EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000012143 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 11212 bases
Position: chrPPEB01000100.1:297313-308524
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000016181	S1-like	PF14444.6	5.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000018475	-	3964	-	ENSGAGP00000016181	935 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000012143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000012143's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000012143	-	64	38.140	ENSGAGG00000022022	CCAR1	74	40.798

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000012143	-	98	60.490	ENSG00000158941	CCAR2	99	84.932	Homo_sapiens
ENSGAGG00000012143	-	50	57.333	ENSG00000060339	CCAR1	68	57.333	Homo_sapiens
ENSGAGG00000012143	-	52	65.574	ENSAPOG00000019427	ccar1	66	59.494	Acanthochromis_polyacanthus
ENSGAGG00000012143	-	62	39.597	ENSAMEG00000018003	CCAR1	73	40.444	Ailuropoda_melanoleuca
ENSGAGG00000012143	-	98	59.462	ENSAMEG00000003044	CCAR2	98	60.128	Ailuropoda_melanoleuca
ENSGAGG00000012143	-	52	65.574	ENSAOCG00000004413	ccar1	67	59.494	Amphiprion_ocellaris
ENSGAGG00000012143	-	73	65.574	ENSATEG00000001698	ccar1	66	59.494	Anabas_testudineus
ENSGAGG00000012143	-	65	38.043	ENSACAG00000009927	CCAR1	74	40.870	Anolis_carolinensis
ENSGAGG00000012143	-	98	72.785	ENSACAG00000023505	CCAR2	97	72.834	Anolis_carolinensis
ENSGAGG00000012143	-	63	40.201	ENSANAG00000023002	CCAR1	74	40.444	Aotus_nancymaae
ENSGAGG00000012143	-	98	60.557	ENSANAG00000037041	CCAR2	98	60.299	Aotus_nancymaae
ENSGAGG00000012143	-	61	39.120	ENSAMXG00000019358	ccar2	99	38.278	Astyanax_mexicanus
ENSGAGG00000012143	-	50	59.722	ENSAMXG00000001383	ccar1	72	38.852	Astyanax_mexicanus
ENSGAGG00000012143	-	98	57.663	ENSBTAG00000005469	CCAR2	98	58.466	Bos_taurus
ENSGAGG00000012143	-	63	39.693	ENSBTAG00000033457	CCAR1	74	40.444	Bos_taurus
ENSGAGG00000012143	-	50	45.205	WBGene00003085	ccar-1	52	45.455	Caenorhabditis_elegans
ENSGAGG00000012143	-	98	60.450	ENSCJAG00000020174	CCAR2	98	60.192	Callithrix_jacchus
ENSGAGG00000012143	-	63	41.206	ENSCJAG00000018912	CCAR1	74	40.444	Callithrix_jacchus
ENSGAGG00000012143	-	62	39.698	ENSCAFG00000013761	CCAR1	73	40.444	Canis_familiaris
ENSGAGG00000012143	-	98	60.345	ENSCAFG00000009285	CCAR2	98	60.385	Canis_familiaris
ENSGAGG00000012143	-	63	39.698	ENSCAFG00020026013	CCAR1	74	40.444	Canis_lupus_dingo
ENSGAGG00000012143	-	98	58.262	ENSCHIG00000007510	CCAR2	98	58.617	Capra_hircus
ENSGAGG00000012143	-	63	39.693	ENSCHIG00000000354	CCAR1	74	40.444	Capra_hircus
ENSGAGG00000012143	-	98	60.193	ENSTSYG00000001104	CCAR2	98	59.509	Carlito_syrichta
ENSGAGG00000012143	-	62	40.201	ENSTSYG00000010684	CCAR1	74	40.444	Carlito_syrichta
ENSGAGG00000012143	-	98	59.267	ENSCPOG00000010985	CCAR2	98	59.208	Cavia_porcellus
ENSGAGG00000012143	-	63	39.474	ENSCPOG00000004124	CCAR1	73	41.020	Cavia_porcellus
ENSGAGG00000012143	-	98	60.321	ENSCCAG00000026081	CCAR2	98	60.150	Cebus_capucinus
ENSGAGG00000012143	-	64	39.693	ENSCCAG00000020659	CCAR1	74	40.444	Cebus_capucinus
ENSGAGG00000012143	-	62	40.201	ENSCATG00000042598	CCAR1	74	40.133	Cercocebus_atys
ENSGAGG00000012143	-	98	60.280	ENSCATG00000031853	CCAR2	98	59.914	Cercocebus_atys
ENSGAGG00000012143	-	98	57.939	ENSCLAG00000014299	CCAR2	98	58.966	Chinchilla_lanigera
ENSGAGG00000012143	-	63	39.698	ENSCLAG00000011807	CCAR1	73	40.000	Chinchilla_lanigera
ENSGAGG00000012143	-	63	40.201	ENSCSAG00000007643	CCAR1	73	40.444	Chlorocebus_sabaeus
ENSGAGG00000012143	-	98	59.914	ENSCSAG00000016353	CCAR2	98	59.765	Chlorocebus_sabaeus
ENSGAGG00000012143	-	56	56.338	ENSCHOG00000002868	CCAR1	64	39.500	Choloepus_hoffmanni
ENSGAGG00000012143	-	61	56.567	ENSCHOG00000000997	-	99	56.293	Choloepus_hoffmanni
ENSGAGG00000012143	-	70	37.447	ENSCPBG00000019635	CCAR1	74	40.798	Chrysemys_picta_bellii
ENSGAGG00000012143	-	98	94.366	ENSCPBG00000002266	CCAR2	97	94.475	Chrysemys_picta_bellii
ENSGAGG00000012143	-	98	60.538	ENSCANG00000003001	CCAR2	98	59.914	Colobus_angolensis_palliatus
ENSGAGG00000012143	-	98	58.092	ENSCGRG00001010031	Ccar2	98	58.635	Cricetulus_griseus_chok1gshd
ENSGAGG00000012143	-	98	58.092	ENSCGRG00000005120	Ccar2	98	58.635	Cricetulus_griseus_crigri
ENSGAGG00000012143	-	52	65.574	ENSCVAG00000014095	ccar1	60	59.494	Cyprinodon_variegatus
ENSGAGG00000012143	-	92	30.552	ENSDARG00000038302	ccar2	94	51.887	Danio_rerio
ENSGAGG00000012143	-	98	59.462	ENSDNOG00000019561	CCAR2	98	60.383	Dasypus_novemcinctus
ENSGAGG00000012143	-	64	39.474	ENSDNOG00000007499	CCAR1	73	40.222	Dasypus_novemcinctus
ENSGAGG00000012143	-	98	59.677	ENSETEG00000013463	CCAR2	98	59.681	Echinops_telfairi
ENSGAGG00000012143	-	60	41.206	ENSETEG00000013025	CCAR1	67	34.642	Echinops_telfairi
ENSGAGG00000012143	-	63	40.201	ENSEASG00005015474	CCAR1	73	40.444	Equus_asinus_asinus
ENSGAGG00000012143	-	98	59.871	ENSEASG00005018793	CCAR2	98	60.388	Equus_asinus_asinus
ENSGAGG00000012143	-	63	40.201	ENSECAG00000016291	CCAR1	84	36.499	Equus_caballus
ENSGAGG00000012143	-	98	60.129	ENSECAG00000020651	CCAR2	92	60.172	Equus_caballus
ENSGAGG00000012143	-	59	36.429	ENSEEUG00000013822	CCAR1	73	37.292	Erinaceus_europaeus
ENSGAGG00000012143	-	98	59.526	ENSEEUG00000005728	CCAR2	98	59.613	Erinaceus_europaeus
ENSGAGG00000012143	-	60	59.211	ENSELUG00000022633	ccar1	56	59.494	Esox_lucius
ENSGAGG00000012143	-	63	39.698	ENSFCAG00000012676	CCAR1	74	40.444	Felis_catus
ENSGAGG00000012143	-	98	60.171	ENSFCAG00000005666	CCAR2	98	60.926	Felis_catus
ENSGAGG00000012143	-	98	59.081	ENSFDAG00000017209	CCAR2	98	59.208	Fukomys_damarensis
ENSGAGG00000012143	-	63	39.698	ENSFDAG00000007880	CCAR1	73	41.020	Fukomys_damarensis
ENSGAGG00000012143	-	52	65.574	ENSFHEG00000002061	ccar1	58	60.759	Fundulus_heteroclitus
ENSGAGG00000012143	-	51	54.930	ENSGMOG00000006757	ccar1	77	39.078	Gadus_morhua
ENSGAGG00000012143	-	63	40.704	ENSGGOG00000002776	CCAR1	74	40.444	Gorilla_gorilla
ENSGAGG00000012143	-	98	60.596	ENSGGOG00000002424	CCAR2	98	60.277	Gorilla_gorilla
ENSGAGG00000012143	-	52	65.574	ENSHBUG00000022896	ccar1	74	39.780	Haplochromis_burtoni
ENSGAGG00000012143	-	62	39.698	ENSHGLG00000012835	CCAR1	73	41.020	Heterocephalus_glaber_female
ENSGAGG00000012143	-	98	59.188	ENSHGLG00000015483	CCAR2	98	59.315	Heterocephalus_glaber_female
ENSGAGG00000012143	-	98	59.188	ENSHGLG00100005534	CCAR2	98	59.315	Heterocephalus_glaber_male
ENSGAGG00000012143	-	62	39.698	ENSHGLG00100017513	CCAR1	74	40.576	Heterocephalus_glaber_male
ENSGAGG00000012143	-	51	61.538	ENSIPUG00000005123	ccar1	64	61.765	Ictalurus_punctatus
ENSGAGG00000012143	-	75	34.622	ENSIPUG00000006666	ccar2	98	42.857	Ictalurus_punctatus
ENSGAGG00000012143	-	62	40.201	ENSSTOG00000001539	CCAR1	73	40.222	Ictidomys_tridecemlineatus
ENSGAGG00000012143	-	98	59.422	ENSSTOG00000011666	CCAR2	98	59.402	Ictidomys_tridecemlineatus
ENSGAGG00000012143	-	63	40.704	ENSJJAG00000024055	Ccar1	73	39.778	Jaculus_jaculus
ENSGAGG00000012143	-	60	45.041	ENSKMAG00000004397	ccar1	72	39.525	Kryptolebias_marmoratus
ENSGAGG00000012143	-	52	65.574	ENSLBEG00000007156	ccar1	57	59.494	Labrus_bergylta
ENSGAGG00000012143	-	98	43.770	ENSLACG00000011333	CCAR2	97	43.070	Latimeria_chalumnae
ENSGAGG00000012143	-	52	65.574	ENSLOCG00000009307	ccar1	63	65.625	Lepisosteus_oculatus
ENSGAGG00000012143	-	98	59.271	ENSLAFG00000018459	CCAR2	98	59.613	Loxodonta_africana
ENSGAGG00000012143	-	92	35.076	ENSLAFG00000006177	CCAR1	97	35.410	Loxodonta_africana
ENSGAGG00000012143	-	98	60.108	ENSMFAG00000044671	CCAR2	98	60.192	Macaca_fascicularis
ENSGAGG00000012143	-	62	41.270	ENSMFAG00000035410	CCAR1	75	40.444	Macaca_fascicularis
ENSGAGG00000012143	-	50	57.333	ENSMMUG00000016652	CCAR1	68	57.333	Macaca_mulatta
ENSGAGG00000012143	-	98	60.107	ENSMMUG00000021991	CCAR2	98	60.043	Macaca_mulatta
ENSGAGG00000012143	-	98	60.043	ENSMNEG00000031023	CCAR2	98	60.085	Macaca_nemestrina
ENSGAGG00000012143	-	63	39.693	ENSMNEG00000009193	CCAR1	74	40.444	Macaca_nemestrina
ENSGAGG00000012143	-	98	60.280	ENSMLEG00000037244	CCAR2	98	59.914	Mandrillus_leucophaeus
ENSGAGG00000012143	-	63	40.201	ENSMLEG00000033748	CCAR1	74	40.444	Mandrillus_leucophaeus
ENSGAGG00000012143	-	52	65.574	ENSMAMG00000000309	ccar1	66	59.494	Mastacembelus_armatus
ENSGAGG00000012143	-	98	58.925	ENSMAUG00000011127	Ccar2	98	59.227	Mesocricetus_auratus
ENSGAGG00000012143	-	98	60.580	ENSMICG00000007751	CCAR2	98	60.473	Microcebus_murinus
ENSGAGG00000012143	-	63	40.201	ENSMICG00000007448	CCAR1	74	37.300	Microcebus_murinus
ENSGAGG00000012143	-	98	58.297	ENSMOCG00000017002	Ccar2	98	58.422	Microtus_ochrogaster
ENSGAGG00000012143	-	64	40.094	ENSMODG00000017358	CCAR1	74	41.739	Monodelphis_domestica
ENSGAGG00000012143	-	92	54.727	ENSMODG00000009328	CCAR2	99	54.298	Monodelphis_domestica
ENSGAGG00000012143	-	50	65.574	ENSMALG00000018301	ccar1	72	40.291	Monopterus_albus
ENSGAGG00000012143	-	98	58.735	MGP_CAROLIEiJ_G0019474	Ccar2	98	59.125	Mus_caroli
ENSGAGG00000012143	-	98	58.414	ENSMUSG00000033712	Ccar2	98	58.805	Mus_musculus
ENSGAGG00000012143	-	98	58.037	MGP_PahariEiJ_G0030491	Ccar2	98	59.275	Mus_pahari
ENSGAGG00000012143	-	98	57.759	MGP_SPRETEiJ_G0020366	Ccar2	98	58.698	Mus_spretus
ENSGAGG00000012143	-	62	39.698	ENSMPUG00000004618	CCAR1	73	40.444	Mustela_putorius_furo
ENSGAGG00000012143	-	98	59.957	ENSMPUG00000003486	CCAR2	97	60.538	Mustela_putorius_furo
ENSGAGG00000012143	-	98	59.850	ENSMLUG00000005567	CCAR2	98	60.818	Myotis_lucifugus
ENSGAGG00000012143	-	98	60.622	ENSNLEG00000015683	CCAR2	98	59.979	Nomascus_leucogenys
ENSGAGG00000012143	-	63	40.201	ENSNLEG00000011679	CCAR1	74	40.444	Nomascus_leucogenys
ENSGAGG00000012143	-	77	82.301	ENSMEUG00000002163	CCAR2	84	82.301	Notamacropus_eugenii
ENSGAGG00000012143	-	98	58.974	ENSOPRG00000013271	CCAR2	98	59.173	Ochotona_princeps
ENSGAGG00000012143	-	98	58.191	ENSODEG00000008466	CCAR2	98	58.280	Octodon_degus
ENSGAGG00000012143	-	52	65.574	ENSONIG00000018419	ccar1	74	39.693	Oreochromis_niloticus
ENSGAGG00000012143	-	98	58.002	ENSOCUG00000013228	CCAR2	98	59.655	Oryctolagus_cuniculus
ENSGAGG00000012143	-	75	65.574	ENSORLG00020004040	ccar1	60	59.494	Oryzias_latipes_hni
ENSGAGG00000012143	-	75	65.574	ENSORLG00015009157	ccar1	60	59.494	Oryzias_latipes_hsok
ENSGAGG00000012143	-	52	65.574	ENSOMEG00000003998	ccar1	60	59.494	Oryzias_melastigma
ENSGAGG00000012143	-	98	60.473	ENSOGAG00000010578	CCAR2	98	60.515	Otolemur_garnettii
ENSGAGG00000012143	-	63	40.201	ENSOGAG00000013294	CCAR1	73	40.444	Otolemur_garnettii
ENSGAGG00000012143	-	98	57.985	ENSOARG00000010234	CCAR2	98	58.342	Ovis_aries
ENSGAGG00000012143	-	63	39.693	ENSOARG00000005203	CCAR1	73	40.444	Ovis_aries
ENSGAGG00000012143	-	71	39.698	ENSPPAG00000035962	CCAR1	73	40.444	Pan_paniscus
ENSGAGG00000012143	-	98	59.197	ENSPPAG00000041119	CCAR2	98	58.879	Pan_paniscus
ENSGAGG00000012143	-	98	60.171	ENSPPRG00000013075	CCAR2	98	60.926	Panthera_pardus
ENSGAGG00000012143	-	63	39.698	ENSPPRG00000022293	CCAR1	74	40.444	Panthera_pardus
ENSGAGG00000012143	-	63	39.698	ENSPTIG00000009648	CCAR1	74	40.444	Panthera_tigris_altaica
ENSGAGG00000012143	-	98	60.171	ENSPTIG00000019114	CCAR2	98	60.926	Panthera_tigris_altaica
ENSGAGG00000012143	-	63	40.201	ENSPTRG00000002560	CCAR1	74	40.444	Pan_troglodytes
ENSGAGG00000012143	-	98	60.383	ENSPTRG00000020065	CCAR2	98	60.064	Pan_troglodytes
ENSGAGG00000012143	-	98	60.280	ENSPANG00000018828	CCAR2	98	59.914	Papio_anubis
ENSGAGG00000012143	-	64	39.597	ENSPANG00000022123	CCAR1	74	40.444	Papio_anubis
ENSGAGG00000012143	-	92	33.595	ENSPKIG00000018955	ccar2	96	32.924	Paramormyrops_kingsleyae
ENSGAGG00000012143	-	98	84.746	ENSPSIG00000017945	CCAR2	98	85.064	Pelodiscus_sinensis
ENSGAGG00000012143	-	64	38.605	ENSPSIG00000005136	CCAR1	73	40.576	Pelodiscus_sinensis
ENSGAGG00000012143	-	68	45.798	ENSPMGG00000010385	ccar1	74	39.083	Periophthalmus_magnuspinnatus
ENSGAGG00000012143	-	98	58.235	ENSPEMG00000009116	Ccar2	98	59.168	Peromyscus_maniculatus_bairdii
ENSGAGG00000012143	-	98	60.832	ENSPCIG00000004974	CCAR2	97	61.010	Phascolarctos_cinereus
ENSGAGG00000012143	-	64	41.038	ENSPCIG00000016044	CCAR1	84	35.638	Phascolarctos_cinereus
ENSGAGG00000012143	-	52	65.574	ENSPFOG00000003164	ccar1	72	35.060	Poecilia_formosa
ENSGAGG00000012143	-	52	65.574	ENSPMEG00000003026	ccar1	76	39.035	Poecilia_mexicana
ENSGAGG00000012143	-	63	40.201	ENSPPYG00000002392	CCAR1	73	40.444	Pongo_abelii
ENSGAGG00000012143	-	98	60.129	ENSPPYG00000018426	CCAR2	98	59.957	Pongo_abelii
ENSGAGG00000012143	-	92	59.310	ENSPCAG00000007376	CCAR2	92	59.635	Procavia_capensis
ENSGAGG00000012143	-	71	42.568	ENSPCOG00000020489	CCAR1	86	34.689	Propithecus_coquereli
ENSGAGG00000012143	-	98	59.914	ENSPCOG00000023051	CCAR2	98	60.365	Propithecus_coquereli
ENSGAGG00000012143	-	98	57.985	ENSPVAG00000006188	CCAR2	98	59.591	Pteropus_vampyrus
ENSGAGG00000012143	-	74	63.077	ENSPNAG00000026936	ccar1	65	57.317	Pygocentrus_nattereri
ENSGAGG00000012143	-	98	58.513	ENSRNOG00000018295	Ccar2	98	59.062	Rattus_norvegicus
ENSGAGG00000012143	-	50	57.746	ENSRBIG00000042226	CCAR1	72	40.444	Rhinopithecus_bieti
ENSGAGG00000012143	-	98	60.430	ENSRBIG00000028654	CCAR2	98	59.807	Rhinopithecus_bieti
ENSGAGG00000012143	-	98	60.430	ENSRROG00000034417	CCAR2	98	59.807	Rhinopithecus_roxellana
ENSGAGG00000012143	-	63	40.201	ENSRROG00000039231	CCAR1	74	40.444	Rhinopithecus_roxellana
ENSGAGG00000012143	-	98	60.450	ENSSBOG00000033571	CCAR2	98	59.722	Saimiri_boliviensis_boliviensis
ENSGAGG00000012143	-	76	40.201	ENSSBOG00000030420	CCAR1	85	36.393	Saimiri_boliviensis_boliviensis
ENSGAGG00000012143	-	94	60.562	ENSSHAG00000018601	CCAR2	93	60.538	Sarcophilus_harrisii
ENSGAGG00000012143	-	64	39.252	ENSSHAG00000007504	CCAR1	74	40.741	Sarcophilus_harrisii
ENSGAGG00000012143	-	50	65.574	ENSSMAG00000002119	ccar1	71	40.132	Scophthalmus_maximus
ENSGAGG00000012143	-	52	65.574	ENSSDUG00000009187	ccar1	71	36.855	Seriola_dumerili
ENSGAGG00000012143	-	62	40.359	ENSSARG00000002783	CCAR1	69	41.111	Sorex_araneus
ENSGAGG00000012143	-	98	54.286	ENSSARG00000003864	CCAR2	98	55.026	Sorex_araneus
ENSGAGG00000012143	-	98	77.849	ENSSPUG00000012349	CCAR2	98	78.594	Sphenodon_punctatus
ENSGAGG00000012143	-	52	65.574	ENSSPAG00000021364	ccar1	66	59.494	Stegastes_partitus
ENSGAGG00000012143	-	63	40.201	ENSSSCG00000010243	CCAR1	74	40.444	Sus_scrofa
ENSGAGG00000012143	-	98	60.343	ENSSSCG00000009628	CCAR2	98	61.356	Sus_scrofa
ENSGAGG00000012143	-	90	78.903	ENSTBEG00000010135	CCAR2	89	78.903	Tupaia_belangeri
ENSGAGG00000012143	-	93	56.098	ENSTTRG00000012752	CCAR2	98	51.724	Tursiops_truncatus
ENSGAGG00000012143	-	57	44.366	ENSTTRG00000001567	CCAR1	68	39.778	Tursiops_truncatus
ENSGAGG00000012143	-	98	60.000	ENSUAMG00000024919	CCAR2	98	60.235	Ursus_americanus
ENSGAGG00000012143	-	64	39.698	ENSUAMG00000016493	CCAR1	74	40.444	Ursus_americanus
ENSGAGG00000012143	-	98	60.000	ENSUMAG00000004780	CCAR2	98	60.235	Ursus_maritimus
ENSGAGG00000012143	-	63	39.698	ENSUMAG00000007561	CCAR1	74	40.444	Ursus_maritimus
ENSGAGG00000012143	-	56	61.644	ENSVPAG00000011822	CCAR1	53	61.842	Vicugna_pacos
ENSGAGG00000012143	-	98	60.453	ENSVVUG00000005152	CCAR2	98	60.493	Vulpes_vulpes
ENSGAGG00000012143	-	62	39.698	ENSVVUG00000020327	CCAR1	75	40.444	Vulpes_vulpes
ENSGAGG00000012143	-	57	47.423	ENSXETG00000008844	ccar1	72	39.956	Xenopus_tropicalis
ENSGAGG00000012143	-	52	65.574	ENSXMAG00000002765	ccar1	58	60.759	Xiphophorus_maculatus