EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000012538 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 15099 bases
Position: chrPPEB01014305.1:336-15434
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000017583	Symplekin_C	PF12295.8	1.5e-67	1	1
ENSGAGP00000017611	Symplekin_C	PF12295.8	1.6e-67	1	1
ENSGAGP00000017609	Symplekin_C	PF12295.8	1.3e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000020091	-	2199	-	ENSGAGP00000017609	732 (aa)	-	-
ENSGAGT00000020093	-	2703	-	ENSGAGP00000017611	900 (aa)	-	-
ENSGAGT00000020058	-	2739	-	ENSGAGP00000017583	912 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000012538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000012538's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000012538	-	88	84.885	ENSG00000125755	SYMPK	96	82.796	Homo_sapiens
ENSGAGG00000012538	-	88	74.281	ENSAPOG00000015934	sympk	63	73.117	Acanthochromis_polyacanthus
ENSGAGG00000012538	-	88	85.191	ENSAMEG00000000680	SYMPK	67	77.457	Ailuropoda_melanoleuca
ENSGAGG00000012538	-	88	73.374	ENSACIG00000006357	sympk	59	73.324	Amphilophus_citrinellus
ENSGAGG00000012538	-	88	74.085	ENSAOCG00000024124	sympk	65	69.509	Amphiprion_ocellaris
ENSGAGG00000012538	-	88	73.485	ENSAPEG00000003465	sympk	65	67.407	Amphiprion_percula
ENSGAGG00000012538	-	88	73.933	ENSATEG00000008472	sympk	57	73.894	Anabas_testudineus
ENSGAGG00000012538	-	88	85.474	ENSACAG00000004126	SYMPK	75	77.156	Anolis_carolinensis
ENSGAGG00000012538	-	88	85.191	ENSANAG00000021087	SYMPK	86	67.942	Aotus_nancymaae
ENSGAGG00000012538	-	88	73.788	ENSACLG00000001813	sympk	65	67.618	Astatotilapia_calliptera
ENSGAGG00000012538	-	87	71.624	ENSAMXG00000013677	sympk	57	72.468	Astyanax_mexicanus
ENSGAGG00000012538	-	88	84.885	ENSBTAG00000012101	SYMPK	67	77.153	Bos_taurus
ENSGAGG00000012538	-	88	85.191	ENSCJAG00000012172	SYMPK	71	83.604	Callithrix_jacchus
ENSGAGG00000012538	-	88	85.191	ENSCAFG00000004376	SYMPK	68	76.343	Canis_familiaris
ENSGAGG00000012538	-	88	85.191	ENSCAFG00020001815	SYMPK	68	76.343	Canis_lupus_dingo
ENSGAGG00000012538	-	88	85.038	ENSCHIG00000026784	SYMPK	67	77.179	Capra_hircus
ENSGAGG00000012538	-	88	84.885	ENSTSYG00000006268	SYMPK	72	83.243	Carlito_syrichta
ENSGAGG00000012538	-	88	80.243	ENSCAPG00000005112	SYMPK	58	80.335	Cavia_aperea
ENSGAGG00000012538	-	88	84.427	ENSCPOG00000010434	SYMPK	59	82.075	Cavia_porcellus
ENSGAGG00000012538	-	88	85.191	ENSCCAG00000036309	SYMPK	90	65.000	Cebus_capucinus
ENSGAGG00000012538	-	88	85.038	ENSCATG00000045107	SYMPK	90	65.180	Cercocebus_atys
ENSGAGG00000012538	-	88	84.580	ENSCLAG00000001206	SYMPK	67	78.023	Chinchilla_lanigera
ENSGAGG00000012538	-	88	85.038	ENSCSAG00000003115	SYMPK	68	76.632	Chlorocebus_sabaeus
ENSGAGG00000012538	-	93	93.111	ENSCPBG00000007170	SYMPK	68	93.111	Chrysemys_picta_bellii
ENSGAGG00000012538	-	87	47.489	ENSCING00000021232	-	64	46.983	Ciona_intestinalis
ENSGAGG00000012538	-	89	45.249	ENSCSAVG00000005154	-	64	45.573	Ciona_savignyi
ENSGAGG00000012538	-	90	83.780	ENSCANG00000040907	SYMPK	90	65.009	Colobus_angolensis_palliatus
ENSGAGG00000012538	-	81	83.967	ENSCGRG00001010086	Sympk	68	77.222	Cricetulus_griseus_chok1gshd
ENSGAGG00000012538	-	88	73.534	ENSCSEG00000016802	sympk	65	66.544	Cynoglossus_semilaevis
ENSGAGG00000012538	-	88	71.125	ENSDARG00000059553	sympk	56	71.162	Danio_rerio
ENSGAGG00000012538	-	88	84.885	ENSDNOG00000016149	SYMPK	64	79.352	Dasypus_novemcinctus
ENSGAGG00000012538	-	87	36.161	FBgn0037371	Sym	59	35.931	Drosophila_melanogaster
ENSGAGG00000012538	-	87	61.527	ENSEBUG00000000387	sympk	73	61.245	Eptatretus_burgeri
ENSGAGG00000012538	-	88	85.191	ENSEASG00005014227	SYMPK	65	79.714	Equus_asinus_asinus
ENSGAGG00000012538	-	88	85.191	ENSECAG00000008163	SYMPK	65	79.714	Equus_caballus
ENSGAGG00000012538	-	88	72.466	ENSELUG00000000850	sympk	55	72.714	Esox_lucius
ENSGAGG00000012538	-	91	85.429	ENSFCAG00000007337	SYMPK	62	85.429	Felis_catus
ENSGAGG00000012538	-	88	84.733	ENSFDAG00000011272	SYMPK	67	78.347	Fukomys_damarensis
ENSGAGG00000012538	-	88	72.989	ENSFHEG00000010274	sympk	66	65.887	Fundulus_heteroclitus
ENSGAGG00000012538	-	88	71.277	ENSGMOG00000002357	sympk	63	71.102	Gadus_morhua
ENSGAGG00000012538	-	86	73.684	ENSGAFG00000010976	sympk	65	67.459	Gambusia_affinis
ENSGAGG00000012538	-	88	71.908	ENSGACG00000002735	sympk	62	71.469	Gasterosteus_aculeatus
ENSGAGG00000012538	-	90	83.507	ENSGGOG00000003410	SYMPK	90	65.352	Gorilla_gorilla
ENSGAGG00000012538	-	88	73.083	ENSHBUG00000023564	sympk	65	67.078	Haplochromis_burtoni
ENSGAGG00000012538	-	88	76.641	ENSHGLG00000005228	SYMPK	64	72.976	Heterocephalus_glaber_female
ENSGAGG00000012538	-	88	85.038	ENSHGLG00100018571	SYMPK	64	77.723	Heterocephalus_glaber_male
ENSGAGG00000012538	-	88	69.785	ENSHCOG00000017400	sympk	58	70.520	Hippocampus_comes
ENSGAGG00000012538	-	88	72.163	ENSIPUG00000024020	SYMPK	56	73.247	Ictalurus_punctatus
ENSGAGG00000012538	-	88	85.344	ENSSTOG00000001534	SYMPK	64	80.266	Ictidomys_tridecemlineatus
ENSGAGG00000012538	-	88	85.496	ENSJJAG00000006633	Sympk	68	76.941	Jaculus_jaculus
ENSGAGG00000012538	-	88	72.989	ENSKMAG00000016292	sympk	65	67.677	Kryptolebias_marmoratus
ENSGAGG00000012538	-	88	73.788	ENSLBEG00000027913	sympk	66	67.445	Labrus_bergylta
ENSGAGG00000012538	-	88	68.862	ENSLACG00000016497	SYMPK	65	67.257	Latimeria_chalumnae
ENSGAGG00000012538	-	88	85.038	ENSLAFG00000008726	SYMPK	91	69.818	Loxodonta_africana
ENSGAGG00000012538	-	50	75.472	ENSMFAG00000030093	-	90	71.569	Macaca_fascicularis
ENSGAGG00000012538	-	88	85.038	ENSMMUG00000015428	SYMPK	90	65.180	Macaca_mulatta
ENSGAGG00000012538	-	88	85.038	ENSMNEG00000019439	SYMPK	73	83.423	Macaca_nemestrina
ENSGAGG00000012538	-	88	85.038	ENSMLEG00000040508	SYMPK	90	65.180	Mandrillus_leucophaeus
ENSGAGG00000012538	-	88	73.071	ENSMAMG00000010486	sympk	66	66.584	Mastacembelus_armatus
ENSGAGG00000012538	-	88	73.788	ENSMZEG00005014146	sympk	65	67.618	Maylandia_zebra
ENSGAGG00000012538	-	88	84.580	ENSMAUG00000015657	Sympk	66	77.160	Mesocricetus_auratus
ENSGAGG00000012538	-	88	84.885	ENSMICG00000001871	SYMPK	90	65.753	Microcebus_murinus
ENSGAGG00000012538	-	88	84.733	ENSMOCG00000008388	Sympk	66	78.143	Microtus_ochrogaster
ENSGAGG00000012538	-	88	70.000	ENSMMOG00000019227	sympk	59	70.143	Mola_mola
ENSGAGG00000012538	-	88	85.496	ENSMODG00000021534	SYMPK	63	82.222	Monodelphis_domestica
ENSGAGG00000012538	-	74	69.697	ENSMALG00000008347	sympk	57	69.697	Monopterus_albus
ENSGAGG00000012538	-	88	84.580	MGP_CAROLIEiJ_G0029267	Sympk	77	95.413	Mus_caroli
ENSGAGG00000012538	-	88	84.580	ENSMUSG00000023118	Sympk	76	95.413	Mus_musculus
ENSGAGG00000012538	-	88	84.580	MGP_PahariEiJ_G0021127	Sympk	77	95.413	Mus_pahari
ENSGAGG00000012538	-	88	84.580	MGP_SPRETEiJ_G0030351	-	77	95.413	Mus_spretus
ENSGAGG00000012538	-	88	82.595	ENSMPUG00000005505	SYMPK	67	74.743	Mustela_putorius_furo
ENSGAGG00000012538	-	88	81.374	ENSMLUG00000001359	SYMPK	81	77.240	Myotis_lucifugus
ENSGAGG00000012538	-	88	85.038	ENSNGAG00000000820	Sympk	64	79.831	Nannospalax_galili
ENSGAGG00000012538	-	88	73.233	ENSNBRG00000018101	sympk	60	73.191	Neolamprologus_brichardi
ENSGAGG00000012538	-	88	78.604	ENSNLEG00000002369	SYMPK	71	70.957	Nomascus_leucogenys
ENSGAGG00000012538	-	74	81.169	ENSMEUG00000003866	SYMPK	55	81.169	Notamacropus_eugenii
ENSGAGG00000012538	-	88	82.443	ENSOPRG00000009967	SYMPK	68	74.686	Ochotona_princeps
ENSGAGG00000012538	-	88	84.427	ENSODEG00000007519	SYMPK	67	77.442	Octodon_degus
ENSGAGG00000012538	-	88	72.864	ENSONIG00000016802	sympk	65	70.173	Oreochromis_niloticus
ENSGAGG00000012538	-	74	83.063	ENSOCUG00000005511	SYMPK	52	83.063	Oryctolagus_cuniculus
ENSGAGG00000012538	-	88	73.485	ENSORLG00000015338	sympk	60	73.752	Oryzias_latipes
ENSGAGG00000012538	-	88	73.676	ENSORLG00020004402	sympk	58	73.752	Oryzias_latipes_hni
ENSGAGG00000012538	-	88	73.676	ENSORLG00015005712	sympk	58	73.752	Oryzias_latipes_hsok
ENSGAGG00000012538	-	88	73.636	ENSOMEG00000022561	sympk	58	73.714	Oryzias_melastigma
ENSGAGG00000012538	-	88	84.885	ENSOGAG00000013483	SYMPK	68	76.861	Otolemur_garnettii
ENSGAGG00000012538	-	88	84.569	ENSOARG00000010349	SYMPK	67	75.573	Ovis_aries
ENSGAGG00000012538	-	88	84.885	ENSPPAG00000043204	SYMPK	90	65.352	Pan_paniscus
ENSGAGG00000012538	-	88	85.191	ENSPPRG00000004282	SYMPK	64	79.712	Panthera_pardus
ENSGAGG00000012538	-	88	85.191	ENSPTIG00000015420	SYMPK	58	85.429	Panthera_tigris_altaica
ENSGAGG00000012538	-	88	84.885	ENSPTRG00000011169	SYMPK	90	65.352	Pan_troglodytes
ENSGAGG00000012538	-	88	85.038	ENSPANG00000019930	SYMPK	90	65.009	Papio_anubis
ENSGAGG00000012538	-	88	74.135	ENSPKIG00000017132	sympk	57	74.929	Paramormyrops_kingsleyae
ENSGAGG00000012538	-	88	84.427	ENSPEMG00000007564	Sympk	66	77.882	Peromyscus_maniculatus_bairdii
ENSGAGG00000012538	-	89	61.201	ENSPMAG00000004936	sympk	69	62.064	Petromyzon_marinus
ENSGAGG00000012538	-	88	85.191	ENSPCIG00000024476	SYMPK	68	78.738	Phascolarctos_cinereus
ENSGAGG00000012538	-	88	73.293	ENSPFOG00000001194	sympk	65	67.669	Poecilia_formosa
ENSGAGG00000012538	-	88	73.293	ENSPLAG00000012995	sympk	65	67.669	Poecilia_latipinna
ENSGAGG00000012538	-	88	73.141	ENSPMEG00000008099	sympk	65	67.419	Poecilia_mexicana
ENSGAGG00000012538	-	88	73.141	ENSPREG00000006176	sympk	69	66.832	Poecilia_reticulata
ENSGAGG00000012538	-	88	84.733	ENSPPYG00000010135	SYMPK	62	85.036	Pongo_abelii
ENSGAGG00000012538	-	84	79.651	ENSPCAG00000005182	SYMPK	61	79.651	Procavia_capensis
ENSGAGG00000012538	-	88	85.191	ENSPCOG00000023740	SYMPK	74	83.604	Propithecus_coquereli
ENSGAGG00000012538	-	88	84.580	ENSPVAG00000001355	SYMPK	67	79.252	Pteropus_vampyrus
ENSGAGG00000012538	-	88	72.782	ENSPNYG00000011455	sympk	66	65.455	Pundamilia_nyererei
ENSGAGG00000012538	-	88	71.601	ENSPNAG00000016505	sympk	57	71.049	Pygocentrus_nattereri
ENSGAGG00000012538	-	88	84.733	ENSRNOG00000014353	Sympk	64	79.928	Rattus_norvegicus
ENSGAGG00000012538	-	88	85.038	ENSRBIG00000040963	SYMPK	89	66.492	Rhinopithecus_bieti
ENSGAGG00000012538	-	88	85.038	ENSRROG00000024834	SYMPK	90	62.392	Rhinopithecus_roxellana
ENSGAGG00000012538	-	88	85.038	ENSSBOG00000034497	SYMPK	73	83.423	Saimiri_boliviensis_boliviensis
ENSGAGG00000012538	-	88	83.409	ENSSHAG00000003139	SYMPK	64	82.927	Sarcophilus_harrisii
ENSGAGG00000012538	-	88	74.135	ENSSFOG00015006974	sympk	63	68.640	Scleropages_formosus
ENSGAGG00000012538	-	88	73.979	ENSSMAG00000018130	sympk	53	67.037	Scophthalmus_maximus
ENSGAGG00000012538	-	88	73.788	ENSSDUG00000007092	sympk	65	67.327	Seriola_dumerili
ENSGAGG00000012538	-	88	73.788	ENSSLDG00000014774	sympk	65	67.327	Seriola_lalandi_dorsalis
ENSGAGG00000012538	-	91	85.359	ENSSPUG00000002789	SYMPK	67	83.105	Sphenodon_punctatus
ENSGAGG00000012538	-	88	73.788	ENSSPAG00000000854	sympk	66	66.994	Stegastes_partitus
ENSGAGG00000012538	-	88	85.038	ENSSSCG00000003093	SYMPK	67	77.700	Sus_scrofa
ENSGAGG00000012538	-	88	72.838	ENSTRUG00000010202	sympk	67	65.153	Takifugu_rubripes
ENSGAGG00000012538	-	88	73.333	ENSTNIG00000017855	sympk	62	73.171	Tetraodon_nigroviridis
ENSGAGG00000012538	-	78	91.558	ENSTBEG00000000454	SYMPK	55	91.558	Tupaia_belangeri
ENSGAGG00000012538	-	93	64.189	ENSTTRG00000014311	SYMPK	68	64.149	Tursiops_truncatus
ENSGAGG00000012538	-	88	81.221	ENSUAMG00000022272	SYMPK	65	76.775	Ursus_americanus
ENSGAGG00000012538	-	88	85.191	ENSUMAG00000023698	SYMPK	64	80.072	Ursus_maritimus
ENSGAGG00000012538	-	88	85.191	ENSVVUG00000003024	SYMPK	61	85.429	Vulpes_vulpes
ENSGAGG00000012538	-	86	73.913	ENSXETG00000024453	sympk	61	71.467	Xenopus_tropicalis
ENSGAGG00000012538	-	86	73.148	ENSXCOG00000015368	sympk	65	72.896	Xiphophorus_couchianus
ENSGAGG00000012538	-	86	73.994	ENSXMAG00000005737	sympk	65	68.045	Xiphophorus_maculatus