077	ENSGAGG00000005331	-	80	53.077
ENSGAGG00000011487	-	97	63.235	ENSGAGG00000004740	-	96	67.797
ENSGAGG00000011487	-	73	65.730	ENSGAGG00000000971	-	93	65.730
ENSGAGG00000011487	-	83	74.818	ENSGAGG00000005805	-	100	76.333
ENSGAGG00000011487	-	99	56.818	ENSGAGG00000006960	-	98	57.655
ENSGAGG00000011487	-	87	63.077	ENSGAGG00000002828	-	86	63.077
ENSGAGG00000011487	-	91	61.413	ENSGAGG00000012452	-	93	61.413
ENSGAGG00000011487	-	77	61.638	ENSGAGG00000009739	-	99	61.638
ENSGAGG00000011487	-	78	34.859	ENSGAGG00000020362	PRDM5	87	31.408
ENSGAGG00000011487	-	94	61.455	ENSGAGG00000017986	-	94	62.069
ENSGAGG00000011487	-	84	41.237	ENSGAGG00000022571	ZNF319	99	37.621
ENSGAGG00000011487	-	81	57.738	ENSGAGG00000016529	-	90	58.378
ENSGAGG00000011487	-	84	69.048	ENSGAGG00000010492	-	86	69.048
ENSGAGG00000011487	-	97	68.421	ENSGAGG00000006323	-	92	66.990
ENSGAGG00000011487	-	100	79.245	ENSGAGG00000020594	-	91	79.245
ENSGAGG00000011487	-	77	44.027	ENSGAGG00000017094	-	52	44.654
ENSGAGG00000011487	-	92	55.758	ENSGAGG00000018885	-	81	55.488
ENSGAGG00000011487	-	78	63.245	ENSGAGG00000014389	-	99	63.816
ENSGAGG00000011487	-	100	60.000	ENSGAGG00000010833	-	99	60.465
ENSGAGG00000011487	-	82	55.849	ENSGAGG00000015451	-	88	57.692
ENSGAGG00000011487	-	99	57.196	ENSGAGG00000014356	-	91	58.442
ENSGAGG00000011487	-	84	56.180	ENSGAGG00000001387	-	63	56.081
ENSGAGG00000011487	-	100	59.353	ENSGAGG00000008773	-	99	57.426
ENSGAGG00000011487	-	97	52.500	ENSGAGG00000015200	MYNN	53	52.500
ENSGAGG00000011487	-	93	61.111	ENSGAGG00000006683	-	94	67.857
ENSGAGG00000011487	-	97	78.873	ENSGAGG00000020134	-	95	67.893
ENSGAGG00000011487	-	94	56.784	ENSGAGG00000006846	-	90	56.784
ENSGAGG00000011487	-	84	54.774	ENSGAGG00000006848	-	73	54.774
ENSGAGG00000011487	-	93	54.231	ENSGAGG00000020168	-	80	54.231
ENSGAGG00000011487	-	77	41.860	ENSGAGG00000003095	ZNF865	87	41.860
ENSGAGG00000011487	-	83	57.209	ENSGAGG00000011574	-	99	55.450
ENSGAGG00000011487	-	99	63.607	ENSGAGG00000002214	-	99	64.333
ENSGAGG00000011487	-	79	58.683	ENSGAGG00000015232	-	70	58.683
ENSGAGG00000011487	-	78	55.479	ENSGAGG00000011399	-	91	57.823
ENSGAGG00000011487	-	81	51.205	ENSGAGG00000013021	-	96	51.205
ENSGAGG00000011487	-	75	60.417	ENSGAGG00000007230	-	78	61.411
ENSGAGG00000011487	-	77	54.167	ENSGAGG00000004926	-	99	51.075
ENSGAGG00000011487	-	99	57.951	ENSGAGG00000019349	-	99	59.150
ENSGAGG00000011487	-	99	60.662	ENSGAGG00000001645	-	91	60.662
ENSGAGG00000011487	-	83	59.868	ENSGAGG00000001469	-	100	59.926

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000011487	-	77	62.722	ENSAMXG00000029161	-	87	62.722	Astyanax_mexicanus
ENSGAGG00000011487	-	99	61.056	ENSCPBG00000004030	-	100	61.513	Chrysemys_picta_bellii
ENSGAGG00000011487	-	99	59.200	ENSCPBG00000016841	-	98	62.416	Chrysemys_picta_bellii
ENSGAGG00000011487	-	100	62.295	ENSCPBG00000004990	-	100	64.314	Chrysemys_picta_bellii
ENSGAGG00000011487	-	88	71.429	ENSCPBG00000012976	-	99	62.092	Chrysemys_picta_bellii
ENSGAGG00000011487	-	99	56.985	ENSCPBG00000021479	-	99	58.766	Chrysemys_picta_bellii
ENSGAGG00000011487	-	100	65.049	ENSCPBG00000001272	-	99	65.993	Chrysemys_picta_bellii
ENSGAGG00000011487	-	99	62.215	ENSCPBG00000001421	-	100	62.126	Chrysemys_picta_bellii
ENSGAGG00000011487	-	100	64.324	ENSCPBG00000021487	-	95	64.324	Chrysemys_picta_bellii
ENSGAGG00000011487	-	81	58.712	ENSPSIG00000002569	-	89	54.815	Pelodiscus_sinensis
ENSGAGG00000011487	-	81	54.658	ENSPSIG00000001026	-	93	54.658	Pelodiscus_sinensis
ENSGAGG00000011487	-	80	55.825	ENSPSIG00000000522	-	100	55.825	Pelodiscus_sinensis
ENSGAGG00000011487	-	82	63.636	ENSPSIG00000015216	-	96	54.589	Pelodiscus_sinensis
ENSGAGG00000011487	-	99	56.915	ENSPSIG00000015465	-	99	54.074	Pelodiscus_sinensis
ENSGAGG00000011487	-	98	56.296	ENSPSIG00000009893	-	99	57.534	Pelodiscus_sinensis
ENSGAGG00000011487	-	97	61.481	ENSPSIG00000012865	-	98	61.481	Pelodiscus_sinensis
ENSGAGG00000011487	-	76	60.714	ENSTGUG00000018542	-	99	60.714	Taeniopygia_guttata
ENSGAGG00000011487	-	77	55.319	ENSTGUG00000018374	-	99	55.319	Taeniopygia_guttata
ENSGAGG00000011487	-	73	55.245	ENSTGUG00000015260	-	100	55.245	Taeniopygia_guttata
ENSGAGG00000011487	-	77	61.111	ENSTGUG00000018349	-	100	61.111	Taeniopygia_guttata
ENSGAGG00000011487	-	77	55.801	ENSTGUG00000013736	-	99	58.824	Taeniopygia_guttata
ENSGAGG00000011487	-	77	55.172	ENSTGUG00000014614	-	98	56.667	Taeniopygia_guttata
ENSGAGG00000011487	-	77	57.031	ENSTGUG00000018518	-	100	57.031	Taeniopygia_guttata
ENSGAGG00000011487	-	77	59.333	ENSTGUG00000018327	-	100	60.000	Taeniopygia_guttata
ENSGAGG00000011487	-	77	54.144	ENSTGUG00000016850	-	99	56.111	Taeniopygia_guttata
ENSGAGG00000011487	-	77	54.505	ENSTGUG00000016516	-	99	56.923	Taeniopygia_guttata
ENSGAGG00000011487	-	77	54.639	ENSTGUG00000014888	-	99	56.477	Taeniopygia_guttata
ENSGAGG00000011487	-	77	53.846	ENSTGUG00000016781	-	99	54.275	Taeniopygia_guttata
ENSGAGG00000011487	-	75	53.927	ENSTGUG00000018445	-	93	54.037	Taeniopygia_guttata