EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000011838 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 1378 bases
Position: chrPPEB01001327.1:45694-47071
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000015702	APOBEC_N	PF08210.11	1.1e-61	1	1
ENSGAGP00000015703	APOBEC_N	PF08210.11	4e-11	1	1
ENSGAGP00000015702	APOBEC_C	PF05240.14	4.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000017931	-	603	-	ENSGAGP00000015702	200 (aa)	-	-
ENSGAGT00000017932	-	216	-	ENSGAGP00000015703	71 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000011838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000011838's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000011838	-	83	34.884	ENSGAGG00000010347	APOBEC2	71	36.364
ENSGAGG00000011838	-	64	36.434	ENSGAGG00000004947	-	72	33.333
ENSGAGG00000011838	-	98	100.000	ENSGAGG00000011839	-	99	100.000
ENSGAGG00000011838	-	68	47.436	ENSGAGG00000011837	-	55	46.250
ENSGAGG00000011838	-	70	35.417	ENSGAGG00000021744	-	53	35.417

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000011838	-	98	88.265	ENSG00000111732	AICDA	99	88.265	Homo_sapiens
ENSGAGG00000011838	-	98	57.212	ENSAPOG00000023552	aicda	98	59.474	Acanthochromis_polyacanthus
ENSGAGG00000011838	-	98	90.816	ENSAMEG00000007082	AICDA	99	90.816	Ailuropoda_melanoleuca
ENSGAGG00000011838	-	98	59.898	ENSACIG00000012301	aicda	100	59.898	Amphilophus_citrinellus
ENSGAGG00000011838	-	98	58.673	ENSAOCG00000000482	aicda	98	58.673	Amphiprion_ocellaris
ENSGAGG00000011838	-	98	58.673	ENSAPEG00000009755	aicda	98	58.673	Amphiprion_percula
ENSGAGG00000011838	-	100	60.591	ENSATEG00000022035	aicda	99	60.591	Anabas_testudineus
ENSGAGG00000011838	-	99	91.457	ENSAPLG00000013954	AICDA	99	91.457	Anas_platyrhynchos
ENSGAGG00000011838	-	98	89.796	ENSACAG00000017441	AICDA	98	89.796	Anolis_carolinensis
ENSGAGG00000011838	-	98	89.286	ENSANAG00000022438	AICDA	99	89.286	Aotus_nancymaae
ENSGAGG00000011838	-	98	60.406	ENSACLG00000022679	aicda	100	60.406	Astatotilapia_calliptera
ENSGAGG00000011838	-	83	62.712	ENSAMXG00000037242	aicda	63	58.553	Astyanax_mexicanus
ENSGAGG00000011838	-	98	87.310	ENSBTAG00000018849	AICDA	99	87.310	Bos_taurus
ENSGAGG00000011838	-	98	89.286	ENSCJAG00000018856	AICDA	99	89.286	Callithrix_jacchus
ENSGAGG00000011838	-	98	91.837	ENSCAFG00000013897	AICDA	84	91.837	Canis_familiaris
ENSGAGG00000011838	-	98	91.837	ENSCAFG00020003515	AICDA	96	91.837	Canis_lupus_dingo
ENSGAGG00000011838	-	98	85.787	ENSCHIG00000012409	AICDA	99	85.787	Capra_hircus
ENSGAGG00000011838	-	98	87.245	ENSTSYG00000011304	AICDA	99	87.245	Carlito_syrichta
ENSGAGG00000011838	-	90	88.268	ENSCPOG00000037838	-	93	88.095	Cavia_porcellus
ENSGAGG00000011838	-	97	89.119	ENSCPOG00000030440	-	100	89.119	Cavia_porcellus
ENSGAGG00000011838	-	97	88.601	ENSCPOG00000039255	-	100	88.601	Cavia_porcellus
ENSGAGG00000011838	-	98	70.918	ENSCCAG00000030398	AICDA	99	69.898	Cebus_capucinus
ENSGAGG00000011838	-	98	89.286	ENSCATG00000039986	AICDA	99	89.286	Cercocebus_atys
ENSGAGG00000011838	-	98	89.286	ENSCSAG00000009663	AICDA	100	89.286	Chlorocebus_sabaeus
ENSGAGG00000011838	-	98	67.513	ENSCHOG00000010248	AICDA	99	67.513	Choloepus_hoffmanni
ENSGAGG00000011838	-	100	99.000	ENSCPBG00000014337	AICDA	100	99.000	Chrysemys_picta_bellii
ENSGAGG00000011838	-	98	89.286	ENSCANG00000035131	AICDA	99	89.286	Colobus_angolensis_palliatus
ENSGAGG00000011838	-	98	89.286	ENSCGRG00001009654	Aicda	99	89.286	Cricetulus_griseus_chok1gshd
ENSGAGG00000011838	-	98	89.286	ENSCGRG00000013829	Aicda	99	89.286	Cricetulus_griseus_crigri
ENSGAGG00000011838	-	98	55.769	ENSCSEG00000018589	aicda	97	55.769	Cynoglossus_semilaevis
ENSGAGG00000011838	-	97	59.487	ENSCVAG00000001218	aicda	97	59.487	Cyprinodon_variegatus
ENSGAGG00000011838	-	98	62.439	ENSDARG00000015734	aicda	97	62.439	Danio_rerio
ENSGAGG00000011838	-	90	88.268	ENSETEG00000014702	AICDA	93	88.690	Echinops_telfairi
ENSGAGG00000011838	-	98	90.816	ENSEASG00005015947	AICDA	99	90.816	Equus_asinus_asinus
ENSGAGG00000011838	-	98	91.327	ENSECAG00000018578	AICDA	99	91.327	Equus_caballus
ENSGAGG00000011838	-	90	88.268	ENSEEUG00000013899	AICDA	93	88.095	Erinaceus_europaeus
ENSGAGG00000011838	-	98	58.654	ENSELUG00000016293	aicda	97	56.250	Esox_lucius
ENSGAGG00000011838	-	98	90.816	ENSFCAG00000006052	AICDA	84	90.816	Felis_catus
ENSGAGG00000011838	-	98	84.184	ENSFALG00000007261	AICDA	100	84.184	Ficedula_albicollis
ENSGAGG00000011838	-	90	81.006	ENSFDAG00000011141	AICDA	92	80.357	Fukomys_damarensis
ENSGAGG00000011838	-	97	57.282	ENSFHEG00000015733	aicda	99	57.282	Fundulus_heteroclitus
ENSGAGG00000011838	-	98	57.692	ENSGMOG00000004114	aicda	97	57.692	Gadus_morhua
ENSGAGG00000011838	-	98	91.837	ENSGALG00000014280	AICDA	99	91.837	Gallus_gallus
ENSGAGG00000011838	-	98	54.589	ENSGAFG00000013758	aicda	95	54.589	Gambusia_affinis
ENSGAGG00000011838	-	98	56.731	ENSGACG00000010521	aicda	97	56.731	Gasterosteus_aculeatus
ENSGAGG00000011838	-	98	88.265	ENSGGOG00000003338	AICDA	98	88.265	Gorilla_gorilla
ENSGAGG00000011838	-	98	60.406	ENSHBUG00000014333	aicda	100	60.406	Haplochromis_burtoni
ENSGAGG00000011838	-	99	89.899	ENSHGLG00000001443	AICDA	98	90.306	Heterocephalus_glaber_female
ENSGAGG00000011838	-	98	90.816	ENSHGLG00100001381	AICDA	99	90.816	Heterocephalus_glaber_male
ENSGAGG00000011838	-	95	57.812	ENSHCOG00000018886	aicda	96	58.115	Hippocampus_comes
ENSGAGG00000011838	-	98	56.522	ENSIPUG00000007380	aicda	98	53.140	Ictalurus_punctatus
ENSGAGG00000011838	-	98	88.776	ENSSTOG00000010972	AICDA	99	88.776	Ictidomys_tridecemlineatus
ENSGAGG00000011838	-	90	91.061	ENSJJAG00000000908	Aicda	93	91.071	Jaculus_jaculus
ENSGAGG00000011838	-	98	60.914	ENSKMAG00000006359	aicda	99	60.914	Kryptolebias_marmoratus
ENSGAGG00000011838	-	98	54.854	ENSLBEG00000015351	aicda	98	55.610	Labrus_bergylta
ENSGAGG00000011838	-	82	68.966	ENSLACG00000009320	aicda	93	73.188	Latimeria_chalumnae
ENSGAGG00000011838	-	63	66.667	ENSLOCG00000008158	aicda	98	66.667	Lepisosteus_oculatus
ENSGAGG00000011838	-	98	86.667	ENSLAFG00000000721	AICDA	100	86.667	Loxodonta_africana
ENSGAGG00000011838	-	98	89.286	ENSMFAG00000037834	AICDA	99	89.286	Macaca_fascicularis
ENSGAGG00000011838	-	98	89.286	ENSMMUG00000019134	AICDA	99	89.286	Macaca_mulatta
ENSGAGG00000011838	-	98	89.286	ENSMNEG00000043421	AICDA	99	89.286	Macaca_nemestrina
ENSGAGG00000011838	-	98	89.286	ENSMLEG00000040938	AICDA	99	89.286	Mandrillus_leucophaeus
ENSGAGG00000011838	-	74	90.476	ENSMLEG00000039759	-	99	82.249	Mandrillus_leucophaeus
ENSGAGG00000011838	-	98	58.173	ENSMAMG00000020032	aicda	97	58.173	Mastacembelus_armatus
ENSGAGG00000011838	-	98	60.406	ENSMZEG00005016678	aicda	100	60.406	Maylandia_zebra
ENSGAGG00000011838	-	98	91.837	ENSMGAG00000013942	AICDA	100	91.837	Meleagris_gallopavo
ENSGAGG00000011838	-	98	89.286	ENSMAUG00000012229	Aicda	99	89.286	Mesocricetus_auratus
ENSGAGG00000011838	-	98	88.325	ENSMICG00000011695	AICDA	99	88.325	Microcebus_murinus
ENSGAGG00000011838	-	98	88.776	ENSMOCG00000022460	Aicda	99	88.776	Microtus_ochrogaster
ENSGAGG00000011838	-	98	57.212	ENSMMOG00000016707	aicda	97	57.212	Mola_mola
ENSGAGG00000011838	-	97	88.083	ENSMODG00000018002	AICDA	100	88.083	Monodelphis_domestica
ENSGAGG00000011838	-	98	57.212	ENSMALG00000010442	aicda	97	57.212	Monopterus_albus
ENSGAGG00000011838	-	82	82.759	MGP_CAROLIEiJ_G0028824	-	99	90.000	Mus_caroli
ENSGAGG00000011838	-	98	89.286	ENSMUSG00000040627	Aicda	99	89.286	Mus_musculus
ENSGAGG00000011838	-	98	89.286	MGP_PahariEiJ_G0022579	Aicda	100	88.333	Mus_pahari
ENSGAGG00000011838	-	98	89.286	MGP_SPRETEiJ_G0029856	Aicda	99	89.286	Mus_spretus
ENSGAGG00000011838	-	98	91.327	ENSMPUG00000017533	AICDA	93	91.327	Mustela_putorius_furo
ENSGAGG00000011838	-	98	89.286	ENSMLUG00000007881	AICDA	99	89.286	Myotis_lucifugus
ENSGAGG00000011838	-	98	90.816	ENSNGAG00000023430	Aicda	99	90.816	Nannospalax_galili
ENSGAGG00000011838	-	98	57.212	ENSNBRG00000000070	aicda	96	60.526	Neolamprologus_brichardi
ENSGAGG00000011838	-	98	87.245	ENSNLEG00000001917	AICDA	99	87.245	Nomascus_leucogenys
ENSGAGG00000011838	-	98	87.245	ENSMEUG00000006570	AICDA	98	87.245	Notamacropus_eugenii
ENSGAGG00000011838	-	98	87.179	ENSOPRG00000013486	AICDA	100	87.179	Ochotona_princeps
ENSGAGG00000011838	-	98	90.769	ENSODEG00000001235	AICDA	98	90.769	Octodon_degus
ENSGAGG00000011838	-	98	56.250	ENSONIG00000012823	aicda	97	56.250	Oreochromis_niloticus
ENSGAGG00000011838	-	99	90.863	ENSOANG00000007150	AICDA	99	90.863	Ornithorhynchus_anatinus
ENSGAGG00000011838	-	97	89.119	ENSOCUG00000023739	AICDA	100	89.119	Oryctolagus_cuniculus
ENSGAGG00000011838	-	98	59.091	ENSORLG00000011705	aicda	99	59.091	Oryzias_latipes
ENSGAGG00000011838	-	98	59.091	ENSORLG00020006547	aicda	99	59.091	Oryzias_latipes_hni
ENSGAGG00000011838	-	98	58.883	ENSORLG00015012504	aicda	98	58.883	Oryzias_latipes_hsok
ENSGAGG00000011838	-	99	58.706	ENSOMEG00000011880	aicda	98	58.706	Oryzias_melastigma
ENSGAGG00000011838	-	98	89.286	ENSOGAG00000026770	AICDA	99	89.286	Otolemur_garnettii
ENSGAGG00000011838	-	98	84.925	ENSOARG00000001982	AICDA	99	84.925	Ovis_aries
ENSGAGG00000011838	-	98	88.265	ENSPPAG00000038169	AICDA	99	88.265	Pan_paniscus
ENSGAGG00000011838	-	98	90.816	ENSPPRG00000012985	AICDA	99	90.816	Panthera_pardus
ENSGAGG00000011838	-	98	90.816	ENSPTIG00000020074	AICDA	99	90.816	Panthera_tigris_altaica
ENSGAGG00000011838	-	98	88.776	ENSPTRG00000004640	AICDA	99	88.776	Pan_troglodytes
ENSGAGG00000011838	-	98	89.286	ENSPANG00000017883	AICDA	99	89.286	Papio_anubis
ENSGAGG00000011838	-	91	62.105	ENSPKIG00000001499	aicda	100	62.105	Paramormyrops_kingsleyae
ENSGAGG00000011838	-	98	98.469	ENSPSIG00000013283	AICDA	100	98.469	Pelodiscus_sinensis
ENSGAGG00000011838	-	94	57.576	ENSPMGG00000014598	aicda	93	57.789	Periophthalmus_magnuspinnatus
ENSGAGG00000011838	-	98	88.265	ENSPEMG00000008352	Aicda	99	88.265	Peromyscus_maniculatus_bairdii
ENSGAGG00000011838	-	98	88.776	ENSPCIG00000023974	AICDA	99	88.776	Phascolarctos_cinereus
ENSGAGG00000011838	-	94	52.459	ENSPFOG00000011197	aicda	89	55.208	Poecilia_formosa
ENSGAGG00000011838	-	97	55.825	ENSPLAG00000014098	aicda	98	55.825	Poecilia_latipinna
ENSGAGG00000011838	-	97	55.825	ENSPMEG00000024203	aicda	96	55.825	Poecilia_mexicana
ENSGAGG00000011838	-	97	55.340	ENSPREG00000009041	aicda	96	55.340	Poecilia_reticulata
ENSGAGG00000011838	-	98	88.776	ENSPPYG00000004242	AICDA	100	88.776	Pongo_abelii
ENSGAGG00000011838	-	70	82.000	ENSPCAG00000009544	-	53	87.273	Procavia_capensis
ENSGAGG00000011838	-	67	87.313	ENSPCOG00000003380	-	74	86.992	Propithecus_coquereli
ENSGAGG00000011838	-	86	85.246	ENSPCOG00000019228	-	91	85.246	Propithecus_coquereli
ENSGAGG00000011838	-	98	87.755	ENSPVAG00000012185	AICDA	99	87.755	Pteropus_vampyrus
ENSGAGG00000011838	-	98	60.406	ENSPNYG00000000988	aicda	100	60.406	Pundamilia_nyererei
ENSGAGG00000011838	-	98	60.194	ENSPNAG00000019237	aicda	99	60.194	Pygocentrus_nattereri
ENSGAGG00000011838	-	98	89.286	ENSRNOG00000015478	Aicda	99	89.286	Rattus_norvegicus
ENSGAGG00000011838	-	98	89.286	ENSRBIG00000026659	AICDA	99	89.286	Rhinopithecus_bieti
ENSGAGG00000011838	-	98	89.286	ENSRROG00000032866	AICDA	99	89.286	Rhinopithecus_roxellana
ENSGAGG00000011838	-	98	69.898	ENSSBOG00000035758	AICDA	99	68.878	Saimiri_boliviensis_boliviensis
ENSGAGG00000011838	-	98	86.735	ENSSHAG00000008694	AICDA	99	86.735	Sarcophilus_harrisii
ENSGAGG00000011838	-	98	60.976	ENSSFOG00015001695	aicda	97	60.976	Scleropages_formosus
ENSGAGG00000011838	-	98	57.692	ENSSMAG00000012339	aicda	89	57.692	Scophthalmus_maximus
ENSGAGG00000011838	-	100	59.204	ENSSDUG00000009894	aicda	99	59.204	Seriola_dumerili
ENSGAGG00000011838	-	98	60.204	ENSSLDG00000023022	aicda	95	60.204	Seriola_lalandi_dorsalis
ENSGAGG00000011838	-	97	88.083	ENSSPUG00000009022	AICDA	97	88.542	Sphenodon_punctatus
ENSGAGG00000011838	-	98	56.731	ENSSPAG00000021499	aicda	65	56.731	Stegastes_partitus
ENSGAGG00000011838	-	98	86.735	ENSSSCG00000000667	AICDA	99	86.735	Sus_scrofa
ENSGAGG00000011838	-	98	83.673	ENSTGUG00000013115	AICDA	100	83.673	Taeniopygia_guttata
ENSGAGG00000011838	-	98	56.039	ENSTRUG00000007079	aicda	97	56.039	Takifugu_rubripes
ENSGAGG00000011838	-	99	55.450	ENSTNIG00000008118	aicda	99	55.450	Tetraodon_nigroviridis
ENSGAGG00000011838	-	98	59.694	ENSTBEG00000002559	AICDA	62	85.124	Tupaia_belangeri
ENSGAGG00000011838	-	90	88.333	ENSTTRG00000000703	AICDA	93	88.166	Tursiops_truncatus
ENSGAGG00000011838	-	96	90.576	ENSUAMG00000011642	AICDA	97	90.576	Ursus_americanus
ENSGAGG00000011838	-	96	90.576	ENSUMAG00000016540	AICDA	97	90.576	Ursus_maritimus
ENSGAGG00000011838	-	73	89.796	ENSVPAG00000003950	AICDA	100	89.796	Vicugna_pacos
ENSGAGG00000011838	-	99	70.854	ENSXETG00000023905	aicda	99	70.854	Xenopus_tropicalis
ENSGAGG00000011838	-	98	55.102	ENSXCOG00000019386	aicda	90	55.102	Xiphophorus_couchianus
ENSGAGG00000011838	-	100	56.219	ENSXMAG00000011889	aicda	92	56.219	Xiphophorus_maculatus