EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000011737 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 41181 bases
Position: chrPPEB01008819.1:1268-42448
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000015559	POP1	PF06978.11	1.3e-38	1	2
ENSGAGP00000015559	POP1	PF06978.11	1.3e-38	2	2
ENSGAGP00000015559	POPLD	PF08170.12	2.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000017774	POP1-201	3830	-	ENSGAGP00000015559	1024 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000011737's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000011737's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000011737	POP1	98	64.147	ENSG00000104356	POP1	100	64.211	Homo_sapiens
ENSGAGG00000011737	POP1	98	49.091	ENSAPOG00000008198	pop1	100	48.393	Acanthochromis_polyacanthus
ENSGAGG00000011737	POP1	98	63.204	ENSAMEG00000000556	POP1	100	63.010	Ailuropoda_melanoleuca
ENSGAGG00000011737	POP1	98	48.123	ENSACIG00000004169	POP1	100	48.123	Amphilophus_citrinellus
ENSGAGG00000011737	POP1	98	48.053	ENSAOCG00000010991	pop1	100	47.859	Amphiprion_ocellaris
ENSGAGG00000011737	POP1	89	47.744	ENSAPEG00000007607	pop1	95	48.672	Amphiprion_percula
ENSGAGG00000011737	POP1	98	48.351	ENSATEG00000024814	POP1	100	48.102	Anabas_testudineus
ENSGAGG00000011737	POP1	90	74.786	ENSAPLG00000014418	POP1	99	74.730	Anas_platyrhynchos
ENSGAGG00000011737	POP1	98	63.143	ENSACAG00000016083	POP1	100	63.010	Anolis_carolinensis
ENSGAGG00000011737	POP1	97	61.821	ENSANAG00000026360	POP1	100	63.222	Aotus_nancymaae
ENSGAGG00000011737	POP1	98	49.808	ENSACLG00000010951	pop1	100	49.284	Astatotilapia_calliptera
ENSGAGG00000011737	POP1	98	47.814	ENSAMXG00000014483	POP1	100	47.477	Astyanax_mexicanus
ENSGAGG00000011737	POP1	98	63.707	ENSBTAG00000012596	POP1	100	63.707	Bos_taurus
ENSGAGG00000011737	POP1	98	63.707	ENSCJAG00000015567	POP1	100	63.356	Callithrix_jacchus
ENSGAGG00000011737	POP1	98	64.059	ENSCAFG00000000469	POP1	100	63.861	Canis_familiaris
ENSGAGG00000011737	POP1	98	63.610	ENSCAFG00020026765	POP1	100	63.415	Canis_lupus_dingo
ENSGAGG00000011737	POP1	98	63.681	ENSCHIG00000017066	POP1	100	63.681	Capra_hircus
ENSGAGG00000011737	POP1	98	62.609	ENSTSYG00000003097	POP1	100	62.705	Carlito_syrichta
ENSGAGG00000011737	POP1	98	61.531	ENSCAPG00000007251	POP1	100	61.138	Cavia_aperea
ENSGAGG00000011737	POP1	98	63.681	ENSCPOG00000002901	POP1	100	63.275	Cavia_porcellus
ENSGAGG00000011737	POP1	98	63.514	ENSCCAG00000018939	POP1	100	63.279	Cebus_capucinus
ENSGAGG00000011737	POP1	98	64.147	ENSCATG00000040916	POP1	100	63.953	Cercocebus_atys
ENSGAGG00000011737	POP1	99	63.071	ENSCLAG00000007208	POP1	97	62.669	Chinchilla_lanigera
ENSGAGG00000011737	POP1	88	67.064	ENSCSAG00000012340	POP1	99	67.064	Chlorocebus_sabaeus
ENSGAGG00000011737	POP1	90	61.955	ENSCHOG00000011432	POP1	96	62.433	Choloepus_hoffmanni
ENSGAGG00000011737	POP1	98	92.460	ENSCPBG00000006373	POP1	100	92.460	Chrysemys_picta_bellii
ENSGAGG00000011737	POP1	79	38.956	ENSCING00000008323	-	87	38.956	Ciona_intestinalis
ENSGAGG00000011737	POP1	98	64.341	ENSCANG00000001647	POP1	100	64.147	Colobus_angolensis_palliatus
ENSGAGG00000011737	POP1	98	61.203	ENSCGRG00001017308	Pop1	100	61.359	Cricetulus_griseus_chok1gshd
ENSGAGG00000011737	POP1	98	56.838	ENSCGRG00000010824	Pop1	100	57.561	Cricetulus_griseus_crigri
ENSGAGG00000011737	POP1	98	47.409	ENSCSEG00000008737	POP1	100	47.546	Cynoglossus_semilaevis
ENSGAGG00000011737	POP1	98	48.799	ENSCVAG00000022248	pop1	100	48.752	Cyprinodon_variegatus
ENSGAGG00000011737	POP1	98	60.927	ENSDNOG00000019974	POP1	100	60.738	Dasypus_novemcinctus
ENSGAGG00000011737	POP1	98	54.078	ENSDORG00000015384	Pop1	100	54.730	Dipodomys_ordii
ENSGAGG00000011737	POP1	61	34.639	FBgn0026702	l(1)G0045	97	30.380	Drosophila_melanogaster
ENSGAGG00000011737	POP1	87	57.391	ENSETEG00000007839	POP1	88	57.043	Echinops_telfairi
ENSGAGG00000011737	POP1	99	63.138	ENSEASG00005003189	POP1	99	62.644	Equus_asinus_asinus
ENSGAGG00000011737	POP1	98	63.415	ENSECAG00000024236	POP1	100	62.913	Equus_caballus
ENSGAGG00000011737	POP1	58	57.399	ENSEEUG00000003050	-	55	86.747	Erinaceus_europaeus
ENSGAGG00000011737	POP1	98	48.833	ENSELUG00000003526	pop1	100	48.491	Esox_lucius
ENSGAGG00000011737	POP1	98	64.175	ENSFCAG00000002168	POP1	100	64.466	Felis_catus
ENSGAGG00000011737	POP1	98	71.554	ENSFALG00000005711	POP1	100	72.043	Ficedula_albicollis
ENSGAGG00000011737	POP1	98	63.398	ENSFDAG00000017068	POP1	100	63.188	Fukomys_damarensis
ENSGAGG00000011737	POP1	98	48.170	ENSFHEG00000019518	pop1	100	48.256	Fundulus_heteroclitus
ENSGAGG00000011737	POP1	90	48.063	ENSGMOG00000000659	POP1	95	48.349	Gadus_morhua
ENSGAGG00000011737	POP1	98	49.125	ENSGAFG00000019770	POP1	100	48.833	Gambusia_affinis
ENSGAGG00000011737	POP1	98	45.841	ENSGACG00000003499	pop1	100	45.498	Gasterosteus_aculeatus
ENSGAGG00000011737	POP1	98	63.725	ENSGGOG00000003176	POP1	100	64.050	Gorilla_gorilla
ENSGAGG00000011737	POP1	98	49.520	ENSHBUG00000021583	pop1	100	49.094	Haplochromis_burtoni
ENSGAGG00000011737	POP1	98	63.663	ENSHGLG00000006029	POP1	100	63.259	Heterocephalus_glaber_female
ENSGAGG00000011737	POP1	98	63.663	ENSHGLG00100016879	POP1	100	63.259	Heterocephalus_glaber_male
ENSGAGG00000011737	POP1	89	48.666	ENSHCOG00000013888	pop1	97	48.666	Hippocampus_comes
ENSGAGG00000011737	POP1	98	44.796	ENSIPUG00000018336	pop1	100	44.517	Ictalurus_punctatus
ENSGAGG00000011737	POP1	98	64.791	ENSSTOG00000011455	POP1	97	64.597	Ictidomys_tridecemlineatus
ENSGAGG00000011737	POP1	98	61.220	ENSJJAG00000013325	Pop1	100	60.802	Jaculus_jaculus
ENSGAGG00000011737	POP1	98	48.544	ENSKMAG00000001346	POP1	100	48.882	Kryptolebias_marmoratus
ENSGAGG00000011737	POP1	87	49.890	ENSLBEG00000024457	POP1	95	49.677	Labrus_bergylta
ENSGAGG00000011737	POP1	91	59.114	ENSLACG00000012498	POP1	97	60.064	Latimeria_chalumnae
ENSGAGG00000011737	POP1	98	50.824	ENSLOCG00000009817	POP1	100	51.212	Lepisosteus_oculatus
ENSGAGG00000011737	POP1	98	64.147	ENSLAFG00000010770	POP1	100	63.953	Loxodonta_africana
ENSGAGG00000011737	POP1	98	64.535	ENSMFAG00000000347	POP1	100	64.341	Macaca_fascicularis
ENSGAGG00000011737	POP1	98	64.438	ENSMNEG00000036870	POP1	100	64.244	Macaca_nemestrina
ENSGAGG00000011737	POP1	98	64.438	ENSMLEG00000034986	POP1	100	64.244	Mandrillus_leucophaeus
ENSGAGG00000011737	POP1	98	48.855	ENSMAMG00000004040	pop1	100	49.042	Mastacembelus_armatus
ENSGAGG00000011737	POP1	98	49.615	ENSMZEG00005025448	pop1	100	49.188	Maylandia_zebra
ENSGAGG00000011737	POP1	98	68.851	ENSMGAG00000012167	POP1	100	69.136	Meleagris_gallopavo
ENSGAGG00000011737	POP1	98	62.341	ENSMAUG00000017537	Pop1	100	62.341	Mesocricetus_auratus
ENSGAGG00000011737	POP1	98	63.733	ENSMICG00000004361	POP1	100	63.426	Microcebus_murinus
ENSGAGG00000011737	POP1	98	61.501	ENSMOCG00000006356	Pop1	100	61.538	Microtus_ochrogaster
ENSGAGG00000011737	POP1	89	47.072	ENSMMOG00000018242	pop1	93	47.572	Mola_mola
ENSGAGG00000011737	POP1	98	65.470	ENSMODG00000006561	POP1	100	66.052	Monodelphis_domestica
ENSGAGG00000011737	POP1	98	50.000	ENSMALG00000012621	POP1	100	48.986	Monopterus_albus
ENSGAGG00000011737	POP1	98	61.089	MGP_CAROLIEiJ_G0019726	Pop1	100	60.794	Mus_caroli
ENSGAGG00000011737	POP1	98	61.300	ENSMUSG00000022325	Pop1	100	60.714	Mus_musculus
ENSGAGG00000011737	POP1	98	60.759	MGP_PahariEiJ_G0019735	Pop1	100	60.271	Mus_pahari
ENSGAGG00000011737	POP1	98	61.284	MGP_SPRETEiJ_G0020622	Pop1	100	60.987	Mus_spretus
ENSGAGG00000011737	POP1	98	63.575	ENSMPUG00000015250	POP1	100	63.382	Mustela_putorius_furo
ENSGAGG00000011737	POP1	98	61.501	ENSMLUG00000010204	POP1	100	61.306	Myotis_lucifugus
ENSGAGG00000011737	POP1	98	62.392	ENSNGAG00000001582	Pop1	100	62.162	Nannospalax_galili
ENSGAGG00000011737	POP1	87	49.781	ENSNBRG00000002356	pop1	94	49.946	Neolamprologus_brichardi
ENSGAGG00000011737	POP1	98	63.953	ENSNLEG00000002541	POP1	100	63.760	Nomascus_leucogenys
ENSGAGG00000011737	POP1	91	57.579	ENSMEUG00000003118	POP1	98	57.579	Notamacropus_eugenii
ENSGAGG00000011737	POP1	98	61.404	ENSOPRG00000007667	POP1	100	60.815	Ochotona_princeps
ENSGAGG00000011737	POP1	98	61.353	ENSODEG00000003984	POP1	100	61.937	Octodon_degus
ENSGAGG00000011737	POP1	98	49.473	ENSONIG00000016445	pop1	100	49.238	Oreochromis_niloticus
ENSGAGG00000011737	POP1	60	63.529	ENSOANG00000001278	-	94	66.471	Ornithorhynchus_anatinus
ENSGAGG00000011737	POP1	98	62.838	ENSOCUG00000017400	POP1	100	61.700	Oryctolagus_cuniculus
ENSGAGG00000011737	POP1	98	48.438	ENSORLG00000002839	pop1	100	48.387	Oryzias_latipes
ENSGAGG00000011737	POP1	88	50.382	ENSORLG00020022450	POP1	96	50.491	Oryzias_latipes_hni
ENSGAGG00000011737	POP1	98	48.833	ENSORLG00015012746	POP1	100	48.535	Oryzias_latipes_hsok
ENSGAGG00000011737	POP1	98	49.559	ENSOMEG00000006915	pop1	100	49.414	Oryzias_melastigma
ENSGAGG00000011737	POP1	98	62.681	ENSOGAG00000001466	POP1	100	62.800	Otolemur_garnettii
ENSGAGG00000011737	POP1	98	64.147	ENSPPAG00000018410	POP1	100	63.953	Pan_paniscus
ENSGAGG00000011737	POP1	98	63.946	ENSPPRG00000005002	POP1	100	64.043	Panthera_pardus
ENSGAGG00000011737	POP1	98	64.043	ENSPTIG00000016527	POP1	100	64.237	Panthera_tigris_altaica
ENSGAGG00000011737	POP1	98	64.244	ENSPTRG00000020458	POP1	100	64.050	Pan_troglodytes
ENSGAGG00000011737	POP1	98	64.438	ENSPANG00000009704	POP1	100	64.244	Papio_anubis
ENSGAGG00000011737	POP1	98	50.243	ENSPKIG00000016325	POP1	100	49.661	Paramormyrops_kingsleyae
ENSGAGG00000011737	POP1	98	84.729	ENSPSIG00000012343	POP1	100	84.729	Pelodiscus_sinensis
ENSGAGG00000011737	POP1	88	50.000	ENSPMGG00000022253	POP1	95	50.853	Periophthalmus_magnuspinnatus
ENSGAGG00000011737	POP1	98	61.143	ENSPEMG00000023633	Pop1	100	60.853	Peromyscus_maniculatus_bairdii
ENSGAGG00000011737	POP1	88	43.704	ENSPMAG00000003209	POP1	100	44.105	Petromyzon_marinus
ENSGAGG00000011737	POP1	98	64.341	ENSPCIG00000012216	POP1	100	64.535	Phascolarctos_cinereus
ENSGAGG00000011737	POP1	98	49.516	ENSPFOG00000012490	POP1	100	49.319	Poecilia_formosa
ENSGAGG00000011737	POP1	98	49.128	ENSPLAG00000004646	POP1	100	48.930	Poecilia_latipinna
ENSGAGG00000011737	POP1	98	49.319	ENSPMEG00000019592	POP1	100	48.835	Poecilia_mexicana
ENSGAGG00000011737	POP1	98	49.610	ENSPREG00000020951	POP1	100	49.367	Poecilia_reticulata
ENSGAGG00000011737	POP1	98	64.244	ENSPPYG00000018777	POP1	100	64.050	Pongo_abelii
ENSGAGG00000011737	POP1	98	60.485	ENSPCAG00000016662	POP1	100	60.193	Procavia_capensis
ENSGAGG00000011737	POP1	98	64.120	ENSPCOG00000019420	POP1	100	63.926	Propithecus_coquereli
ENSGAGG00000011737	POP1	98	62.682	ENSPVAG00000014468	POP1	100	63.010	Pteropus_vampyrus
ENSGAGG00000011737	POP1	87	50.662	ENSPNYG00000004476	pop1	95	50.983	Pundamilia_nyererei
ENSGAGG00000011737	POP1	98	46.283	ENSPNAG00000000265	pop1	100	46.269	Pygocentrus_nattereri
ENSGAGG00000011737	POP1	98	61.868	ENSRNOG00000005243	Pop1	100	61.132	Rattus_norvegicus
ENSGAGG00000011737	POP1	98	64.189	ENSRBIG00000007996	POP1	100	63.996	Rhinopithecus_bieti
ENSGAGG00000011737	POP1	98	64.286	ENSRROG00000012334	POP1	100	64.093	Rhinopithecus_roxellana
ENSGAGG00000011737	POP1	97	63.539	ENSSBOG00000020830	POP1	100	64.125	Saimiri_boliviensis_boliviensis
ENSGAGG00000011737	POP1	98	64.597	ENSSHAG00000000296	POP1	100	64.597	Sarcophilus_harrisii
ENSGAGG00000011737	POP1	99	48.359	ENSSFOG00015007429	pop1	99	48.166	Scleropages_formosus
ENSGAGG00000011737	POP1	89	49.467	ENSSMAG00000010467	POP1	95	50.972	Scophthalmus_maximus
ENSGAGG00000011737	POP1	98	47.992	ENSSDUG00000007817	POP1	100	47.992	Seriola_dumerili
ENSGAGG00000011737	POP1	98	48.279	ENSSLDG00000012565	POP1	100	48.569	Seriola_lalandi_dorsalis
ENSGAGG00000011737	POP1	98	71.415	ENSSPUG00000003550	-	100	71.024	Sphenodon_punctatus
ENSGAGG00000011737	POP1	91	50.158	ENSSPAG00000014955	pop1	94	51.313	Stegastes_partitus
ENSGAGG00000011737	POP1	98	63.050	ENSSSCG00000006078	POP1	100	63.235	Sus_scrofa
ENSGAGG00000011737	POP1	90	64.255	ENSTGUG00000012011	-	99	64.163	Taeniopygia_guttata
ENSGAGG00000011737	POP1	87	49.724	ENSTRUG00000010856	pop1	92	49.724	Takifugu_rubripes
ENSGAGG00000011737	POP1	89	49.790	ENSTNIG00000013297	pop1	97	50.318	Tetraodon_nigroviridis
ENSGAGG00000011737	POP1	90	62.142	ENSTBEG00000014214	POP1	95	63.130	Tupaia_belangeri
ENSGAGG00000011737	POP1	98	62.281	ENSTTRG00000016071	POP1	100	62.086	Tursiops_truncatus
ENSGAGG00000011737	POP1	97	62.562	ENSUAMG00000017309	POP1	100	62.660	Ursus_americanus
ENSGAGG00000011737	POP1	98	62.863	ENSUMAG00000016952	POP1	100	68.110	Ursus_maritimus
ENSGAGG00000011737	POP1	82	67.335	ENSVPAG00000008278	POP1	82	67.335	Vicugna_pacos
ENSGAGG00000011737	POP1	98	63.610	ENSVVUG00000010994	POP1	100	63.415	Vulpes_vulpes
ENSGAGG00000011737	POP1	98	44.596	ENSXCOG00000017043	POP1	100	44.434	Xiphophorus_couchianus
ENSGAGG00000011737	POP1	98	48.970	ENSXMAG00000002472	POP1	100	48.381	Xiphophorus_maculatus