EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000011748 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 20485 bases
Position: chrPPEB01008820.1:10240-30724
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000015580	RRM_1	PF00076.22	2.3e-33	1	3
ENSGAGP00000015580	RRM_1	PF00076.22	2.3e-33	2	3
ENSGAGP00000015580	RRM_1	PF00076.22	2.3e-33	3	3
ENSGAGP00000015576	RRM_1	PF00076.22	4.5e-33	1	3
ENSGAGP00000015576	RRM_1	PF00076.22	4.5e-33	2	3
ENSGAGP00000015576	RRM_1	PF00076.22	4.5e-33	3	3
ENSGAGP00000015579	RRM_1	PF00076.22	4.6e-33	1	3
ENSGAGP00000015579	RRM_1	PF00076.22	4.6e-33	2	3
ENSGAGP00000015579	RRM_1	PF00076.22	4.6e-33	3	3
ENSGAGP00000015571	RRM_1	PF00076.22	5.2e-33	1	3
ENSGAGP00000015571	RRM_1	PF00076.22	5.2e-33	2	3
ENSGAGP00000015571	RRM_1	PF00076.22	5.2e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000017792	-	3220	-	ENSGAGP00000015576	734 (aa)	-	-
ENSGAGT00000017795	-	3217	-	ENSGAGP00000015579	733 (aa)	-	-
ENSGAGT00000017787	-	3301	-	ENSGAGP00000015571	761 (aa)	-	-
ENSGAGT00000017796	-	2860	-	ENSGAGP00000015580	614 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000011748's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000011748's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000011748	-	93	54.126	ENSGAGG00000018767	RAVER2	99	52.174

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000011748	-	96	76.344	ENSG00000161847	RAVER1	96	63.685	Homo_sapiens
ENSGAGG00000011748	-	95	69.086	ENSAPOG00000017267	raver1	73	69.086	Acanthochromis_polyacanthus
ENSGAGG00000011748	-	96	74.462	ENSAMEG00000011738	RAVER1	94	61.949	Ailuropoda_melanoleuca
ENSGAGG00000011748	-	95	68.817	ENSAOCG00000005128	raver1	77	68.817	Amphiprion_ocellaris
ENSGAGG00000011748	-	96	68.817	ENSAPEG00000010854	raver1	80	68.817	Amphiprion_percula
ENSGAGG00000011748	-	98	67.273	ENSATEG00000021004	raver1	80	68.817	Anabas_testudineus
ENSGAGG00000011748	-	84	80.547	ENSACAG00000008386	-	91	80.220	Anolis_carolinensis
ENSGAGG00000011748	-	96	76.344	ENSANAG00000028226	RAVER1	94	62.968	Aotus_nancymaae
ENSGAGG00000011748	-	96	68.633	ENSACLG00000018492	raver1	79	66.220	Astatotilapia_calliptera
ENSGAGG00000011748	-	80	90.000	ENSAMXG00000005132	raver1	91	60.134	Astyanax_mexicanus
ENSGAGG00000011748	-	97	77.480	ENSBTAG00000015721	RAVER1	90	78.841	Bos_taurus
ENSGAGG00000011748	-	96	76.344	ENSCJAG00000005671	RAVER1	94	63.102	Callithrix_jacchus
ENSGAGG00000011748	-	96	77.151	ENSCAFG00000017861	RAVER1	94	65.331	Canis_familiaris
ENSGAGG00000011748	-	96	77.151	ENSCAFG00020024449	RAVER1	96	65.331	Canis_lupus_dingo
ENSGAGG00000011748	-	96	77.151	ENSCHIG00000006718	RAVER1	80	78.551	Capra_hircus
ENSGAGG00000011748	-	86	77.151	ENSTSYG00000027107	RAVER1	100	62.996	Carlito_syrichta
ENSGAGG00000011748	-	83	78.095	ENSCAPG00000002269	RAVER1	100	61.080	Cavia_aperea
ENSGAGG00000011748	-	93	78.324	ENSCPOG00000001008	RAVER1	96	62.166	Cavia_porcellus
ENSGAGG00000011748	-	96	76.075	ENSCCAG00000031723	RAVER1	94	62.918	Cebus_capucinus
ENSGAGG00000011748	-	96	78.144	ENSCATG00000043863	RAVER1	94	63.588	Cercocebus_atys
ENSGAGG00000011748	-	96	77.937	ENSCLAG00000009336	RAVER1	81	77.971	Chinchilla_lanigera
ENSGAGG00000011748	-	96	76.613	ENSCSAG00000007317	RAVER1	67	77.971	Chlorocebus_sabaeus
ENSGAGG00000011748	-	100	95.806	ENSCPBG00000005349	-	100	95.282	Chrysemys_picta_bellii
ENSGAGG00000011748	-	96	78.144	ENSCANG00000008337	RAVER1	94	63.588	Colobus_angolensis_palliatus
ENSGAGG00000011748	-	96	76.344	ENSCGRG00001013260	-	96	62.051	Cricetulus_griseus_chok1gshd
ENSGAGG00000011748	-	96	76.344	ENSCGRG00000015138	-	96	62.051	Cricetulus_griseus_crigri
ENSGAGG00000011748	-	96	67.473	ENSCSEG00000021092	raver1	81	67.473	Cynoglossus_semilaevis
ENSGAGG00000011748	-	96	68.280	ENSCVAG00000013971	raver1	80	68.280	Cyprinodon_variegatus
ENSGAGG00000011748	-	96	59.465	ENSDARG00000052617	raver1	89	57.461	Danio_rerio
ENSGAGG00000011748	-	75	70.607	ENSDNOG00000035742	-	59	77.228	Dasypus_novemcinctus
ENSGAGG00000011748	-	98	66.584	ENSDORG00000010106	-	83	72.881	Dipodomys_ordii
ENSGAGG00000011748	-	55	75.000	ENSETEG00000008201	-	72	75.000	Echinops_telfairi
ENSGAGG00000011748	-	66	34.498	ENSEBUG00000003030	RAVER1	53	34.848	Eptatretus_burgeri
ENSGAGG00000011748	-	56	90.625	ENSEASG00005010544	-	83	75.000	Equus_asinus_asinus
ENSGAGG00000011748	-	96	76.613	ENSECAG00000024966	RAVER1	94	62.884	Equus_caballus
ENSGAGG00000011748	-	93	67.536	ENSELUG00000023287	raver1	89	60.586	Esox_lucius
ENSGAGG00000011748	-	96	76.882	ENSFCAG00000009435	RAVER1	82	76.786	Felis_catus
ENSGAGG00000011748	-	93	78.198	ENSFDAG00000015113	RAVER1	96	61.867	Fukomys_damarensis
ENSGAGG00000011748	-	97	52.473	ENSGMOG00000003649	raver1	96	52.342	Gadus_morhua
ENSGAGG00000011748	-	79	41.809	ENSGALG00000050608	-	58	41.924	Gallus_gallus
ENSGAGG00000011748	-	97	67.287	ENSGAFG00000015944	raver1	80	67.742	Gambusia_affinis
ENSGAGG00000011748	-	95	67.039	ENSGACG00000013818	raver1	86	69.003	Gasterosteus_aculeatus
ENSGAGG00000011748	-	96	76.344	ENSGGOG00000006015	RAVER1	94	63.818	Gorilla_gorilla
ENSGAGG00000011748	-	95	68.633	ENSHBUG00000021210	raver1	79	66.220	Haplochromis_burtoni
ENSGAGG00000011748	-	93	78.261	ENSHGLG00000015460	RAVER1	96	62.051	Heterocephalus_glaber_female
ENSGAGG00000011748	-	93	78.261	ENSHGLG00100000812	RAVER1	96	62.051	Heterocephalus_glaber_male
ENSGAGG00000011748	-	96	68.280	ENSHCOG00000000449	raver1	87	61.503	Hippocampus_comes
ENSGAGG00000011748	-	96	63.728	ENSIPUG00000013153	raver1	83	65.239	Ictalurus_punctatus
ENSGAGG00000011748	-	96	76.944	ENSSTOG00000003241	RAVER1	96	64.209	Ictidomys_tridecemlineatus
ENSGAGG00000011748	-	96	78.022	ENSJJAG00000018219	-	96	63.867	Jaculus_jaculus
ENSGAGG00000011748	-	99	62.759	ENSKMAG00000017355	raver1	84	64.878	Kryptolebias_marmoratus
ENSGAGG00000011748	-	87	68.063	ENSLBEG00000008268	raver1	75	69.086	Labrus_bergylta
ENSGAGG00000011748	-	89	81.818	ENSLACG00000005809	-	84	81.818	Latimeria_chalumnae
ENSGAGG00000011748	-	96	69.474	ENSLOCG00000007500	raver1	92	58.847	Lepisosteus_oculatus
ENSGAGG00000011748	-	96	76.882	ENSLAFG00000003664	-	98	74.390	Loxodonta_africana
ENSGAGG00000011748	-	96	78.144	ENSMFAG00000037977	RAVER1	94	63.588	Macaca_fascicularis
ENSGAGG00000011748	-	96	76.613	ENSMMUG00000014897	RAVER1	90	73.913	Macaca_mulatta
ENSGAGG00000011748	-	96	78.144	ENSMNEG00000028390	RAVER1	94	63.588	Macaca_nemestrina
ENSGAGG00000011748	-	96	78.144	ENSMLEG00000041959	RAVER1	94	63.454	Mandrillus_leucophaeus
ENSGAGG00000011748	-	97	67.792	ENSMAMG00000012059	raver1	80	68.817	Mastacembelus_armatus
ENSGAGG00000011748	-	96	68.633	ENSMZEG00005019002	raver1	80	68.633	Maylandia_zebra
ENSGAGG00000011748	-	96	76.676	ENSMAUG00000017948	-	96	63.249	Mesocricetus_auratus
ENSGAGG00000011748	-	96	77.419	ENSMICG00000010326	RAVER1	96	65.455	Microcebus_murinus
ENSGAGG00000011748	-	96	76.344	ENSMOCG00000015553	-	96	62.051	Microtus_ochrogaster
ENSGAGG00000011748	-	96	68.011	ENSMMOG00000012093	raver1	80	68.011	Mola_mola
ENSGAGG00000011748	-	93	76.500	ENSMODG00000005584	-	85	68.300	Monodelphis_domestica
ENSGAGG00000011748	-	93	66.667	ENSMALG00000016569	raver1	83	64.573	Monopterus_albus
ENSGAGG00000011748	-	95	75.967	MGP_CAROLIEiJ_G0031860	-	96	62.384	Mus_caroli
ENSGAGG00000011748	-	95	76.685	ENSMUSG00000010205	Raver1	96	62.119	Mus_musculus
ENSGAGG00000011748	-	93	77.364	MGP_PahariEiJ_G0014726	-	96	61.660	Mus_pahari
ENSGAGG00000011748	-	95	76.685	MGP_SPRETEiJ_G0032984	-	96	61.987	Mus_spretus
ENSGAGG00000011748	-	96	77.297	ENSMPUG00000006712	RAVER1	94	62.617	Mustela_putorius_furo
ENSGAGG00000011748	-	96	77.151	ENSMLUG00000012328	RAVER1	96	64.917	Myotis_lucifugus
ENSGAGG00000011748	-	96	74.799	ENSNGAG00000001260	-	96	62.834	Nannospalax_galili
ENSGAGG00000011748	-	96	57.803	ENSNBRG00000010139	raver1	91	48.133	Neolamprologus_brichardi
ENSGAGG00000011748	-	96	76.075	ENSNLEG00000012181	RAVER1	94	63.551	Nomascus_leucogenys
ENSGAGG00000011748	-	89	79.331	ENSMEUG00000003281	-	83	81.457	Notamacropus_eugenii
ENSGAGG00000011748	-	93	77.810	ENSODEG00000016260	RAVER1	81	77.681	Octodon_degus
ENSGAGG00000011748	-	96	68.097	ENSONIG00000001559	raver1	86	68.449	Oreochromis_niloticus
ENSGAGG00000011748	-	96	74.151	ENSOCUG00000020918	RAVER1	79	76.232	Oryctolagus_cuniculus
ENSGAGG00000011748	-	99	66.581	ENSORLG00000005458	raver1	91	52.144	Oryzias_latipes
ENSGAGG00000011748	-	99	67.095	ENSORLG00020004392	raver1	80	64.423	Oryzias_latipes_hni
ENSGAGG00000011748	-	99	66.838	ENSORLG00015017222	raver1	91	52.559	Oryzias_latipes_hsok
ENSGAGG00000011748	-	89	83.019	ENSOMEG00000023956	raver1	90	83.019	Oryzias_melastigma
ENSGAGG00000011748	-	96	76.882	ENSOGAG00000011071	RAVER1	94	62.550	Otolemur_garnettii
ENSGAGG00000011748	-	96	73.656	ENSOARG00000015886	RAVER1	78	74.783	Ovis_aries
ENSGAGG00000011748	-	96	76.344	ENSPPAG00000002611	RAVER1	94	63.685	Pan_paniscus
ENSGAGG00000011748	-	96	76.882	ENSPPRG00000009912	RAVER1	82	76.786	Panthera_pardus
ENSGAGG00000011748	-	96	76.344	ENSPTRG00000010466	RAVER1	94	63.685	Pan_troglodytes
ENSGAGG00000011748	-	96	78.144	ENSPANG00000004122	RAVER1	94	63.588	Papio_anubis
ENSGAGG00000011748	-	96	76.344	ENSPEMG00000016411	-	96	62.234	Peromyscus_maniculatus_bairdii
ENSGAGG00000011748	-	96	79.255	ENSPCIG00000018695	-	96	68.421	Phascolarctos_cinereus
ENSGAGG00000011748	-	96	66.759	ENSPFOG00000007016	raver1	78	68.564	Poecilia_formosa
ENSGAGG00000011748	-	99	49.728	ENSPLAG00000020793	raver1	91	50.548	Poecilia_latipinna
ENSGAGG00000011748	-	99	67.010	ENSPMEG00000011220	raver1	80	68.280	Poecilia_mexicana
ENSGAGG00000011748	-	99	50.479	ENSPREG00000006864	raver1	90	50.769	Poecilia_reticulata
ENSGAGG00000011748	-	96	76.344	ENSPPYG00000010514	RAVER1	67	77.681	Pongo_abelii
ENSGAGG00000011748	-	96	76.613	ENSPCOG00000026605	RAVER1	94	62.317	Propithecus_coquereli
ENSGAGG00000011748	-	96	77.568	ENSPVAG00000003689	RAVER1	96	63.172	Pteropus_vampyrus
ENSGAGG00000011748	-	75	91.667	ENSPNYG00000013284	raver1	91	51.046	Pundamilia_nyererei
ENSGAGG00000011748	-	96	61.233	ENSPNAG00000015476	raver1	89	59.956	Pygocentrus_nattereri
ENSGAGG00000011748	-	95	78.090	ENSRNOG00000020710	Raver1	96	62.517	Rattus_norvegicus
ENSGAGG00000011748	-	96	78.144	ENSRBIG00000034702	RAVER1	94	66.022	Rhinopithecus_bieti
ENSGAGG00000011748	-	96	78.144	ENSRROG00000031186	RAVER1	94	66.022	Rhinopithecus_roxellana
ENSGAGG00000011748	-	96	75.806	ENSSBOG00000023423	RAVER1	94	65.556	Saimiri_boliviensis_boliviensis
ENSGAGG00000011748	-	89	79.819	ENSSHAG00000008181	-	81	81.250	Sarcophilus_harrisii
ENSGAGG00000011748	-	96	68.919	ENSSMAG00000004546	raver1	79	68.919	Scophthalmus_maximus
ENSGAGG00000011748	-	99	67.677	ENSSDUG00000021063	raver1	80	70.430	Seriola_dumerili
ENSGAGG00000011748	-	99	67.677	ENSSLDG00000014505	raver1	80	70.430	Seriola_lalandi_dorsalis
ENSGAGG00000011748	-	96	69.086	ENSSPAG00000000688	raver1	80	69.086	Stegastes_partitus
ENSGAGG00000011748	-	96	77.151	ENSSSCG00000013650	-	96	65.193	Sus_scrofa
ENSGAGG00000011748	-	98	65.796	ENSTRUG00000025641	raver1	81	66.756	Takifugu_rubripes
ENSGAGG00000011748	-	96	76.075	ENSTTRG00000009552	RAVER1	96	63.356	Tursiops_truncatus
ENSGAGG00000011748	-	96	77.419	ENSUAMG00000020385	RAVER1	94	63.418	Ursus_americanus
ENSGAGG00000011748	-	96	76.882	ENSVVUG00000028976	RAVER1	94	65.193	Vulpes_vulpes
ENSGAGG00000011748	-	96	59.718	ENSXETG00000011622	raver1	80	74.052	Xenopus_tropicalis
ENSGAGG00000011748	-	99	65.722	ENSXCOG00000016368	raver1	80	66.935	Xiphophorus_couchianus
ENSGAGG00000011748	-	99	65.722	ENSXMAG00000000217	raver1	80	66.935	Xiphophorus_maculatus