EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000012039 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 3041 bases
Position: chrPPEB01012860.1:8714-11754
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000016008	RVT_1	PF00078.27	2.5e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000018288	-	3041	-	ENSGAGP00000016008	822 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000012039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000012039's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000012039	-	51	35.681	ENSGAGG00000007173	-	66	35.681
ENSGAGG00000012039	-	86	53.221	ENSGAGG00000002613	-	97	53.221
ENSGAGG00000012039	-	100	100.000	ENSGAGG00000020521	-	100	100.000
ENSGAGG00000012039	-	78	96.719	ENSGAGG00000007552	-	100	96.719
ENSGAGG00000012039	-	51	35.681	ENSGAGG00000022002	-	50	35.681
ENSGAGG00000012039	-	68	99.462	ENSGAGG00000013650	-	100	99.462
ENSGAGG00000012039	-	82	99.555	ENSGAGG00000025282	-	58	99.555
ENSGAGG00000012039	-	65	98.874	ENSGAGG00000014538	-	100	98.874
ENSGAGG00000012039	-	100	100.000	ENSGAGG00000022240	-	52	100.000
ENSGAGG00000012039	-	99	54.090	ENSGAGG00000014450	-	73	54.090

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000012039	-	99	48.058	ENSAPOG00000012135	-	71	48.058	Acanthochromis_polyacanthus
ENSGAGG00000012039	-	99	44.634	ENSAPOG00000008045	-	85	44.634	Acanthochromis_polyacanthus
ENSGAGG00000012039	-	90	43.966	ENSACLG00000018060	-	50	43.966	Astatotilapia_calliptera
ENSGAGG00000012039	-	99	40.502	ENSACLG00000014870	-	52	40.502	Astatotilapia_calliptera
ENSGAGG00000012039	-	99	40.974	ENSACLG00000027291	-	53	41.120	Astatotilapia_calliptera
ENSGAGG00000012039	-	99	47.666	ENSACLG00000019876	-	55	47.666	Astatotilapia_calliptera
ENSGAGG00000012039	-	90	47.368	ENSACLG00000008862	-	99	47.574	Astatotilapia_calliptera
ENSGAGG00000012039	-	77	46.948	ENSACLG00000004062	-	86	47.188	Astatotilapia_calliptera
ENSGAGG00000012039	-	99	46.069	ENSACLG00000027730	-	71	46.069	Astatotilapia_calliptera
ENSGAGG00000012039	-	99	38.135	ENSACLG00000013572	-	52	38.135	Astatotilapia_calliptera
ENSGAGG00000012039	-	99	44.280	ENSACLG00000009628	-	54	44.280	Astatotilapia_calliptera
ENSGAGG00000012039	-	70	42.487	ENSACLG00000014439	-	98	42.487	Astatotilapia_calliptera
ENSGAGG00000012039	-	99	45.443	ENSACLG00000017161	-	54	45.320	Astatotilapia_calliptera
ENSGAGG00000012039	-	96	45.386	ENSACLG00000007343	-	97	45.386	Astatotilapia_calliptera
ENSGAGG00000012039	-	77	44.992	ENSACLG00000000367	-	70	45.238	Astatotilapia_calliptera
ENSGAGG00000012039	-	99	44.403	ENSACLG00000024091	-	54	44.403	Astatotilapia_calliptera
ENSGAGG00000012039	-	99	43.804	ENSACLG00000026879	-	54	43.804	Astatotilapia_calliptera
ENSGAGG00000012039	-	73	45.050	ENSACLG00000001563	-	60	45.050	Astatotilapia_calliptera
ENSGAGG00000012039	-	99	40.382	ENSACLG00000000499	-	52	40.382	Astatotilapia_calliptera
ENSGAGG00000012039	-	99	40.168	ENSACLG00000018181	-	87	40.168	Astatotilapia_calliptera
ENSGAGG00000012039	-	99	47.666	ENSACLG00000014619	-	55	47.666	Astatotilapia_calliptera
ENSGAGG00000012039	-	99	44.363	ENSACLG00000025719	-	54	44.363	Astatotilapia_calliptera
ENSGAGG00000012039	-	59	42.222	ENSACLG00000005569	-	100	42.222	Astatotilapia_calliptera
ENSGAGG00000012039	-	99	40.380	ENSACLG00000002180	-	55	40.380	Astatotilapia_calliptera
ENSGAGG00000012039	-	99	40.502	ENSACLG00000017808	-	52	40.502	Astatotilapia_calliptera
ENSGAGG00000012039	-	82	37.857	ENSAMXG00000043892	-	89	38.244	Astyanax_mexicanus
ENSGAGG00000012039	-	99	39.188	ENSAMXG00000038578	-	61	39.188	Astyanax_mexicanus
ENSGAGG00000012039	-	99	40.357	ENSAMXG00000031698	-	52	40.357	Astyanax_mexicanus
ENSGAGG00000012039	-	99	45.623	ENSAMXG00000030987	-	55	45.721	Astyanax_mexicanus
ENSGAGG00000012039	-	69	47.159	ENSAMXG00000037673	-	70	47.159	Astyanax_mexicanus
ENSGAGG00000012039	-	99	38.737	ENSAMXG00000040892	-	53	38.975	Astyanax_mexicanus
ENSGAGG00000012039	-	99	46.437	ENSAMXG00000038169	-	64	46.437	Astyanax_mexicanus
ENSGAGG00000012039	-	76	82.372	ENSCPBG00000008522	-	100	82.372	Chrysemys_picta_bellii
ENSGAGG00000012039	-	91	81.915	ENSCPBG00000011626	-	90	81.915	Chrysemys_picta_bellii
ENSGAGG00000012039	-	69	90.141	ENSCPBG00000024252	-	100	90.141	Chrysemys_picta_bellii
ENSGAGG00000012039	-	51	89.524	ENSCPBG00000002218	-	100	89.524	Chrysemys_picta_bellii
ENSGAGG00000012039	-	68	42.756	ENSCPBG00000003152	-	99	42.756	Chrysemys_picta_bellii
ENSGAGG00000012039	-	65	88.246	ENSCPBG00000001477	-	100	88.246	Chrysemys_picta_bellii
ENSGAGG00000012039	-	96	40.098	ENSCVAG00000009912	-	99	40.098	Cyprinodon_variegatus
ENSGAGG00000012039	-	99	39.336	ENSELUG00000000948	-	71	39.336	Esox_lucius
ENSGAGG00000012039	-	91	45.053	ENSGAFG00000009062	-	98	45.101	Gambusia_affinis
ENSGAGG00000012039	-	53	42.152	ENSGAFG00000012710	-	100	42.152	Gambusia_affinis
ENSGAGG00000012039	-	99	45.577	ENSIPUG00000000601	-	89	45.577	Ictalurus_punctatus
ENSGAGG00000012039	-	96	38.177	ENSMAMG00000018393	-	74	38.177	Mastacembelus_armatus
ENSGAGG00000012039	-	99	42.874	ENSMZEG00005000633	-	78	42.874	Maylandia_zebra
ENSGAGG00000012039	-	81	43.498	ENSMALG00000019305	-	100	43.498	Monopterus_albus
ENSGAGG00000012039	-	99	39.448	ENSORLG00000029874	-	53	39.448	Oryzias_latipes
ENSGAGG00000012039	-	66	42.599	ENSORLG00000029791	-	77	42.599	Oryzias_latipes
ENSGAGG00000012039	-	99	45.138	ENSORLG00000027568	-	54	45.138	Oryzias_latipes
ENSGAGG00000012039	-	99	45.443	ENSORLG00000024904	-	55	45.443	Oryzias_latipes
ENSGAGG00000012039	-	99	45.366	ENSORLG00000026665	-	54	45.366	Oryzias_latipes
ENSGAGG00000012039	-	87	45.179	ENSORLG00000022369	-	51	45.179	Oryzias_latipes
ENSGAGG00000012039	-	99	45.267	ENSORLG00000028795	-	55	45.267	Oryzias_latipes
ENSGAGG00000012039	-	99	39.068	ENSORLG00000029675	-	53	39.068	Oryzias_latipes
ENSGAGG00000012039	-	99	45.244	ENSORLG00000024233	-	54	45.244	Oryzias_latipes
ENSGAGG00000012039	-	99	45.267	ENSORLG00000028609	-	55	45.267	Oryzias_latipes
ENSGAGG00000012039	-	99	40.168	ENSORLG00000026629	-	53	40.168	Oryzias_latipes
ENSGAGG00000012039	-	99	45.138	ENSORLG00000024220	-	54	45.138	Oryzias_latipes
ENSGAGG00000012039	-	97	40.321	ENSORLG00000028632	-	76	40.247	Oryzias_latipes
ENSGAGG00000012039	-	99	45.258	ENSORLG00000025739	-	54	45.258	Oryzias_latipes
ENSGAGG00000012039	-	92	45.166	ENSORLG00000025478	-	97	45.166	Oryzias_latipes
ENSGAGG00000012039	-	99	40.168	ENSORLG00000026676	-	86	40.168	Oryzias_latipes
ENSGAGG00000012039	-	99	40.168	ENSORLG00000026873	-	53	40.168	Oryzias_latipes
ENSGAGG00000012039	-	99	40.048	ENSORLG00000023181	-	53	40.048	Oryzias_latipes
ENSGAGG00000012039	-	99	45.138	ENSORLG00000030265	-	54	45.138	Oryzias_latipes
ENSGAGG00000012039	-	99	45.388	ENSORLG00000030542	-	55	45.388	Oryzias_latipes
ENSGAGG00000012039	-	99	46.098	ENSORLG00000027831	-	54	46.098	Oryzias_latipes
ENSGAGG00000012039	-	99	45.000	ENSORLG00000026546	-	54	45.000	Oryzias_latipes
ENSGAGG00000012039	-	73	42.029	ENSORLG00020002554	-	95	42.029	Oryzias_latipes_hni
ENSGAGG00000012039	-	97	44.926	ENSORLG00020020268	-	54	44.926	Oryzias_latipes_hni
ENSGAGG00000012039	-	99	45.200	ENSORLG00020014203	-	54	45.200	Oryzias_latipes_hni
ENSGAGG00000012039	-	99	45.258	ENSORLG00020008293	-	54	45.258	Oryzias_latipes_hni
ENSGAGG00000012039	-	99	45.894	ENSORLG00020001422	-	55	45.894	Oryzias_latipes_hni
ENSGAGG00000012039	-	99	45.200	ENSORLG00020003869	-	54	45.200	Oryzias_latipes_hni
ENSGAGG00000012039	-	99	45.510	ENSORLG00015018878	-	55	45.510	Oryzias_latipes_hsok
ENSGAGG00000012039	-	99	45.510	ENSORLG00015017778	-	55	45.510	Oryzias_latipes_hsok
ENSGAGG00000012039	-	99	45.966	ENSOMEG00000003712	-	55	45.966	Oryzias_melastigma
ENSGAGG00000012039	-	79	40.390	ENSOMEG00000006705	-	91	40.390	Oryzias_melastigma
ENSGAGG00000012039	-	99	39.021	ENSOMEG00000009987	-	55	39.021	Oryzias_melastigma
ENSGAGG00000012039	-	79	39.732	ENSPKIG00000000391	-	98	39.732	Paramormyrops_kingsleyae
ENSGAGG00000012039	-	51	39.785	ENSPKIG00000015325	-	88	39.785	Paramormyrops_kingsleyae
ENSGAGG00000012039	-	92	45.310	ENSPSIG00000013781	-	100	45.310	Pelodiscus_sinensis
ENSGAGG00000012039	-	99	44.649	ENSPSIG00000000767	-	58	44.649	Pelodiscus_sinensis
ENSGAGG00000012039	-	99	45.320	ENSPSIG00000000489	-	56	45.320	Pelodiscus_sinensis
ENSGAGG00000012039	-	99	46.201	ENSPSIG00000001658	-	93	46.201	Pelodiscus_sinensis
ENSGAGG00000012039	-	96	45.330	ENSPSIG00000000994	-	57	45.330	Pelodiscus_sinensis
ENSGAGG00000012039	-	99	44.975	ENSPSIG00000000353	-	70	44.975	Pelodiscus_sinensis
ENSGAGG00000012039	-	95	43.782	ENSPMEG00000019585	-	99	43.782	Poecilia_mexicana
ENSGAGG00000012039	-	96	45.088	ENSPMEG00000016355	-	65	45.088	Poecilia_mexicana
ENSGAGG00000012039	-	73	41.413	ENSPMEG00000020606	-	99	41.413	Poecilia_mexicana
ENSGAGG00000012039	-	99	38.981	ENSPREG00000004954	-	55	38.981	Poecilia_reticulata
ENSGAGG00000012039	-	99	40.306	ENSPREG00000000390	-	54	40.306	Poecilia_reticulata
ENSGAGG00000012039	-	99	43.101	ENSSDUG00000002460	-	65	43.101	Seriola_dumerili
ENSGAGG00000012039	-	68	37.083	ENSTNIG00000001462	-	99	37.083	Tetraodon_nigroviridis
ENSGAGG00000012039	-	99	40.909	ENSXMAG00000023079	-	55	40.909	Xiphophorus_maculatus
ENSGAGG00000012039	-	99	39.383	ENSXMAG00000021298	-	53	39.383	Xiphophorus_maculatus
ENSGAGG00000012039	-	99	39.524	ENSXMAG00000023319	-	52	39.524	Xiphophorus_maculatus
ENSGAGG00000012039	-	89	45.492	ENSXMAG00000030100	-	53	45.196	Xiphophorus_maculatus
ENSGAGG00000012039	-	99	41.417	ENSXMAG00000021213	-	55	41.417	Xiphophorus_maculatus
ENSGAGG00000012039	-	59	41.889	ENSXMAG00000025770	-	100	41.889	Xiphophorus_maculatus
ENSGAGG00000012039	-	99	46.267	ENSXMAG00000026031	-	55	45.995	Xiphophorus_maculatus
ENSGAGG00000012039	-	99	40.431	ENSXMAG00000023503	-	55	40.431	Xiphophorus_maculatus
ENSGAGG00000012039	-	99	41.727	ENSXMAG00000026594	-	55	41.727	Xiphophorus_maculatus
ENSGAGG00000012039	-	99	41.727	ENSXMAG00000030089	-	79	41.727	Xiphophorus_maculatus