EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000012523 (Gene tree)
Gene ID: -
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 79214 bases
Position: chrPPEB01001368.1:31331-110544
Accession: 13995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000016776	zf-C2H2	PF00096.26	1.6e-31	1	4
ENSGAGP00000016776	zf-C2H2	PF00096.26	1.6e-31	2	4
ENSGAGP00000016776	zf-C2H2	PF00096.26	1.6e-31	3	4
ENSGAGP00000016776	zf-C2H2	PF00096.26	1.6e-31	4	4
ENSGAGP00000016759	zf-C2H2	PF00096.26	2.3e-31	1	4
ENSGAGP00000016759	zf-C2H2	PF00096.26	2.3e-31	2	4
ENSGAGP00000016759	zf-C2H2	PF00096.26	2.3e-31	3	4
ENSGAGP00000016759	zf-C2H2	PF00096.26	2.3e-31	4	4
ENSGAGP00000016769	zf-C2H2	PF00096.26	2.4e-31	1	4
ENSGAGP00000016769	zf-C2H2	PF00096.26	2.4e-31	2	4
ENSGAGP00000016769	zf-C2H2	PF00096.26	2.4e-31	3	4
ENSGAGP00000016769	zf-C2H2	PF00096.26	2.4e-31	4	4
ENSGAGP00000016752	zf-C2H2	PF00096.26	3.5e-31	1	4
ENSGAGP00000016752	zf-C2H2	PF00096.26	3.5e-31	2	4
ENSGAGP00000016752	zf-C2H2	PF00096.26	3.5e-31	3	4
ENSGAGP00000016752	zf-C2H2	PF00096.26	3.5e-31	4	4
ENSGAGP00000016763	zf-C2H2	PF00096.26	3.6e-31	1	4
ENSGAGP00000016763	zf-C2H2	PF00096.26	3.6e-31	2	4
ENSGAGP00000016763	zf-C2H2	PF00096.26	3.6e-31	3	4
ENSGAGP00000016763	zf-C2H2	PF00096.26	3.6e-31	4	4
ENSGAGP00000016783	zf-C2H2	PF00096.26	3.6e-31	1	4
ENSGAGP00000016783	zf-C2H2	PF00096.26	3.6e-31	2	4
ENSGAGP00000016783	zf-C2H2	PF00096.26	3.6e-31	3	4
ENSGAGP00000016783	zf-C2H2	PF00096.26	3.6e-31	4	4
ENSGAGP00000016776	zf-met	PF12874.7	0.00014	1	2
ENSGAGP00000016776	zf-met	PF12874.7	0.00014	2	2
ENSGAGP00000016759	zf-met	PF12874.7	0.00016	1	2
ENSGAGP00000016759	zf-met	PF12874.7	0.00016	2	2
ENSGAGP00000016769	zf-met	PF12874.7	0.00016	1	2
ENSGAGP00000016769	zf-met	PF12874.7	0.00016	2	2
ENSGAGP00000016752	zf-met	PF12874.7	0.00018	1	2
ENSGAGP00000016752	zf-met	PF12874.7	0.00018	2	2
ENSGAGP00000016763	zf-met	PF12874.7	0.00018	1	2
ENSGAGP00000016763	zf-met	PF12874.7	0.00018	2	2
ENSGAGP00000016783	zf-met	PF12874.7	0.00018	1	2
ENSGAGP00000016783	zf-met	PF12874.7	0.00018	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000019150	PRDM10-205	4375	-	ENSGAGP00000016776	1131 (aa)	-	-
ENSGAGT00000019123	PRDM10-201	5337	-	ENSGAGP00000016752	1208 (aa)	-	-
ENSGAGT00000019131	PRDM10-202	5196	-	ENSGAGP00000016759	1161 (aa)	-	-
ENSGAGT00000019142	PRDM10-204	4498	-	ENSGAGP00000016769	1172 (aa)	-	-
ENSGAGT00000019157	PRDM10-206	4665	-	ENSGAGP00000016783	1212 (aa)	-	-
ENSGAGT00000019135	PRDM10-203	4618	-	ENSGAGP00000016763	1212 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000012523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000012523's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000012523	PRDM10	55	37.900	ENSGAGG00000022082	PRDM15	74	37.900

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000012523	PRDM10	99	83.719	ENSG00000170325	PRDM10	100	83.805	Homo_sapiens
ENSGAGG00000012523	PRDM10	99	81.864	ENSAMEG00000002425	PRDM10	100	82.030	Ailuropoda_melanoleuca
ENSGAGG00000012523	PRDM10	99	93.599	ENSAPLG00000004858	PRDM10	100	93.080	Anas_platyrhynchos
ENSGAGG00000012523	PRDM10	99	70.855	ENSANAG00000022064	PRDM10	100	70.940	Aotus_nancymaae
ENSGAGG00000012523	PRDM10	99	82.975	ENSBTAG00000019001	PRDM10	100	82.956	Bos_taurus
ENSGAGG00000012523	PRDM10	99	83.962	ENSCJAG00000009235	PRDM10	100	83.962	Callithrix_jacchus
ENSGAGG00000012523	PRDM10	99	82.388	ENSCAFG00000010164	PRDM10	100	82.560	Canis_familiaris
ENSGAGG00000012523	PRDM10	99	81.266	ENSCAFG00020010152	PRDM10	100	82.860	Canis_lupus_dingo
ENSGAGG00000012523	PRDM10	99	82.889	ENSCHIG00000026530	PRDM10	100	82.717	Capra_hircus
ENSGAGG00000012523	PRDM10	99	84.147	ENSTSYG00000000544	PRDM10	100	84.233	Carlito_syrichta
ENSGAGG00000012523	PRDM10	99	75.765	ENSCAPG00000017296	PRDM10	98	78.679	Cavia_aperea
ENSGAGG00000012523	PRDM10	91	77.690	ENSCPOG00000000389	PRDM10	97	80.247	Cavia_porcellus
ENSGAGG00000012523	PRDM10	99	83.705	ENSCCAG00000024567	PRDM10	100	83.791	Cebus_capucinus
ENSGAGG00000012523	PRDM10	99	83.863	ENSCATG00000040031	PRDM10	100	84.034	Cercocebus_atys
ENSGAGG00000012523	PRDM10	99	81.378	ENSCLAG00000014605	PRDM10	99	83.117	Chinchilla_lanigera
ENSGAGG00000012523	PRDM10	99	83.777	ENSCSAG00000002202	PRDM10	100	83.948	Chlorocebus_sabaeus
ENSGAGG00000012523	PRDM10	100	97.525	ENSCPBG00000026880	PRDM10	100	97.525	Chrysemys_picta_bellii
ENSGAGG00000012523	PRDM10	99	83.962	ENSCANG00000032669	PRDM10	100	84.048	Colobus_angolensis_palliatus
ENSGAGG00000012523	PRDM10	99	81.772	ENSCGRG00001021647	Prdm10	97	83.333	Cricetulus_griseus_chok1gshd
ENSGAGG00000012523	PRDM10	99	81.772	ENSCGRG00000006562	Prdm10	97	83.333	Cricetulus_griseus_crigri
ENSGAGG00000012523	PRDM10	85	83.316	ENSDNOG00000001366	PRDM10	95	86.540	Dasypus_novemcinctus
ENSGAGG00000012523	PRDM10	99	82.474	ENSDORG00000014292	Prdm10	100	82.560	Dipodomys_ordii
ENSGAGG00000012523	PRDM10	99	83.505	ENSEASG00005022914	PRDM10	100	83.935	Equus_asinus_asinus
ENSGAGG00000012523	PRDM10	99	83.591	ENSECAG00000011499	PRDM10	100	83.849	Equus_caballus
ENSGAGG00000012523	PRDM10	97	84.326	ENSFCAG00000004111	PRDM10	96	84.501	Felis_catus
ENSGAGG00000012523	PRDM10	99	90.947	ENSFALG00000004873	PRDM10	100	90.444	Ficedula_albicollis
ENSGAGG00000012523	PRDM10	99	80.469	ENSFDAG00000017311	PRDM10	100	80.469	Fukomys_damarensis
ENSGAGG00000012523	PRDM10	100	92.467	ENSGALG00000033660	PRDM10	100	92.301	Gallus_gallus
ENSGAGG00000012523	PRDM10	91	72.840	ENSGACG00000012293	prdm10	98	72.840	Gasterosteus_aculeatus
ENSGAGG00000012523	PRDM10	99	83.904	ENSGGOG00000015359	PRDM10	100	83.990	Gorilla_gorilla
ENSGAGG00000012523	PRDM10	99	81.488	ENSHGLG00000001106	PRDM10	99	83.746	Heterocephalus_glaber_female
ENSGAGG00000012523	PRDM10	99	81.710	ENSHGLG00100002350	PRDM10	99	83.746	Heterocephalus_glaber_male
ENSGAGG00000012523	PRDM10	99	83.276	ENSSTOG00000002015	PRDM10	100	83.362	Ictidomys_tridecemlineatus
ENSGAGG00000012523	PRDM10	99	75.128	ENSJJAG00000021493	Prdm10	100	74.359	Jaculus_jaculus
ENSGAGG00000012523	PRDM10	99	80.855	ENSLAFG00000031867	PRDM10	100	80.855	Loxodonta_africana
ENSGAGG00000012523	PRDM10	99	84.034	ENSMFAG00000031008	PRDM10	100	84.206	Macaca_fascicularis
ENSGAGG00000012523	PRDM10	99	84.034	ENSMMUG00000017555	PRDM10	100	84.206	Macaca_mulatta
ENSGAGG00000012523	PRDM10	99	84.120	ENSMNEG00000036493	PRDM10	100	84.292	Macaca_nemestrina
ENSGAGG00000012523	PRDM10	93	83.922	ENSMLEG00000042028	PRDM10	100	81.961	Mandrillus_leucophaeus
ENSGAGG00000012523	PRDM10	99	92.030	ENSMGAG00000001112	PRDM10	100	91.862	Meleagris_gallopavo
ENSGAGG00000012523	PRDM10	99	84.206	ENSMICG00000013888	PRDM10	100	84.378	Microcebus_murinus
ENSGAGG00000012523	PRDM10	99	80.185	ENSMOCG00000021853	Prdm10	100	83.333	Microtus_ochrogaster
ENSGAGG00000012523	PRDM10	75	88.448	ENSMODG00000004979	PRDM10	99	87.995	Monodelphis_domestica
ENSGAGG00000012523	PRDM10	99	80.940	ENSMUSG00000042496	Prdm10	100	80.940	Mus_musculus
ENSGAGG00000012523	PRDM10	99	82.918	MGP_SPRETEiJ_G0033061	-	100	82.918	Mus_spretus
ENSGAGG00000012523	PRDM10	99	84.107	ENSMPUG00000008711	PRDM10	99	84.278	Mustela_putorius_furo
ENSGAGG00000012523	PRDM10	99	83.147	ENSMLUG00000013051	PRDM10	100	83.749	Myotis_lucifugus
ENSGAGG00000012523	PRDM10	99	83.061	ENSNGAG00000000580	Prdm10	100	83.061	Nannospalax_galili
ENSGAGG00000012523	PRDM10	99	84.206	ENSNLEG00000007488	PRDM10	100	84.378	Nomascus_leucogenys
ENSGAGG00000012523	PRDM10	99	79.949	ENSODEG00000005309	PRDM10	99	82.458	Octodon_degus
ENSGAGG00000012523	PRDM10	99	83.486	ENSOANG00000000577	-	100	80.307	Ornithorhynchus_anatinus
ENSGAGG00000012523	PRDM10	99	83.319	ENSOCUG00000003736	PRDM10	100	83.319	Oryctolagus_cuniculus
ENSGAGG00000012523	PRDM10	99	83.262	ENSOGAG00000010723	PRDM10	100	83.262	Otolemur_garnettii
ENSGAGG00000012523	PRDM10	99	82.975	ENSOARG00000014507	PRDM10	100	82.803	Ovis_aries
ENSGAGG00000012523	PRDM10	99	83.904	ENSPPAG00000042881	PRDM10	100	83.990	Pan_paniscus
ENSGAGG00000012523	PRDM10	99	84.278	ENSPPRG00000007002	PRDM10	100	84.450	Panthera_pardus
ENSGAGG00000012523	PRDM10	99	84.278	ENSPTIG00000013331	PRDM10	100	84.450	Panthera_tigris_altaica
ENSGAGG00000012523	PRDM10	99	83.990	ENSPTRG00000004477	PRDM10	100	84.075	Pan_troglodytes
ENSGAGG00000012523	PRDM10	99	84.206	ENSPANG00000017470	PRDM10	100	84.378	Papio_anubis
ENSGAGG00000012523	PRDM10	99	80.691	ENSPEMG00000014985	Prdm10	99	83.300	Peromyscus_maniculatus_bairdii
ENSGAGG00000012523	PRDM10	99	83.719	ENSPPYG00000004061	PRDM10	100	83.805	Pongo_abelii
ENSGAGG00000012523	PRDM10	91	75.791	ENSPCAG00000014514	PRDM10	99	75.791	Procavia_capensis
ENSGAGG00000012523	PRDM10	99	71.062	ENSPCOG00000023406	PRDM10	100	71.233	Propithecus_coquereli
ENSGAGG00000012523	PRDM10	99	84.107	ENSPVAG00000012764	PRDM10	100	84.107	Pteropus_vampyrus
ENSGAGG00000012523	PRDM10	99	82.833	ENSRNOG00000007853	Prdm10	100	82.833	Rattus_norvegicus
ENSGAGG00000012523	PRDM10	99	83.805	ENSRBIG00000030924	PRDM10	100	83.890	Rhinopithecus_bieti
ENSGAGG00000012523	PRDM10	99	83.805	ENSRROG00000034334	PRDM10	100	83.890	Rhinopithecus_roxellana
ENSGAGG00000012523	PRDM10	99	83.633	ENSSBOG00000008773	PRDM10	100	83.719	Saimiri_boliviensis_boliviensis
ENSGAGG00000012523	PRDM10	99	87.715	ENSSHAG00000004503	PRDM10	99	87.113	Sarcophilus_harrisii
ENSGAGG00000012523	PRDM10	67	98.077	ENSSARG00000013953	-	68	98.077	Sorex_araneus
ENSGAGG00000012523	PRDM10	99	87.596	ENSSPUG00000001178	PRDM10	98	92.135	Sphenodon_punctatus
ENSGAGG00000012523	PRDM10	99	82.962	ENSSSCG00000015243	PRDM10	99	85.643	Sus_scrofa
ENSGAGG00000012523	PRDM10	99	91.286	ENSTGUG00000000530	PRDM10	100	90.595	Taeniopygia_guttata
ENSGAGG00000012523	PRDM10	94	82.743	ENSTBEG00000007221	PRDM10	94	82.743	Tupaia_belangeri
ENSGAGG00000012523	PRDM10	99	81.998	ENSTTRG00000009189	PRDM10	100	81.568	Tursiops_truncatus
ENSGAGG00000012523	PRDM10	89	83.660	ENSUAMG00000018832	PRDM10	94	87.120	Ursus_americanus
ENSGAGG00000012523	PRDM10	99	81.919	ENSUMAG00000003167	PRDM10	99	84.760	Ursus_maritimus
ENSGAGG00000012523	PRDM10	99	83.333	ENSVVUG00000019878	PRDM10	100	83.505	Vulpes_vulpes
ENSGAGG00000012523	PRDM10	99	72.606	ENSXETG00000032173	PRDM10	100	72.356	Xenopus_tropicalis