EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000012176 (Gene tree)
Gene ID: -
Gene Symbol: CNOT6
Alias: CCR4|Ccr4a|KIAA1194
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 19126 bases
Position: chrPPEB01000101.1:19229-38354
Accession: 14099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000016242	Exo_endo_phos	PF03372.23	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000018542	CNOT6-201	1515	-	ENSGAGP00000016242	504 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000012176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000012176's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000012176	CNOT6	86	62.705	ENSGAGG00000008605	CNOT6L	93	62.705

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000012176	CNOT6	100	79.174	ENSG00000113300	CNOT6	100	94.737	Homo_sapiens
ENSGAGG00000012176	CNOT6	100	72.321	ENSAPOG00000009994	cnot6b	100	71.964	Acanthochromis_polyacanthus
ENSGAGG00000012176	CNOT6	100	80.143	ENSAMEG00000000949	CNOT6	99	80.143	Ailuropoda_melanoleuca
ENSGAGG00000012176	CNOT6	100	71.607	ENSACIG00000016566	cnot6b	100	71.250	Amphilophus_citrinellus
ENSGAGG00000012176	CNOT6	100	72.321	ENSAOCG00000006893	cnot6b	100	71.964	Amphiprion_ocellaris
ENSGAGG00000012176	CNOT6	100	72.321	ENSAPEG00000016949	cnot6b	100	71.964	Amphiprion_percula
ENSGAGG00000012176	CNOT6	100	71.735	ENSATEG00000007862	cnot6b	100	71.377	Anabas_testudineus
ENSGAGG00000012176	CNOT6	100	81.688	ENSAPLG00000012715	CNOT6	99	81.688	Anas_platyrhynchos
ENSGAGG00000012176	CNOT6	100	79.533	ENSACAG00000016548	CNOT6	100	79.533	Anolis_carolinensis
ENSGAGG00000012176	CNOT6	100	79.533	ENSANAG00000030436	CNOT6	96	79.533	Aotus_nancymaae
ENSGAGG00000012176	CNOT6	100	70.893	ENSACLG00000008279	cnot6b	100	71.429	Astatotilapia_calliptera
ENSGAGG00000012176	CNOT6	100	70.841	ENSAMXG00000034694	cnot6b	100	70.841	Astyanax_mexicanus
ENSGAGG00000012176	CNOT6	100	72.809	ENSAMXG00000019140	cnot6a	100	72.809	Astyanax_mexicanus
ENSGAGG00000012176	CNOT6	100	79.533	ENSBTAG00000017362	CNOT6	100	79.533	Bos_taurus
ENSGAGG00000012176	CNOT6	100	79.354	ENSCJAG00000009795	CNOT6	100	79.354	Callithrix_jacchus
ENSGAGG00000012176	CNOT6	100	80.251	ENSCAFG00000000464	CNOT6	100	80.251	Canis_familiaris
ENSGAGG00000012176	CNOT6	100	80.251	ENSCAFG00020002441	CNOT6	100	80.251	Canis_lupus_dingo
ENSGAGG00000012176	CNOT6	100	79.354	ENSCHIG00000019100	CNOT6	100	79.354	Capra_hircus
ENSGAGG00000012176	CNOT6	100	78.097	ENSTSYG00000003982	CNOT6	100	78.097	Carlito_syrichta
ENSGAGG00000012176	CNOT6	100	80.899	ENSCPOG00000035657	CNOT6	100	80.899	Cavia_porcellus
ENSGAGG00000012176	CNOT6	100	74.865	ENSCCAG00000033670	CNOT6	100	74.865	Cebus_capucinus
ENSGAGG00000012176	CNOT6	100	79.174	ENSCATG00000042014	CNOT6	100	79.174	Cercocebus_atys
ENSGAGG00000012176	CNOT6	100	78.097	ENSCLAG00000010489	CNOT6	100	78.097	Chinchilla_lanigera
ENSGAGG00000012176	CNOT6	100	79.174	ENSCSAG00000008165	CNOT6	100	79.174	Chlorocebus_sabaeus
ENSGAGG00000012176	CNOT6	100	79.713	ENSCHOG00000009680	CNOT6	100	79.713	Choloepus_hoffmanni
ENSGAGG00000012176	CNOT6	100	83.124	ENSCPBG00000008908	CNOT6	100	83.124	Chrysemys_picta_bellii
ENSGAGG00000012176	CNOT6	100	79.174	ENSCANG00000026756	CNOT6	100	79.174	Colobus_angolensis_palliatus
ENSGAGG00000012176	CNOT6	100	77.558	ENSCGRG00001011452	Cnot6	100	77.558	Cricetulus_griseus_chok1gshd
ENSGAGG00000012176	CNOT6	100	75.943	ENSCGRG00000010407	Cnot6	100	75.943	Cricetulus_griseus_crigri
ENSGAGG00000012176	CNOT6	100	71.607	ENSCSEG00000010939	cnot6b	100	71.250	Cynoglossus_semilaevis
ENSGAGG00000012176	CNOT6	100	71.685	ENSCVAG00000010538	cnot6b	100	71.326	Cyprinodon_variegatus
ENSGAGG00000012176	CNOT6	100	72.809	ENSDARG00000008255	cnot6a	100	72.809	Danio_rerio
ENSGAGG00000012176	CNOT6	100	70.841	ENSDARG00000101072	cnot6b	100	70.841	Danio_rerio
ENSGAGG00000012176	CNOT6	100	80.431	ENSDNOG00000041644	CNOT6	100	80.431	Dasypus_novemcinctus
ENSGAGG00000012176	CNOT6	100	68.402	ENSDORG00000001708	Cnot6	100	68.402	Dipodomys_ordii
ENSGAGG00000012176	CNOT6	92	83.582	ENSETEG00000006975	CNOT6	83	83.582	Echinops_telfairi
ENSGAGG00000012176	CNOT6	100	79.570	ENSEASG00005012794	-	100	79.570	Equus_asinus_asinus
ENSGAGG00000012176	CNOT6	89	73.000	ENSEASG00005012957	-	99	73.000	Equus_asinus_asinus
ENSGAGG00000012176	CNOT6	100	78.598	ENSECAG00000012704	-	99	78.598	Equus_caballus
ENSGAGG00000012176	CNOT6	100	79.892	ENSECAG00000019325	CNOT6	100	79.892	Equus_caballus
ENSGAGG00000012176	CNOT6	100	78.995	ENSEEUG00000015382	CNOT6	100	78.995	Erinaceus_europaeus
ENSGAGG00000012176	CNOT6	100	68.873	ENSELUG00000024580	cnot6a	100	68.873	Esox_lucius
ENSGAGG00000012176	CNOT6	100	70.609	ENSELUG00000015981	cnot6b	99	69.892	Esox_lucius
ENSGAGG00000012176	CNOT6	100	80.431	ENSFCAG00000001881	CNOT6	100	80.431	Felis_catus
ENSGAGG00000012176	CNOT6	100	81.867	ENSFALG00000007699	CNOT6	100	81.867	Ficedula_albicollis
ENSGAGG00000012176	CNOT6	100	77.917	ENSFDAG00000001999	CNOT6	100	77.917	Fukomys_damarensis
ENSGAGG00000012176	CNOT6	62	90.476	ENSFHEG00000013756	cnot6b	84	92.500	Fundulus_heteroclitus
ENSGAGG00000012176	CNOT6	94	69.811	ENSGMOG00000009767	cnot6b	99	69.811	Gadus_morhua
ENSGAGG00000012176	CNOT6	100	81.688	ENSGALG00000034316	CNOT6	100	81.688	Gallus_gallus
ENSGAGG00000012176	CNOT6	100	72.043	ENSGAFG00000008525	cnot6b	100	71.685	Gambusia_affinis
ENSGAGG00000012176	CNOT6	94	68.302	ENSGACG00000018046	cnot6b	99	68.302	Gasterosteus_aculeatus
ENSGAGG00000012176	CNOT6	100	79.174	ENSGGOG00000003675	CNOT6	100	79.174	Gorilla_gorilla
ENSGAGG00000012176	CNOT6	100	71.071	ENSHBUG00000002819	cnot6b	100	71.607	Haplochromis_burtoni
ENSGAGG00000012176	CNOT6	100	77.917	ENSHGLG00000017756	CNOT6	100	77.917	Heterocephalus_glaber_female
ENSGAGG00000012176	CNOT6	100	77.917	ENSHGLG00100005747	CNOT6	100	77.917	Heterocephalus_glaber_male
ENSGAGG00000012176	CNOT6	100	69.464	ENSHCOG00000016176	cnot6b	100	70.000	Hippocampus_comes
ENSGAGG00000012176	CNOT6	100	71.556	ENSIPUG00000019831	cnot6a	100	71.556	Ictalurus_punctatus
ENSGAGG00000012176	CNOT6	100	70.251	ENSIPUG00000017482	cnot6b	100	70.251	Ictalurus_punctatus
ENSGAGG00000012176	CNOT6	100	79.713	ENSSTOG00000002803	CNOT6	100	79.713	Ictidomys_tridecemlineatus
ENSGAGG00000012176	CNOT6	100	78.276	ENSJJAG00000012296	Cnot6	100	78.276	Jaculus_jaculus
ENSGAGG00000012176	CNOT6	100	72.760	ENSKMAG00000004640	cnot6b	100	72.401	Kryptolebias_marmoratus
ENSGAGG00000012176	CNOT6	100	70.179	ENSLBEG00000027917	cnot6b	100	70.714	Labrus_bergylta
ENSGAGG00000012176	CNOT6	100	75.806	ENSLOCG00000010102	cnot6b	99	75.806	Lepisosteus_oculatus
ENSGAGG00000012176	CNOT6	100	79.928	ENSLAFG00000016742	CNOT6	100	80.251	Loxodonta_africana
ENSGAGG00000012176	CNOT6	100	79.174	ENSMFAG00000030867	CNOT6	100	79.174	Macaca_fascicularis
ENSGAGG00000012176	CNOT6	100	79.174	ENSMMUG00000018690	CNOT6	100	79.174	Macaca_mulatta
ENSGAGG00000012176	CNOT6	100	79.174	ENSMNEG00000038565	CNOT6	100	79.174	Macaca_nemestrina
ENSGAGG00000012176	CNOT6	100	79.174	ENSMLEG00000010555	CNOT6	100	79.174	Mandrillus_leucophaeus
ENSGAGG00000012176	CNOT6	100	72.500	ENSMAMG00000007515	cnot6b	100	72.143	Mastacembelus_armatus
ENSGAGG00000012176	CNOT6	100	70.893	ENSMZEG00005012899	cnot6b	100	71.429	Maylandia_zebra
ENSGAGG00000012176	CNOT6	100	78.636	ENSMAUG00000019798	Cnot6	100	78.636	Mesocricetus_auratus
ENSGAGG00000012176	CNOT6	100	80.657	ENSMICG00000013018	-	100	80.657	Microcebus_murinus
ENSGAGG00000012176	CNOT6	97	70.501	ENSMICG00000028378	-	99	70.501	Microcebus_murinus
ENSGAGG00000012176	CNOT6	100	78.456	ENSMOCG00000021662	Cnot6	100	78.456	Microtus_ochrogaster
ENSGAGG00000012176	CNOT6	100	69.946	ENSMMOG00000003227	cnot6b	100	70.251	Mola_mola
ENSGAGG00000012176	CNOT6	100	80.072	ENSMODG00000003979	CNOT6	100	80.072	Monodelphis_domestica
ENSGAGG00000012176	CNOT6	100	72.500	ENSMALG00000014251	cnot6b	100	72.143	Monopterus_albus
ENSGAGG00000012176	CNOT6	100	78.636	MGP_CAROLIEiJ_G0016277	Cnot6	100	78.636	Mus_caroli
ENSGAGG00000012176	CNOT6	100	78.636	ENSMUSG00000020362	Cnot6	100	78.636	Mus_musculus
ENSGAGG00000012176	CNOT6	100	78.636	MGP_PahariEiJ_G0017413	Cnot6	100	78.636	Mus_pahari
ENSGAGG00000012176	CNOT6	100	78.456	MGP_SPRETEiJ_G0017122	Cnot6	100	78.456	Mus_spretus
ENSGAGG00000012176	CNOT6	100	80.251	ENSMPUG00000000587	CNOT6	96	80.251	Mustela_putorius_furo
ENSGAGG00000012176	CNOT6	100	77.758	ENSMLUG00000010257	CNOT6	100	77.758	Myotis_lucifugus
ENSGAGG00000012176	CNOT6	100	77.738	ENSNGAG00000008269	Cnot6	100	77.738	Nannospalax_galili
ENSGAGG00000012176	CNOT6	100	71.071	ENSNBRG00000010798	cnot6b	100	71.607	Neolamprologus_brichardi
ENSGAGG00000012176	CNOT6	100	77.917	ENSNLEG00000002322	CNOT6	100	77.917	Nomascus_leucogenys
ENSGAGG00000012176	CNOT6	82	96.262	ENSMEUG00000000025	CNOT6	74	96.262	Notamacropus_eugenii
ENSGAGG00000012176	CNOT6	87	94.286	ENSOPRG00000008244	-	88	94.286	Ochotona_princeps
ENSGAGG00000012176	CNOT6	100	77.061	ENSODEG00000007041	CNOT6	100	77.379	Octodon_degus
ENSGAGG00000012176	CNOT6	73	66.981	ENSONIG00000013027	cnot6b	99	67.376	Oreochromis_niloticus
ENSGAGG00000012176	CNOT6	100	79.713	ENSOANG00000010226	CNOT6	100	79.713	Ornithorhynchus_anatinus
ENSGAGG00000012176	CNOT6	100	78.354	ENSOCUG00000011083	CNOT6	100	78.354	Oryctolagus_cuniculus
ENSGAGG00000012176	CNOT6	100	71.250	ENSORLG00000005059	cnot6b	100	70.893	Oryzias_latipes
ENSGAGG00000012176	CNOT6	100	71.250	ENSORLG00020012784	cnot6b	100	70.893	Oryzias_latipes_hni
ENSGAGG00000012176	CNOT6	93	69.275	ENSORLG00015022658	cnot6b	98	68.893	Oryzias_latipes_hsok
ENSGAGG00000012176	CNOT6	100	71.429	ENSOMEG00000005295	cnot6b	100	71.071	Oryzias_melastigma
ENSGAGG00000012176	CNOT6	93	78.626	ENSOGAG00000032470	CNOT6	100	78.626	Otolemur_garnettii
ENSGAGG00000012176	CNOT6	97	78.782	ENSOARG00000001003	CNOT6	100	78.782	Ovis_aries
ENSGAGG00000012176	CNOT6	100	79.174	ENSPPAG00000032253	CNOT6	100	79.174	Pan_paniscus
ENSGAGG00000012176	CNOT6	100	80.251	ENSPPRG00000011912	CNOT6	100	80.251	Panthera_pardus
ENSGAGG00000012176	CNOT6	100	80.251	ENSPTIG00000016794	CNOT6	100	80.251	Panthera_tigris_altaica
ENSGAGG00000012176	CNOT6	100	79.174	ENSPTRG00000017636	CNOT6	100	79.174	Pan_troglodytes
ENSGAGG00000012176	CNOT6	100	79.174	ENSPANG00000016191	CNOT6	100	79.174	Papio_anubis
ENSGAGG00000012176	CNOT6	100	74.552	ENSPKIG00000021368	cnot6b	100	74.552	Paramormyrops_kingsleyae
ENSGAGG00000012176	CNOT6	97	82.537	ENSPSIG00000017307	CNOT6	100	82.537	Pelodiscus_sinensis
ENSGAGG00000012176	CNOT6	100	71.071	ENSPMGG00000011238	cnot6b	100	70.714	Periophthalmus_magnuspinnatus
ENSGAGG00000012176	CNOT6	100	77.558	ENSPEMG00000000627	Cnot6	100	77.558	Peromyscus_maniculatus_bairdii
ENSGAGG00000012176	CNOT6	100	80.251	ENSPCIG00000020319	CNOT6	99	80.251	Phascolarctos_cinereus
ENSGAGG00000012176	CNOT6	100	71.864	ENSPFOG00000006291	cnot6b	100	71.505	Poecilia_formosa
ENSGAGG00000012176	CNOT6	100	70.459	ENSPLAG00000008266	cnot6b	100	70.092	Poecilia_latipinna
ENSGAGG00000012176	CNOT6	100	72.043	ENSPMEG00000009091	cnot6b	100	71.685	Poecilia_mexicana
ENSGAGG00000012176	CNOT6	100	71.147	ENSPREG00000003713	cnot6b	100	70.789	Poecilia_reticulata
ENSGAGG00000012176	CNOT6	100	79.174	ENSPPYG00000016137	CNOT6	100	79.174	Pongo_abelii
ENSGAGG00000012176	CNOT6	78	93.609	ENSPCAG00000005599	-	71	93.609	Procavia_capensis
ENSGAGG00000012176	CNOT6	100	73.788	ENSPCOG00000017359	CNOT6	100	74.506	Propithecus_coquereli
ENSGAGG00000012176	CNOT6	100	74.865	ENSPVAG00000003069	CNOT6	100	74.865	Pteropus_vampyrus
ENSGAGG00000012176	CNOT6	100	70.893	ENSPNYG00000000321	cnot6b	100	71.735	Pundamilia_nyererei
ENSGAGG00000012176	CNOT6	100	72.451	ENSPNAG00000029586	cnot6a	100	72.451	Pygocentrus_nattereri
ENSGAGG00000012176	CNOT6	100	71.505	ENSPNAG00000028816	cnot6b	100	71.505	Pygocentrus_nattereri
ENSGAGG00000012176	CNOT6	100	77.558	ENSRNOG00000054891	Cnot6	100	77.558	Rattus_norvegicus
ENSGAGG00000012176	CNOT6	100	78.995	ENSRBIG00000004309	CNOT6	100	78.995	Rhinopithecus_bieti
ENSGAGG00000012176	CNOT6	100	78.995	ENSRROG00000035378	CNOT6	100	78.995	Rhinopithecus_roxellana
ENSGAGG00000012176	CNOT6	100	79.354	ENSSBOG00000030494	CNOT6	100	79.354	Saimiri_boliviensis_boliviensis
ENSGAGG00000012176	CNOT6	100	80.251	ENSSHAG00000017436	CNOT6	100	80.251	Sarcophilus_harrisii
ENSGAGG00000012176	CNOT6	100	73.882	ENSSFOG00015015133	CNOT6	100	73.882	Scleropages_formosus
ENSGAGG00000012176	CNOT6	100	72.272	ENSSFOG00015022383	cnot6a	96	72.272	Scleropages_formosus
ENSGAGG00000012176	CNOT6	100	71.377	ENSSMAG00000003084	cnot6b	100	71.020	Scophthalmus_maximus
ENSGAGG00000012176	CNOT6	100	72.143	ENSSDUG00000004151	cnot6b	100	71.786	Seriola_dumerili
ENSGAGG00000012176	CNOT6	100	71.250	ENSSLDG00000004448	cnot6b	100	71.786	Seriola_lalandi_dorsalis
ENSGAGG00000012176	CNOT6	100	80.824	ENSSPUG00000007893	CNOT6	100	81.149	Sphenodon_punctatus
ENSGAGG00000012176	CNOT6	100	72.321	ENSSPAG00000000149	cnot6b	100	71.964	Stegastes_partitus
ENSGAGG00000012176	CNOT6	100	79.713	ENSSSCG00000014009	CNOT6	100	79.713	Sus_scrofa
ENSGAGG00000012176	CNOT6	100	81.508	ENSTGUG00000001119	CNOT6	100	81.508	Taeniopygia_guttata
ENSGAGG00000012176	CNOT6	100	70.072	ENSTRUG00000002818	cnot6b	100	70.072	Takifugu_rubripes
ENSGAGG00000012176	CNOT6	100	70.430	ENSTNIG00000004443	cnot6b	99	70.430	Tetraodon_nigroviridis
ENSGAGG00000012176	CNOT6	52	92.188	ENSTBEG00000017094	-	54	92.188	Tupaia_belangeri
ENSGAGG00000012176	CNOT6	100	79.892	ENSTTRG00000009363	CNOT6	100	79.892	Tursiops_truncatus
ENSGAGG00000012176	CNOT6	75	75.291	ENSUAMG00000004579	CNOT6	88	75.291	Ursus_americanus
ENSGAGG00000012176	CNOT6	100	76.541	ENSUMAG00000024577	CNOT6	100	76.541	Ursus_maritimus
ENSGAGG00000012176	CNOT6	82	91.892	ENSVPAG00000003593	CNOT6	83	91.892	Vicugna_pacos
ENSGAGG00000012176	CNOT6	100	80.251	ENSVVUG00000026940	CNOT6	100	80.251	Vulpes_vulpes
ENSGAGG00000012176	CNOT6	100	71.009	ENSXCOG00000003360	cnot6b	100	70.642	Xiphophorus_couchianus
ENSGAGG00000012176	CNOT6	100	72.222	ENSXMAG00000008730	cnot6b	100	71.864	Xiphophorus_maculatus