EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000012452 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 11989 bases
Position: chrPPEB01012948.1:18-12006
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000016654	zf-C2H2	PF00096.26	4.7e-44	1	8
ENSGAGP00000016654	zf-C2H2	PF00096.26	4.7e-44	2	8
ENSGAGP00000016654	zf-C2H2	PF00096.26	4.7e-44	3	8
ENSGAGP00000016654	zf-C2H2	PF00096.26	4.7e-44	4	8
ENSGAGP00000016654	zf-C2H2	PF00096.26	4.7e-44	5	8
ENSGAGP00000016654	zf-C2H2	PF00096.26	4.7e-44	6	8
ENSGAGP00000016654	zf-C2H2	PF00096.26	4.7e-44	7	8
ENSGAGP00000016654	zf-C2H2	PF00096.26	4.7e-44	8	8
ENSGAGP00000016654	zf-met	PF12874.7	5.2e-07	1	2
ENSGAGP00000016654	zf-met	PF12874.7	5.2e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000019014	-	378	-	ENSGAGP00000016656	125 (aa)	-	-
ENSGAGT00000019012	-	1146	-	ENSGAGP00000016654	381 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000012452's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000012452's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000012452	-	89	62.085	ENSGAGG00000002828	-	85	62.085
ENSGAGG00000012452	-	74	41.048	ENSGAGG00000022571	ZNF319	93	41.704
ENSGAGG00000012452	-	93	62.343	ENSGAGG00000002179	-	99	62.343
ENSGAGG00000012452	-	62	35.714	ENSGAGG00000020362	PRDM5	72	35.556
ENSGAGG00000012452	-	93	49.746	ENSGAGG00000001645	-	89	65.517
ENSGAGG00000012452	-	93	68.996	ENSGAGG00000019349	-	96	68.996
ENSGAGG00000012452	-	98	66.667	ENSGAGG00000006683	-	96	71.271
ENSGAGG00000012452	-	93	61.413	ENSGAGG00000011487	-	91	61.413
ENSGAGG00000012452	-	77	53.937	ENSGAGG00000018885	-	66	53.937
ENSGAGG00000012452	-	89	53.043	ENSGAGG00000017640	-	84	52.885
ENSGAGG00000012452	-	82	77.027	ENSGAGG00000004740	-	98	71.121
ENSGAGG00000012452	-	96	69.828	ENSGAGG00000020594	-	99	69.828
ENSGAGG00000012452	-	76	65.306	ENSGAGG00000010492	-	86	65.306
ENSGAGG00000012452	-	73	56.838	ENSGAGG00000011366	-	94	56.838
ENSGAGG00000012452	-	69	49.776	ENSGAGG00000017094	-	50	49.776
ENSGAGG00000012452	-	61	71.739	ENSGAGG00000009739	-	99	71.739
ENSGAGG00000012452	-	76	62.694	ENSGAGG00000016529	-	89	62.694
ENSGAGG00000012452	-	69	62.500	ENSGAGG00000015451	-	89	68.030
ENSGAGG00000012452	-	98	66.812	ENSGAGG00000002214	-	96	66.812
ENSGAGG00000012452	-	93	60.699	ENSGAGG00000009272	-	98	63.235
ENSGAGG00000012452	-	68	51.744	ENSGAGG00000004926	-	92	51.744
ENSGAGG00000012452	-	93	68.559	ENSGAGG00000014356	-	89	68.559
ENSGAGG00000012452	-	86	68.534	ENSGAGG00000014389	-	99	69.649
ENSGAGG00000012452	-	83	54.106	ENSGAGG00000018445	-	91	53.774
ENSGAGG00000012452	-	81	66.883	ENSGAGG00000013851	-	92	66.883
ENSGAGG00000012452	-	87	60.256	ENSGAGG00000001387	-	71	60.256
ENSGAGG00000012452	-	84	70.659	ENSGAGG00000017986	-	97	69.231
ENSGAGG00000012452	-	67	57.798	ENSGAGG00000011399	-	84	54.271
ENSGAGG00000012452	-	98	71.067	ENSGAGG00000010833	-	96	71.067
ENSGAGG00000012452	-	70	54.741	ENSGAGG00000020168	-	70	54.741
ENSGAGG00000012452	-	70	39.241	ENSGAGG00000003095	ZNF865	80	40.686
ENSGAGG00000012452	-	87	64.655	ENSGAGG00000020134	-	68	64.655
ENSGAGG00000012452	-	76	53.738	ENSGAGG00000006848	-	62	53.738
ENSGAGG00000012452	-	71	56.485	ENSGAGG00000006846	-	89	56.485
ENSGAGG00000012452	-	69	70.202	ENSGAGG00000000971	-	92	70.202
ENSGAGG00000012452	-	92	46.667	ENSGAGG00000003883	ZNF236	61	46.667
ENSGAGG00000012452	-	77	45.230	ENSGAGG00000005331	-	88	44.803
ENSGAGG00000012452	-	67	38.503	ENSGAGG00000021631	ZNF652	55	38.503
ENSGAGG00000012452	-	84	67.485	ENSGAGG00000011574	-	96	67.485
ENSGAGG00000012452	-	97	59.746	ENSGAGG00000010324	-	92	59.746
ENSGAGG00000012452	-	93	64.681	ENSGAGG00000006323	-	93	65.532
ENSGAGG00000012452	-	93	71.200	ENSGAGG00000008773	-	88	71.200
ENSGAGG00000012452	-	95	40.299	ENSGAGG00000025218	ZBTB41	55	40.299
ENSGAGG00000012452	-	69	52.020	ENSGAGG00000013021	-	98	52.020
ENSGAGG00000012452	-	82	52.848	ENSGAGG00000005805	-	100	52.848
ENSGAGG00000012452	-	79	71.875	ENSGAGG00000007230	-	91	72.069
ENSGAGG00000012452	-	93	69.231	ENSGAGG00000006960	-	97	69.231
ENSGAGG00000012452	-	67	58.960	ENSGAGG00000015232	-	68	58.960
ENSGAGG00000012452	-	86	64.979	ENSGAGG00000001469	-	100	64.979

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000012452	-	62	60.156	ENSAMXG00000029161	-	80	60.156	Astyanax_mexicanus
ENSGAGG00000012452	-	92	63.636	ENSCPBG00000001421	-	99	61.538	Chrysemys_picta_bellii
ENSGAGG00000012452	-	94	72.826	ENSCPBG00000012976	-	99	70.400	Chrysemys_picta_bellii
ENSGAGG00000012452	-	94	69.397	ENSCPBG00000016841	-	99	67.722	Chrysemys_picta_bellii
ENSGAGG00000012452	-	92	47.978	ENSCPBG00000021487	-	89	49.041	Chrysemys_picta_bellii
ENSGAGG00000012452	-	94	69.828	ENSCPBG00000004030	-	95	69.828	Chrysemys_picta_bellii
ENSGAGG00000012452	-	94	67.857	ENSCPBG00000001272	-	95	67.857	Chrysemys_picta_bellii
ENSGAGG00000012452	-	93	66.667	ENSCPBG00000021479	-	96	66.667	Chrysemys_picta_bellii
ENSGAGG00000012452	-	93	65.238	ENSCPBG00000004990	-	100	61.803	Chrysemys_picta_bellii
ENSGAGG00000012452	-	93	61.165	ENSPSIG00000009893	-	97	61.165	Pelodiscus_sinensis
ENSGAGG00000012452	-	74	61.972	ENSPSIG00000002569	-	89	61.972	Pelodiscus_sinensis
ENSGAGG00000012452	-	80	55.598	ENSPSIG00000000522	-	98	55.598	Pelodiscus_sinensis
ENSGAGG00000012452	-	82	53.503	ENSPSIG00000015216	-	98	57.214	Pelodiscus_sinensis
ENSGAGG00000012452	-	93	52.964	ENSPSIG00000015465	-	95	52.964	Pelodiscus_sinensis
ENSGAGG00000012452	-	77	54.874	ENSPSIG00000001026	-	94	59.524	Pelodiscus_sinensis
ENSGAGG00000012452	-	94	60.385	ENSPSIG00000012865	-	96	60.385	Pelodiscus_sinensis
ENSGAGG00000012452	-	61	68.519	ENSTGUG00000018349	-	100	68.519	Taeniopygia_guttata
ENSGAGG00000012452	-	67	64.286	ENSTGUG00000018542	-	100	64.286	Taeniopygia_guttata
ENSGAGG00000012452	-	67	61.257	ENSTGUG00000014888	-	98	61.257	Taeniopygia_guttata
ENSGAGG00000012452	-	68	56.904	ENSTGUG00000016781	-	99	56.904	Taeniopygia_guttata
ENSGAGG00000012452	-	68	56.838	ENSTGUG00000016850	-	99	56.838	Taeniopygia_guttata
ENSGAGG00000012452	-	67	59.551	ENSTGUG00000014614	-	98	59.551	Taeniopygia_guttata
ENSGAGG00000012452	-	67	60.504	ENSTGUG00000018518	-	100	60.504	Taeniopygia_guttata
ENSGAGG00000012452	-	63	58.209	ENSTGUG00000018374	-	99	58.209	Taeniopygia_guttata
ENSGAGG00000012452	-	67	61.644	ENSTGUG00000016516	-	99	61.644	Taeniopygia_guttata
ENSGAGG00000012452	-	67	58.247	ENSTGUG00000018445	-	94	58.247	Taeniopygia_guttata
ENSGAGG00000012452	-	62	64.667	ENSTGUG00000018327	-	100	64.667	Taeniopygia_guttata
ENSGAGG00000012452	-	67	61.236	ENSTGUG00000013736	-	99	61.236	Taeniopygia_guttata
ENSGAGG00000012452	-	67	56.497	ENSTGUG00000015260	-	100	56.497	Taeniopygia_guttata