EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGAGG00000011960 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Gopherus_agassizii
Status
putative
Strand
Plus strand
Length
41975 bases
Position
chrPPEB01000912.1:26589-68563
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAGP00000019557tRNA_anti-codonPF01336.251.7e-1311
ENSGAGP00000019650tRNA_anti-codonPF01336.251.9e-1311
ENSGAGP00000019653tRNA_anti-codonPF01336.251.9e-1311
ENSGAGP00000019648tRNA_anti-codonPF01336.251.9e-1311
ENSGAGP00000019658tRNA_anti-codonPF01336.252e-1311
ENSGAGP00000019649tRNA_anti-codonPF01336.252e-1311
ENSGAGP00000019555tRNA_anti-codonPF01336.252e-1311
ENSGAGP00000019651tRNA_anti-codonPF01336.252e-1311
ENSGAGP00000019656tRNA_anti-codonPF01336.252.2e-1311
ENSGAGP00000019570tRNA_anti-codonPF01336.252.4e-1311
ENSGAGP00000019650tRNA-synt_2PF00152.209.7e-8111
ENSGAGP00000019653tRNA-synt_2PF00152.201e-8011
ENSGAGP00000019648tRNA-synt_2PF00152.201e-8011
ENSGAGP00000019649tRNA-synt_2PF00152.201.1e-8011
ENSGAGP00000019651tRNA-synt_2PF00152.201.1e-8011
ENSGAGP00000019658tRNA-synt_2PF00152.201.1e-8011
ENSGAGP00000019555tRNA-synt_2PF00152.201.1e-8011
ENSGAGP00000019656tRNA-synt_2PF00152.201.2e-8011
ENSGAGP00000019570tRNA-synt_2PF00152.201.3e-8011
ENSGAGP00000019557tRNA-synt_2PF00152.201.4e-6212
ENSGAGP00000019557tRNA-synt_2PF00152.201.4e-6222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAGT00000022386-1608-ENSGAGP00000019653535 (aa)--
ENSGAGT00000022379-1632-ENSGAGP00000019648543 (aa)--
ENSGAGT00000022382-1596-ENSGAGP00000019650531 (aa)--
ENSGAGT00000022390-1752-ENSGAGP00000019656583 (aa)--
ENSGAGT00000022380-1650-ENSGAGP00000019649549 (aa)--
ENSGAGT00000022268-2248-ENSGAGP00000019557511 (aa)--
ENSGAGT00000022283-1788-ENSGAGP00000019570595 (aa)--
ENSGAGT00000022384-1668-ENSGAGP00000019651555 (aa)--
ENSGAGT00000022264-2368-ENSGAGP00000019555551 (aa)--
ENSGAGT00000022393-1656-ENSGAGP00000019658551 (aa)--
Gene Model
Click here to download ENSGAGG00000011960's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000011960's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGAGG00000011960-9672.888ENSGAGG00000023836KARS8772.481
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAGG00000011960-9574.257ENSG00000065427KARS10073.529Homo_sapiens
ENSGAGG00000011960-9773.938ENSAPOG00000010997kars9273.473Acanthochromis_polyacanthus
ENSGAGG00000011960-9673.425ENSAMEG00000005347KARS8670.896Ailuropoda_melanoleuca
ENSGAGG00000011960-9768.533ENSACIG00000000304kars8968.945Amphilophus_citrinellus
ENSGAGG00000011960-9773.166ENSAOCG00000012971kars8972.745Amphiprion_ocellaris
ENSGAGG00000011960-9773.359ENSAPEG00000011144kars9172.901Amphiprion_percula
ENSGAGG00000011960-9575.494ENSATEG00000004954kars9471.507Anabas_testudineus
ENSGAGG00000011960-9470.530ENSAPLG00000012705KARS9270.727Anas_platyrhynchos
ENSGAGG00000011960-9572.530ENSACAG00000007577KARS8370.667Anolis_carolinensis
ENSGAGG00000011960-9561.569ENSANAG00000031739-9058.942Aotus_nancymaae
ENSGAGG00000011960-9574.455ENSANAG00000030403-8773.410Aotus_nancymaae
ENSGAGG00000011960-9773.166ENSACLG00000001613kars9072.453Astatotilapia_calliptera
ENSGAGG00000011960-9573.715ENSAMXG00000030719kars9271.107Astyanax_mexicanus
ENSGAGG00000011960-9970.841ENSBTAG00000015677KARS6871.212Bos_taurus
ENSGAGG00000011960-9561.660WBGene00002238kars-19762.048Caenorhabditis_elegans
ENSGAGG00000011960-9574.653ENSCJAG00000014213KARS9072.045Callithrix_jacchus
ENSGAGG00000011960-9573.069ENSCAFG00000020069KARS8669.797Canis_familiaris
ENSGAGG00000011960-9573.069ENSCAFG00020001721KARS9069.797Canis_lupus_dingo
ENSGAGG00000011960-9573.465ENSCHIG00000014108-9070.599Capra_hircus
ENSGAGG00000011960-9572.277ENSCHIG00000016073-8771.154Capra_hircus
ENSGAGG00000011960-9971.402ENSTSYG00000001643KARS9072.745Carlito_syrichta
ENSGAGG00000011960-9866.105ENSCAPG00000016234KARS8769.231Cavia_aperea
ENSGAGG00000011960-9871.348ENSCPOG00000012036KARS9071.028Cavia_porcellus
ENSGAGG00000011960-9058.996ENSCCAG00000030337-9257.115Cebus_capucinus
ENSGAGG00000011960-9574.455ENSCCAG00000034307-8972.045Cebus_capucinus
ENSGAGG00000011960-9870.732ENSCATG00000038129KARS9070.732Cercocebus_atys
ENSGAGG00000011960-9772.814ENSCLAG00000007905KARS8972.420Chinchilla_lanigera
ENSGAGG00000011960-9870.169ENSCSAG00000003664KARS8570.169Chlorocebus_sabaeus
ENSGAGG00000011960-8577.728ENSCHOG00000013447KARS7277.728Choloepus_hoffmanni
ENSGAGG00000011960-9673.281ENSCPBG00000026969KARS8972.137Chrysemys_picta_bellii
ENSGAGG00000011960-9996.182ENSCPBG00000002553-9996.182Chrysemys_picta_bellii
ENSGAGG00000011960-9567.456ENSCING00000009513-9464.825Ciona_intestinalis
ENSGAGG00000011960-5969.524ENSCSAVG00000001136-9769.524Ciona_savignyi
ENSGAGG00000011960-9468.463ENSCSAVG00000007684-9862.970Ciona_savignyi
ENSGAGG00000011960-9866.979ENSCANG00000032813KARS8966.792Colobus_angolensis_palliatus
ENSGAGG00000011960-9773.294ENSCGRG00001004055KARS8972.023Cricetulus_griseus_chok1gshd
ENSGAGG00000011960-9773.294ENSCGRG00000014242KARS8972.023Cricetulus_griseus_crigri
ENSGAGG00000011960-9573.069ENSCSEG00000008324kars8872.978Cynoglossus_semilaevis
ENSGAGG00000011960-9574.059ENSCVAG00000019686kars9072.973Cyprinodon_variegatus
ENSGAGG00000011960-9674.016ENSDARG00000103799kars9874.016Danio_rerio
ENSGAGG00000011960-9573.663ENSDNOG00000002241KARS8571.482Dasypus_novemcinctus
ENSGAGG00000011960-9871.482ENSDORG00000004780-9071.295Dipodomys_ordii
ENSGAGG00000011960-9358.740ENSDORG00000024214-8857.752Dipodomys_ordii
ENSGAGG00000011960-9569.368FBgn0027084LysRS9366.605Drosophila_melanogaster
ENSGAGG00000011960-9970.902ENSETEG00000008353KARS8770.534Echinops_telfairi
ENSGAGG00000011960-9671.961ENSEBUG00000001284-8871.875Eptatretus_burgeri
ENSGAGG00000011960-9674.656ENSEASG00005013497KARS9071.933Equus_asinus_asinus
ENSGAGG00000011960-9674.656ENSECAG00000013424KARS9071.933Equus_caballus
ENSGAGG00000011960-9963.904ENSEEUG00000007042KARS8664.060Erinaceus_europaeus
ENSGAGG00000011960-9566.733ENSELUG00000014575kars9164.662Esox_lucius
ENSGAGG00000011960-9673.819ENSFCAG00000008573KARS9071.269Felis_catus
ENSGAGG00000011960-9970.818ENSFALG00000002543KARS9171.161Ficedula_albicollis
ENSGAGG00000011960-9474.451ENSFDAG00000007155KARS8971.834Fukomys_damarensis
ENSGAGG00000011960-9871.483ENSFHEG00000006172kars9568.909Fundulus_heteroclitus
ENSGAGG00000011960-9572.745ENSGMOG00000002633kars8472.427Gadus_morhua
ENSGAGG00000011960-9870.732ENSGALG00000000907KARS9370.732Gallus_gallus
ENSGAGG00000011960-9771.930ENSGAFG00000017252kars9468.991Gambusia_affinis
ENSGAGG00000011960-9771.374ENSGACG00000015749kars9070.467Gasterosteus_aculeatus
ENSGAGG00000011960-9574.257ENSGGOG00000005515KARS9070.718Gorilla_gorilla
ENSGAGG00000011960-9773.166ENSHBUG00000013619kars9072.453Haplochromis_burtoni
ENSGAGG00000011960-9959.594ENSHGLG00000001298-8959.594Heterocephalus_glaber_female
ENSGAGG00000011960-9567.327ENSHGLG00000015235-9064.273Heterocephalus_glaber_female
ENSGAGG00000011960-9574.257ENSHGLG00000011898KARS9073.077Heterocephalus_glaber_female
ENSGAGG00000011960-9574.257ENSHGLG00100012264KARS8773.077Heterocephalus_glaber_male
ENSGAGG00000011960-9959.410ENSHGLG00100006466-8959.410Heterocephalus_glaber_male
ENSGAGG00000011960-9567.327ENSHGLG00100012523-8870.127Heterocephalus_glaber_male
ENSGAGG00000011960-9574.162ENSHCOG00000002900kars8673.828Hippocampus_comes
ENSGAGG00000011960-9674.213ENSIPUG00000009862kars9370.874Ictalurus_punctatus
ENSGAGG00000011960-9574.257ENSSTOG00000004205KARS9071.269Ictidomys_tridecemlineatus
ENSGAGG00000011960-9673.674ENSJJAG00000020406Kars9170.950Jaculus_jaculus
ENSGAGG00000011960-9673.152ENSKMAG00000006434kars8973.152Kryptolebias_marmoratus
ENSGAGG00000011960-9772.447ENSLBEG00000026537kars8871.241Labrus_bergylta
ENSGAGG00000011960-9774.269ENSLACG00000006667KARS8771.667Latimeria_chalumnae
ENSGAGG00000011960-9675.930ENSLACG00000016399-9975.930Latimeria_chalumnae
ENSGAGG00000011960-9574.704ENSLOCG00000004002kars8874.269Lepisosteus_oculatus
ENSGAGG00000011960-9969.429ENSLOCG00000013608-9769.429Lepisosteus_oculatus
ENSGAGG00000011960-9773.684ENSLAFG00000015340KARS8870.599Loxodonta_africana
ENSGAGG00000011960-9573.069ENSMFAG00000040024KARS8771.923Macaca_fascicularis
ENSGAGG00000011960-8370.068ENSMNEG00000035832-8868.860Macaca_nemestrina
ENSGAGG00000011960-9573.069ENSMNEG00000042879-8771.923Macaca_nemestrina
ENSGAGG00000011960-9870.919ENSMLEG00000034947KARS8970.919Mandrillus_leucophaeus
ENSGAGG00000011960-9772.553ENSMAMG00000021559kars8871.215Mastacembelus_armatus
ENSGAGG00000011960-9773.166ENSMZEG00005014382kars9072.453Maylandia_zebra
ENSGAGG00000011960-9472.222ENSMGAG00000009000KARS8972.691Meleagris_gallopavo
ENSGAGG00000011960-9872.233ENSMICG00000011997KARS9071.963Microcebus_murinus
ENSGAGG00000011960-9871.723ENSMOCG00000011829Kars9071.215Microtus_ochrogaster
ENSGAGG00000011960-9868.727ENSMOCG00000019029-9068.224Microtus_ochrogaster
ENSGAGG00000011960-9772.973ENSMMOG00000016934kars9472.433Mola_mola
ENSGAGG00000011960-9771.593ENSMODG00000002215-9569.035Monodelphis_domestica
ENSGAGG00000011960-9572.781ENSMODG00000002238-8472.461Monodelphis_domestica
ENSGAGG00000011960-9871.648ENSMALG00000020858kars9370.467Monopterus_albus
ENSGAGG00000011960-7677.457MGP_CAROLIEiJ_G0031588Kars8777.457Mus_caroli
ENSGAGG00000011960-9773.489ENSMUSG00000031948Kars9071.589Mus_musculus
ENSGAGG00000011960-9773.489MGP_PahariEiJ_G0023186Kars8972.212Mus_pahari
ENSGAGG00000011960-9773.489MGP_SPRETEiJ_G0032706Kars9071.589Mus_spretus
ENSGAGG00000011960-9673.819ENSMPUG00000009871KARS8671.322Mustela_putorius_furo
ENSGAGG00000011960-6948.649ENSMLUG00000026871-7448.649Myotis_lucifugus
ENSGAGG00000011960-9871.857ENSMLUG00000015119-8972.045Myotis_lucifugus
ENSGAGG00000011960-9570.270ENSNGAG00000022944-8969.674Nannospalax_galili
ENSGAGG00000011960-9871.617ENSNGAG00000018820-9071.028Nannospalax_galili
ENSGAGG00000011960-9773.166ENSNBRG00000011098kars9072.264Neolamprologus_brichardi
ENSGAGG00000011960-9574.257ENSNLEG00000013072KARS9269.287Nomascus_leucogenys
ENSGAGG00000011960-9671.120ENSMEUG00000008684KARS8868.401Notamacropus_eugenii
ENSGAGG00000011960-9970.902ENSOPRG00000012544KARS8870.902Ochotona_princeps
ENSGAGG00000011960-9574.455ENSODEG00000013099-9172.624Octodon_degus
ENSGAGG00000011960-9852.662ENSODEG00000009464-9152.662Octodon_degus
ENSGAGG00000011960-9773.552ENSONIG00000005937kars9272.642Oreochromis_niloticus
ENSGAGG00000011960-9575.050ENSOANG00000008179KARS9071.087Ornithorhynchus_anatinus
ENSGAGG00000011960-9964.925ENSOCUG00000015553KARS8966.045Oryctolagus_cuniculus
ENSGAGG00000011960-9773.129ENSORLG00000007627kars8772.264Oryzias_latipes
ENSGAGG00000011960-9674.016ENSORLG00020010056kars8772.264Oryzias_latipes_hni
ENSGAGG00000011960-9674.016ENSORLG00015008179kars8772.264Oryzias_latipes_hsok
ENSGAGG00000011960-9972.212ENSOMEG00000001710kars9271.776Oryzias_melastigma
ENSGAGG00000011960-9970.149ENSOGAG00000005903KARS8670.149Otolemur_garnettii
ENSGAGG00000011960-9269.643ENSOARG00000006928KARS8869.643Ovis_aries
ENSGAGG00000011960-9573.861ENSPPAG00000036192KARS9070.350Pan_paniscus
ENSGAGG00000011960-9674.213ENSPPRG00000003027KARS9071.642Panthera_pardus
ENSGAGG00000011960-9674.016ENSPTIG00000008011KARS9071.455Panthera_tigris_altaica
ENSGAGG00000011960-9574.059ENSPTRG00000008364KARS9070.534Pan_troglodytes
ENSGAGG00000011960-9870.732ENSPANG00000024106KARS8570.732Papio_anubis
ENSGAGG00000011960-9574.653ENSPKIG00000009896kars9272.368Paramormyrops_kingsleyae
ENSGAGG00000011960-9573.465ENSPSIG00000009294KARS8873.047Pelodiscus_sinensis
ENSGAGG00000011960-9988.624ENSPSIG00000003041-10088.624Pelodiscus_sinensis
ENSGAGG00000011960-9971.591ENSPMGG00000006117kars9471.780Periophthalmus_magnuspinnatus
ENSGAGG00000011960-9773.294ENSPEMG00000012277Kars9171.033Peromyscus_maniculatus_bairdii
ENSGAGG00000011960-9870.229ENSPMAG00000008360-8470.229Petromyzon_marinus
ENSGAGG00000011960-9573.663ENSPCIG00000010761-8971.591Phascolarctos_cinereus
ENSGAGG00000011960-9573.373ENSPCIG00000025469-9267.358Phascolarctos_cinereus
ENSGAGG00000011960-9871.238ENSPFOG00000013253kars8671.238Poecilia_formosa
ENSGAGG00000011960-9970.677ENSPLAG00000004189kars9171.429Poecilia_latipinna
ENSGAGG00000011960-9970.489ENSPMEG00000015698kars9270.621Poecilia_mexicana
ENSGAGG00000011960-9772.515ENSPREG00000023179kars9072.062Poecilia_reticulata
ENSGAGG00000011960-9574.455ENSPPYG00000007567KARS8572.045Pongo_abelii
ENSGAGG00000011960-9568.119ENSPCAG00000010790KARS9768.119Procavia_capensis
ENSGAGG00000011960-8578.396ENSPCOG00000003166KARS8477.876Propithecus_coquereli
ENSGAGG00000011960-9871.670ENSPVAG00000006746KARS8671.269Pteropus_vampyrus
ENSGAGG00000011960-9773.166ENSPNYG00000013095kars9072.453Pundamilia_nyererei
ENSGAGG00000011960-9573.913ENSPNAG00000013828kars8973.489Pygocentrus_nattereri
ENSGAGG00000011960-9772.710ENSRNOG00000019456Kars8571.456Rattus_norvegicus
ENSGAGG00000011960-9871.107ENSRBIG00000030118KARS9071.107Rhinopithecus_bieti
ENSGAGG00000011960-9871.107ENSRROG00000041418KARS9071.107Rhinopithecus_roxellana
ENSGAGG00000011960-9659.923YDR037WKRS18859.923Saccharomyces_cerevisiae
ENSGAGG00000011960-8734.898YNL073W-8534.073Saccharomyces_cerevisiae
ENSGAGG00000011960-9574.455ENSSBOG00000019255KARS9371.857Saimiri_boliviensis_boliviensis
ENSGAGG00000011960-9664.047ENSSHAG00000009005-9661.825Sarcophilus_harrisii
ENSGAGG00000011960-9570.020ENSSHAG00000001359-9565.934Sarcophilus_harrisii
ENSGAGG00000011960-9663.405ENSSHAG00000002050-8562.786Sarcophilus_harrisii
ENSGAGG00000011960-9674.409ENSSFOG00015014837kars9771.033Scleropages_formosus
ENSGAGG00000011960-9573.663ENSSMAG00000021441kars8973.242Scophthalmus_maximus
ENSGAGG00000011960-9673.031ENSSDUG00000001202kars9370.841Seriola_dumerili
ENSGAGG00000011960-9673.031ENSSLDG00000021220kars9370.841Seriola_lalandi_dorsalis
ENSGAGG00000011960-7283.654ENSSARG00000011493KARS7283.654Sorex_araneus
ENSGAGG00000011960-9574.455ENSSPUG00000004974KARS8674.023Sphenodon_punctatus
ENSGAGG00000011960-6583.430ENSSPUG00000000449-8977.953Sphenodon_punctatus
ENSGAGG00000011960-9773.166ENSSPAG00000020365kars9271.992Stegastes_partitus
ENSGAGG00000011960-9573.861ENSSSCG00000002704KARS9070.896Sus_scrofa
ENSGAGG00000011960-9970.841ENSTGUG00000008400KARS9671.028Taeniopygia_guttata
ENSGAGG00000011960-9672.638ENSTRUG00000017551kars8871.293Takifugu_rubripes
ENSGAGG00000011960-9772.008ENSTNIG00000009351kars9270.968Tetraodon_nigroviridis
ENSGAGG00000011960-8564.365ENSTBEG00000004610KARS7864.365Tupaia_belangeri
ENSGAGG00000011960-9573.465ENSTTRG00000001221KARS8571.107Tursiops_truncatus
ENSGAGG00000011960-9673.622ENSUAMG00000017557KARS9071.082Ursus_americanus
ENSGAGG00000011960-9673.622ENSUMAG00000014559KARS8671.082Ursus_maritimus
ENSGAGG00000011960-9572.673ENSVPAG00000003716KARS8371.401Vicugna_pacos
ENSGAGG00000011960-9871.183ENSVVUG00000024338KARS9471.183Vulpes_vulpes
ENSGAGG00000011960-9572.134ENSXETG00000003569kars8871.598Xenopus_tropicalis
ENSGAGG00000011960-9771.930ENSXCOG00000011313kars9471.238Xiphophorus_couchianus
ENSGAGG00000011960-9771.735ENSXMAG00000003191kars9171.048Xiphophorus_maculatus

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