EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000011736 (Gene tree)
Gene ID: -
Gene Symbol: SCRT1
Alias: DKFZp547F072|ZNF898
Full Name: scratch family transcriptional repressor 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 2676 bases
Position: chrPPEB01008818.1:10690-13365
Accession: 15950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000015557	zf-C2H2	PF00096.26	2.3e-25	1	4
ENSGAGP00000015557	zf-C2H2	PF00096.26	2.3e-25	2	4
ENSGAGP00000015557	zf-C2H2	PF00096.26	2.3e-25	3	4
ENSGAGP00000015557	zf-C2H2	PF00096.26	2.3e-25	4	4
ENSGAGP00000015557	zf-met	PF12874.7	5.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000017772	SCRT1-201	1468	-	ENSGAGP00000015557	274 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000011736's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000011736's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000011736	SCRT1	96	40.714	ENSGAGG00000000426	SNAI2	99	41.901
ENSGAGG00000011736	SCRT1	52	53.846	ENSGAGG00000023571	SNAI3	51	53.846
ENSGAGG00000011736	SCRT1	80	40.708	ENSGAGG00000022705	SNAI1	90	40.708
ENSGAGG00000011736	SCRT1	97	64.855	ENSGAGG00000020761	SCRT2	96	64.855
ENSGAGG00000011736	SCRT1	78	70.561	ENSGAGG00000020760	-	79	70.561
ENSGAGG00000011736	SCRT1	52	35.374	ENSGAGG00000008124	MAZ	71	32.967

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000011736	SCRT1	99	78.929	ENSAPOG00000015197	-	99	78.929	Acanthochromis_polyacanthus
ENSGAGG00000011736	SCRT1	98	67.148	ENSAPOG00000003680	scrt2	97	67.148	Acanthochromis_polyacanthus
ENSGAGG00000011736	SCRT1	100	85.971	ENSAPOG00000009279	scrt1b	99	85.971	Acanthochromis_polyacanthus
ENSGAGG00000011736	SCRT1	99	76.351	ENSACIG00000006586	-	99	76.351	Amphilophus_citrinellus
ENSGAGG00000011736	SCRT1	97	58.389	ENSACIG00000001296	-	96	58.000	Amphilophus_citrinellus
ENSGAGG00000011736	SCRT1	98	66.426	ENSACIG00000012604	scrt2	97	66.426	Amphilophus_citrinellus
ENSGAGG00000011736	SCRT1	100	82.437	ENSACIG00000013613	scrt1b	99	82.437	Amphilophus_citrinellus
ENSGAGG00000011736	SCRT1	99	76.689	ENSAOCG00000023304	-	99	76.689	Amphiprion_ocellaris
ENSGAGG00000011736	SCRT1	100	85.612	ENSAOCG00000003910	scrt1b	99	85.612	Amphiprion_ocellaris
ENSGAGG00000011736	SCRT1	98	67.148	ENSAOCG00000021557	scrt2	97	67.148	Amphiprion_ocellaris
ENSGAGG00000011736	SCRT1	99	76.689	ENSAPEG00000005677	-	99	76.689	Amphiprion_percula
ENSGAGG00000011736	SCRT1	98	67.148	ENSAPEG00000022558	scrt2	97	67.148	Amphiprion_percula
ENSGAGG00000011736	SCRT1	100	85.612	ENSAPEG00000000869	scrt1b	99	85.612	Amphiprion_percula
ENSGAGG00000011736	SCRT1	98	64.839	ENSATEG00000023998	scrt2	97	64.516	Anabas_testudineus
ENSGAGG00000011736	SCRT1	100	85.252	ENSATEG00000002302	scrt1b	99	85.252	Anabas_testudineus
ENSGAGG00000011736	SCRT1	99	77.857	ENSATEG00000011660	-	99	77.857	Anabas_testudineus
ENSGAGG00000011736	SCRT1	97	53.226	ENSATEG00000003195	-	97	53.226	Anabas_testudineus
ENSGAGG00000011736	SCRT1	78	75.234	ENSACAG00000016109	SCRT2	95	75.234	Anolis_carolinensis
ENSGAGG00000011736	SCRT1	100	84.532	ENSACLG00000007162	scrt1b	99	84.532	Astatotilapia_calliptera
ENSGAGG00000011736	SCRT1	99	73.913	ENSACLG00000012046	-	99	73.913	Astatotilapia_calliptera
ENSGAGG00000011736	SCRT1	99	86.861	ENSAMXG00000038085	scrt1a	98	86.861	Astyanax_mexicanus
ENSGAGG00000011736	SCRT1	89	68.504	ENSAMXG00000034158	scrt2	92	68.504	Astyanax_mexicanus
ENSGAGG00000011736	SCRT1	99	83.333	ENSAMXG00000042624	SCRT1	99	83.333	Astyanax_mexicanus
ENSGAGG00000011736	SCRT1	59	61.728	WBGene00000468	ces-1	60	60.976	Caenorhabditis_elegans
ENSGAGG00000011736	SCRT1	87	63.200	ENSCPBG00000027613	SCRT2	100	63.200	Chrysemys_picta_bellii
ENSGAGG00000011736	SCRT1	100	96.014	ENSCPBG00000018899	SCRT1	99	96.014	Chrysemys_picta_bellii
ENSGAGG00000011736	SCRT1	100	84.173	ENSCSEG00000008596	scrt1b	99	84.173	Cynoglossus_semilaevis
ENSGAGG00000011736	SCRT1	98	65.461	ENSCSEG00000021542	scrt2	97	65.461	Cynoglossus_semilaevis
ENSGAGG00000011736	SCRT1	99	75.676	ENSCSEG00000014892	-	99	75.676	Cynoglossus_semilaevis
ENSGAGG00000011736	SCRT1	98	63.548	ENSCVAG00000021038	scrt2	97	63.548	Cyprinodon_variegatus
ENSGAGG00000011736	SCRT1	100	84.532	ENSCVAG00000009561	scrt1b	99	84.532	Cyprinodon_variegatus
ENSGAGG00000011736	SCRT1	99	76.351	ENSCVAG00000003190	-	99	76.351	Cyprinodon_variegatus
ENSGAGG00000011736	SCRT1	100	87.681	ENSDARG00000100821	scrt1a	99	87.681	Danio_rerio
ENSGAGG00000011736	SCRT1	99	88.000	ENSDARG00000040214	scrt1b	99	88.000	Danio_rerio
ENSGAGG00000011736	SCRT1	99	86.182	ENSELUG00000022228	scrt1a	99	86.182	Esox_lucius
ENSGAGG00000011736	SCRT1	98	62.300	ENSELUG00000023883	scrt2	98	62.783	Esox_lucius
ENSGAGG00000011736	SCRT1	100	88.043	ENSELUG00000005435	scrt1b	99	88.043	Esox_lucius
ENSGAGG00000011736	SCRT1	84	72.294	ENSFALG00000005718	SCRT2	97	71.674	Ficedula_albicollis
ENSGAGG00000011736	SCRT1	98	63.704	ENSFDAG00000008733	SCRT1	98	63.704	Fukomys_damarensis
ENSGAGG00000011736	SCRT1	98	69.424	ENSFHEG00000005732	scrt2	97	69.424	Fundulus_heteroclitus
ENSGAGG00000011736	SCRT1	100	84.173	ENSFHEG00000014820	scrt1b	99	84.173	Fundulus_heteroclitus
ENSGAGG00000011736	SCRT1	99	76.014	ENSFHEG00000009794	-	99	76.014	Fundulus_heteroclitus
ENSGAGG00000011736	SCRT1	99	83.394	ENSGMOG00000000629	scrt1b	99	83.394	Gadus_morhua
ENSGAGG00000011736	SCRT1	58	94.262	ENSGMOG00000013833	-	54	94.262	Gadus_morhua
ENSGAGG00000011736	SCRT1	98	59.677	ENSGMOG00000019519	scrt2	96	59.677	Gadus_morhua
ENSGAGG00000011736	SCRT1	98	65.683	ENSGALG00000028912	SCRT2	97	65.108	Gallus_gallus
ENSGAGG00000011736	SCRT1	98	65.772	ENSGAFG00000003093	scrt2	97	65.772	Gambusia_affinis
ENSGAGG00000011736	SCRT1	99	77.419	ENSGAFG00000009650	-	99	77.419	Gambusia_affinis
ENSGAGG00000011736	SCRT1	100	84.532	ENSGAFG00000007636	scrt1b	99	84.532	Gambusia_affinis
ENSGAGG00000011736	SCRT1	99	81.522	ENSGACG00000008982	scrt1b	99	81.522	Gasterosteus_aculeatus
ENSGAGG00000011736	SCRT1	99	75.000	ENSGACG00000004072	-	99	75.000	Gasterosteus_aculeatus
ENSGAGG00000011736	SCRT1	98	67.148	ENSHBUG00000012492	scrt2	97	67.148	Haplochromis_burtoni
ENSGAGG00000011736	SCRT1	99	76.351	ENSHBUG00000019101	-	99	76.351	Haplochromis_burtoni
ENSGAGG00000011736	SCRT1	100	84.532	ENSHBUG00000016621	scrt1b	99	84.532	Haplochromis_burtoni
ENSGAGG00000011736	SCRT1	100	83.813	ENSHCOG00000016704	scrt1b	99	83.813	Hippocampus_comes
ENSGAGG00000011736	SCRT1	98	63.823	ENSHCOG00000008116	scrt2	97	63.823	Hippocampus_comes
ENSGAGG00000011736	SCRT1	99	71.777	ENSHCOG00000016179	-	98	71.777	Hippocampus_comes
ENSGAGG00000011736	SCRT1	100	85.971	ENSIPUG00000004551	scrt1a	99	85.971	Ictalurus_punctatus
ENSGAGG00000011736	SCRT1	99	79.197	ENSIPUG00000005547	-	99	79.197	Ictalurus_punctatus
ENSGAGG00000011736	SCRT1	51	83.688	ENSSTOG00000032944	SCRT2	80	81.879	Ictidomys_tridecemlineatus
ENSGAGG00000011736	SCRT1	100	84.532	ENSKMAG00000005484	scrt1b	99	84.532	Kryptolebias_marmoratus
ENSGAGG00000011736	SCRT1	98	64.194	ENSKMAG00000018087	scrt2	97	64.194	Kryptolebias_marmoratus
ENSGAGG00000011736	SCRT1	99	74.411	ENSKMAG00000009489	-	99	76.094	Kryptolebias_marmoratus
ENSGAGG00000011736	SCRT1	99	74.915	ENSLBEG00000023388	-	99	75.593	Labrus_bergylta
ENSGAGG00000011736	SCRT1	98	63.666	ENSLBEG00000015419	scrt2	97	64.309	Labrus_bergylta
ENSGAGG00000011736	SCRT1	100	89.855	ENSLACG00000003588	SCRT1	99	89.855	Latimeria_chalumnae
ENSGAGG00000011736	SCRT1	99	54.341	ENSLOCG00000002246	scrt2	98	54.341	Lepisosteus_oculatus
ENSGAGG00000011736	SCRT1	100	89.130	ENSLOCG00000007573	scrt1b	99	89.130	Lepisosteus_oculatus
ENSGAGG00000011736	SCRT1	64	92.593	ENSMFAG00000035496	SCRT1	77	82.317	Macaca_fascicularis
ENSGAGG00000011736	SCRT1	100	84.892	ENSMAMG00000011698	scrt1b	99	84.892	Mastacembelus_armatus
ENSGAGG00000011736	SCRT1	98	63.871	ENSMAMG00000001291	scrt2	97	64.194	Mastacembelus_armatus
ENSGAGG00000011736	SCRT1	99	76.351	ENSMZEG00005026702	-	99	76.351	Maylandia_zebra
ENSGAGG00000011736	SCRT1	100	84.532	ENSMZEG00005005627	scrt1b	99	84.532	Maylandia_zebra
ENSGAGG00000011736	SCRT1	98	67.148	ENSMZEG00005026445	scrt2	97	67.148	Maylandia_zebra
ENSGAGG00000011736	SCRT1	84	71.739	ENSMGAG00000016579	SCRT2	97	71.121	Meleagris_gallopavo
ENSGAGG00000011736	SCRT1	99	76.351	ENSMMOG00000018345	-	99	76.351	Mola_mola
ENSGAGG00000011736	SCRT1	98	63.844	ENSMMOG00000009272	scrt2	97	64.821	Mola_mola
ENSGAGG00000011736	SCRT1	100	83.094	ENSMMOG00000003327	scrt1b	99	83.094	Mola_mola
ENSGAGG00000011736	SCRT1	100	85.252	ENSMALG00000012704	scrt1b	99	85.252	Monopterus_albus
ENSGAGG00000011736	SCRT1	98	66.071	ENSMALG00000013656	scrt2	97	66.071	Monopterus_albus
ENSGAGG00000011736	SCRT1	97	53.383	ENSNGAG00000020815	Scrt2	97	53.137	Nannospalax_galili
ENSGAGG00000011736	SCRT1	100	81.655	ENSNBRG00000013983	scrt1b	99	81.655	Neolamprologus_brichardi
ENSGAGG00000011736	SCRT1	98	66.787	ENSNBRG00000007221	scrt2	97	66.787	Neolamprologus_brichardi
ENSGAGG00000011736	SCRT1	99	76.014	ENSNBRG00000014882	-	99	76.014	Neolamprologus_brichardi
ENSGAGG00000011736	SCRT1	100	83.813	ENSONIG00000006007	scrt1b	99	83.813	Oreochromis_niloticus
ENSGAGG00000011736	SCRT1	98	72.549	ENSONIG00000019809	-	100	72.549	Oreochromis_niloticus
ENSGAGG00000011736	SCRT1	97	61.733	ENSONIG00000003152	-	96	61.733	Oreochromis_niloticus
ENSGAGG00000011736	SCRT1	98	64.194	ENSONIG00000016758	scrt2	97	64.194	Oreochromis_niloticus
ENSGAGG00000011736	SCRT1	98	64.725	ENSORLG00000024051	scrt2	97	64.725	Oryzias_latipes
ENSGAGG00000011736	SCRT1	100	84.892	ENSORLG00000025651	scrt1b	99	84.892	Oryzias_latipes
ENSGAGG00000011736	SCRT1	99	74.074	ENSORLG00000022825	-	98	74.074	Oryzias_latipes
ENSGAGG00000011736	SCRT1	100	84.892	ENSORLG00020012967	scrt1b	99	84.892	Oryzias_latipes_hni
ENSGAGG00000011736	SCRT1	98	64.725	ENSORLG00020011478	scrt2	97	64.725	Oryzias_latipes_hni
ENSGAGG00000011736	SCRT1	98	64.725	ENSORLG00015005524	scrt2	97	64.725	Oryzias_latipes_hsok
ENSGAGG00000011736	SCRT1	100	84.892	ENSORLG00015019165	scrt1b	99	84.892	Oryzias_latipes_hsok
ENSGAGG00000011736	SCRT1	99	73.401	ENSORLG00015010104	-	98	73.401	Oryzias_latipes_hsok
ENSGAGG00000011736	SCRT1	99	77.288	ENSOMEG00000000286	-	99	77.288	Oryzias_melastigma
ENSGAGG00000011736	SCRT1	98	64.725	ENSOMEG00000002661	scrt2	97	64.725	Oryzias_melastigma
ENSGAGG00000011736	SCRT1	100	84.892	ENSOMEG00000003925	scrt1b	99	84.892	Oryzias_melastigma
ENSGAGG00000011736	SCRT1	100	88.043	ENSPKIG00000020085	scrt1a	99	88.043	Paramormyrops_kingsleyae
ENSGAGG00000011736	SCRT1	100	89.130	ENSPKIG00000022303	SCRT1	99	89.130	Paramormyrops_kingsleyae
ENSGAGG00000011736	SCRT1	99	75.601	ENSPMGG00000021402	-	99	75.601	Periophthalmus_magnuspinnatus
ENSGAGG00000011736	SCRT1	98	70.290	ENSPMGG00000016561	scrt2	97	70.290	Periophthalmus_magnuspinnatus
ENSGAGG00000011736	SCRT1	100	81.949	ENSPMGG00000002260	scrt1b	99	81.949	Periophthalmus_magnuspinnatus
ENSGAGG00000011736	SCRT1	100	84.532	ENSPFOG00000017719	scrt1b	99	84.532	Poecilia_formosa
ENSGAGG00000011736	SCRT1	99	76.610	ENSPFOG00000005616	-	99	76.610	Poecilia_formosa
ENSGAGG00000011736	SCRT1	98	63.871	ENSPFOG00000007738	scrt2	97	63.871	Poecilia_formosa
ENSGAGG00000011736	SCRT1	98	69.176	ENSPLAG00000005765	scrt2	97	69.176	Poecilia_latipinna
ENSGAGG00000011736	SCRT1	99	76.610	ENSPLAG00000011718	-	99	76.610	Poecilia_latipinna
ENSGAGG00000011736	SCRT1	100	84.532	ENSPLAG00000009876	scrt1b	99	84.532	Poecilia_latipinna
ENSGAGG00000011736	SCRT1	100	84.532	ENSPMEG00000013274	scrt1b	99	84.532	Poecilia_mexicana
ENSGAGG00000011736	SCRT1	99	76.610	ENSPMEG00000011706	-	99	76.610	Poecilia_mexicana
ENSGAGG00000011736	SCRT1	98	69.176	ENSPMEG00000001538	scrt2	97	69.176	Poecilia_mexicana
ENSGAGG00000011736	SCRT1	100	84.532	ENSPREG00000018985	scrt1b	99	84.532	Poecilia_reticulata
ENSGAGG00000011736	SCRT1	98	63.871	ENSPREG00000001147	scrt2	97	63.871	Poecilia_reticulata
ENSGAGG00000011736	SCRT1	99	75.932	ENSPREG00000012166	-	99	75.932	Poecilia_reticulata
ENSGAGG00000011736	SCRT1	100	84.532	ENSPNYG00000017733	scrt1b	99	84.532	Pundamilia_nyererei
ENSGAGG00000011736	SCRT1	99	76.351	ENSPNYG00000008865	-	99	76.351	Pundamilia_nyererei
ENSGAGG00000011736	SCRT1	98	67.148	ENSPNYG00000013109	scrt2	97	67.148	Pundamilia_nyererei
ENSGAGG00000011736	SCRT1	99	84.000	ENSPNAG00000027880	-	99	84.000	Pygocentrus_nattereri
ENSGAGG00000011736	SCRT1	99	88.321	ENSPNAG00000017415	scrt1a	98	88.321	Pygocentrus_nattereri
ENSGAGG00000011736	SCRT1	100	88.768	ENSSFOG00015001195	SCRT1	99	88.768	Scleropages_formosus
ENSGAGG00000011736	SCRT1	100	84.532	ENSSMAG00000019207	scrt1b	99	84.532	Scophthalmus_maximus
ENSGAGG00000011736	SCRT1	99	74.832	ENSSMAG00000005122	-	99	74.832	Scophthalmus_maximus
ENSGAGG00000011736	SCRT1	100	84.892	ENSSDUG00000007752	scrt1b	99	84.892	Seriola_dumerili
ENSGAGG00000011736	SCRT1	99	76.689	ENSSDUG00000013215	-	99	76.689	Seriola_dumerili
ENSGAGG00000011736	SCRT1	99	64.983	ENSSDUG00000001637	scrt2	96	64.983	Seriola_dumerili
ENSGAGG00000011736	SCRT1	99	76.689	ENSSLDG00000016454	-	99	76.689	Seriola_lalandi_dorsalis
ENSGAGG00000011736	SCRT1	98	64.194	ENSSLDG00000013565	scrt2	97	64.194	Seriola_lalandi_dorsalis
ENSGAGG00000011736	SCRT1	100	84.892	ENSSLDG00000017166	scrt1b	99	84.892	Seriola_lalandi_dorsalis
ENSGAGG00000011736	SCRT1	98	67.159	ENSSPUG00000018637	SCRT2	97	67.159	Sphenodon_punctatus
ENSGAGG00000011736	SCRT1	99	75.000	ENSSPAG00000006788	-	99	76.689	Stegastes_partitus
ENSGAGG00000011736	SCRT1	100	84.892	ENSSPAG00000002200	scrt1b	99	84.892	Stegastes_partitus
ENSGAGG00000011736	SCRT1	98	67.509	ENSSPAG00000014018	scrt2	97	67.509	Stegastes_partitus
ENSGAGG00000011736	SCRT1	84	72.174	ENSTGUG00000006801	SCRT2	99	71.552	Taeniopygia_guttata
ENSGAGG00000011736	SCRT1	98	65.979	ENSTRUG00000007620	scrt2	97	65.979	Takifugu_rubripes
ENSGAGG00000011736	SCRT1	91	74.206	ENSTRUG00000019558	-	85	74.206	Takifugu_rubripes
ENSGAGG00000011736	SCRT1	99	82.971	ENSTRUG00000011637	scrt1b	99	82.971	Takifugu_rubripes
ENSGAGG00000011736	SCRT1	99	76.271	ENSTRUG00000012719	-	99	76.271	Takifugu_rubripes
ENSGAGG00000011736	SCRT1	98	68.571	ENSTNIG00000012473	scrt2	97	68.571	Tetraodon_nigroviridis
ENSGAGG00000011736	SCRT1	100	83.094	ENSTNIG00000018384	scrt1b	99	83.094	Tetraodon_nigroviridis
ENSGAGG00000011736	SCRT1	98	65.772	ENSXCOG00000014367	scrt2	97	65.772	Xiphophorus_couchianus
ENSGAGG00000011736	SCRT1	99	76.703	ENSXCOG00000019861	-	99	76.703	Xiphophorus_couchianus
ENSGAGG00000011736	SCRT1	100	84.532	ENSXCOG00000019675	scrt1b	99	84.532	Xiphophorus_couchianus
ENSGAGG00000011736	SCRT1	100	84.532	ENSXMAG00000027885	scrt1b	99	84.532	Xiphophorus_maculatus
ENSGAGG00000011736	SCRT1	99	76.610	ENSXMAG00000015353	-	99	76.610	Xiphophorus_maculatus
ENSGAGG00000011736	SCRT1	98	63.871	ENSXMAG00000028567	scrt2	97	63.871	Xiphophorus_maculatus