EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000012557 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 40263 bases
Position: chrPPEB01005734.1:8263-48525
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000016805	MMR_HSR1	PF01926.23	3.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000019184	-	2490	-	ENSGAGP00000016805	218 (aa)	-	-
ENSGAGT00000019185	-	628	-	ENSGAGP00000016806	208 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000012557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000012557's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000012557	-	76	47.273	ENSGAGG00000000742	-	82	47.273
ENSGAGG00000012557	-	93	34.450	ENSGAGG00000025340	RAB36	78	34.450
ENSGAGG00000012557	-	74	35.152	ENSGAGG00000021838	RERG	81	35.152
ENSGAGG00000012557	-	72	43.949	ENSGAGG00000018569	RAB22A	81	43.949
ENSGAGG00000012557	-	82	31.285	ENSGAGG00000025053	RRAS2	88	31.285
ENSGAGG00000012557	-	72	40.491	ENSGAGG00000012234	RAB7A	78	40.491
ENSGAGG00000012557	-	55	30.894	ENSGAGG00000019544	ARL4A	60	30.894
ENSGAGG00000012557	-	76	53.614	ENSGAGG00000023956	RAB1B	83	53.614
ENSGAGG00000012557	-	80	51.149	ENSGAGG00000006802	RAB1A	85	51.149
ENSGAGG00000012557	-	77	41.040	ENSGAGG00000012314	RAB9B	86	41.040
ENSGAGG00000012557	-	72	37.580	ENSGAGG00000021701	RAB6A	75	37.580
ENSGAGG00000012557	-	94	36.842	ENSGAGG00000004921	RAB42	99	37.198
ENSGAGG00000012557	-	96	40.000	ENSGAGG00000004474	RAB30	97	40.000
ENSGAGG00000012557	-	83	32.418	ENSGAGG00000011057	KRAS	98	33.505
ENSGAGG00000012557	-	76	48.193	ENSGAGG00000017207	RAB35	99	41.627
ENSGAGG00000012557	-	80	39.106	ENSGAGG00000017981	RAB9A	87	39.106
ENSGAGG00000012557	-	92	40.796	ENSGAGG00000013139	RAB19	89	40.796
ENSGAGG00000012557	-	78	34.503	ENSGAGG00000019886	-	94	35.519
ENSGAGG00000012557	-	78	56.140	ENSGAGG00000023041	RAB2B	80	56.140
ENSGAGG00000012557	-	70	35.256	ENSGAGG00000012473	RAB34	67	35.256
ENSGAGG00000012557	-	94	43.204	ENSGAGG00000005319	RAB5A	91	43.204
ENSGAGG00000012557	-	76	42.515	ENSGAGG00000007278	RAB12	84	37.736
ENSGAGG00000012557	-	80	52.299	ENSGAGG00000004988	RAB14	81	52.299
ENSGAGG00000012557	-	53	31.624	ENSGAGG00000014586	ARL14	56	31.624
ENSGAGG00000012557	-	79	46.857	ENSGAGG00000008447	RAB39B	82	46.857
ENSGAGG00000012557	-	74	48.148	ENSGAGG00000015642	-	78	48.148
ENSGAGG00000012557	-	70	35.484	ENSGAGG00000017673	NRAS	87	36.527
ENSGAGG00000012557	-	80	40.223	ENSGAGG00000009488	RAB33A	78	40.223
ENSGAGG00000012557	-	54	34.167	ENSGAGG00000020394	RAB7B	76	34.167
ENSGAGG00000012557	-	89	31.500	ENSGAGG00000022371	-	92	31.500
ENSGAGG00000012557	-	100	90.826	ENSGAGG00000014814	RAB11A	100	90.826
ENSGAGG00000012557	-	73	35.000	ENSGAGG00000012709	RAB23	75	34.637
ENSGAGG00000012557	-	78	39.205	ENSGAGG00000002936	RAB33B	76	39.205
ENSGAGG00000012557	-	78	54.386	ENSGAGG00000005606	RAB2A	81	54.386
ENSGAGG00000012557	-	75	30.814	ENSGAGG00000015067	RASL11A	72	30.814
ENSGAGG00000012557	-	100	62.273	ENSGAGG00000020703	RAB25	100	62.273
ENSGAGG00000012557	-	100	78.899	ENSGAGG00000020702	-	100	78.899
ENSGAGG00000012557	-	92	36.232	ENSGAGG00000004918	-	99	36.232
ENSGAGG00000012557	-	53	30.769	ENSGAGG00000024318	ARL4D	58	30.769
ENSGAGG00000012557	-	72	32.911	ENSGAGG00000020094	MRAS	82	35.227
ENSGAGG00000012557	-	68	36.667	ENSGAGG00000011790	-	86	37.654

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000012557	-	100	99.083	ENSG00000185236	RAB11B	100	100.000	Homo_sapiens
ENSGAGG00000012557	-	99	97.717	ENSAMEG00000004955	RAB11B	99	97.717	Ailuropoda_melanoleuca
ENSGAGG00000012557	-	86	90.374	ENSACIG00000024374	rab11ba	77	90.374	Amphilophus_citrinellus
ENSGAGG00000012557	-	100	95.413	ENSAOCG00000018050	rab11ba	100	95.413	Amphiprion_ocellaris
ENSGAGG00000012557	-	100	94.954	ENSAPEG00000009177	rab11ba	100	94.954	Amphiprion_percula
ENSGAGG00000012557	-	100	96.330	ENSATEG00000023730	rab11ba	100	96.330	Anabas_testudineus
ENSGAGG00000012557	-	100	99.083	ENSANAG00000037616	RAB11B	100	99.083	Aotus_nancymaae
ENSGAGG00000012557	-	93	88.670	ENSACLG00000018852	-	92	88.670	Astatotilapia_calliptera
ENSGAGG00000012557	-	100	94.037	ENSACLG00000005420	rab11ba	100	94.037	Astatotilapia_calliptera
ENSGAGG00000012557	-	99	80.556	WBGene00004274	rab-11.1	99	80.556	Caenorhabditis_elegans
ENSGAGG00000012557	-	100	99.083	ENSCJAG00000010778	RAB11B	100	99.083	Callithrix_jacchus
ENSGAGG00000012557	-	100	99.083	ENSCAFG00000032060	RAB11B	100	99.083	Canis_familiaris
ENSGAGG00000012557	-	100	99.083	ENSCAFG00020022184	RAB11B	100	99.083	Canis_lupus_dingo
ENSGAGG00000012557	-	100	99.083	ENSTSYG00000014758	RAB11B	100	99.083	Carlito_syrichta
ENSGAGG00000012557	-	100	98.624	ENSCPOG00000030154	RAB11B	100	98.624	Cavia_porcellus
ENSGAGG00000012557	-	100	99.083	ENSCCAG00000031042	RAB11B	100	99.083	Cebus_capucinus
ENSGAGG00000012557	-	100	99.083	ENSCLAG00000003207	RAB11B	100	99.083	Chinchilla_lanigera
ENSGAGG00000012557	-	100	99.083	ENSCSAG00000008024	RAB11B	100	99.083	Chlorocebus_sabaeus
ENSGAGG00000012557	-	100	84.862	ENSCHOG00000013525	RAB11B	100	84.862	Choloepus_hoffmanni
ENSGAGG00000012557	-	100	84.932	ENSCING00000009526	-	100	84.932	Ciona_intestinalis
ENSGAGG00000012557	-	100	99.083	ENSCANG00000040517	RAB11B	100	99.083	Colobus_angolensis_palliatus
ENSGAGG00000012557	-	100	99.083	ENSCGRG00001013827	Rab11b	100	99.083	Cricetulus_griseus_chok1gshd
ENSGAGG00000012557	-	100	99.083	ENSCGRG00000010967	Rab11b	100	99.083	Cricetulus_griseus_crigri
ENSGAGG00000012557	-	100	95.413	ENSCSEG00000007121	rab11ba	84	95.413	Cynoglossus_semilaevis
ENSGAGG00000012557	-	100	96.789	ENSDARG00000041878	rab11ba	100	96.789	Danio_rerio
ENSGAGG00000012557	-	100	97.248	ENSDNOG00000004134	-	100	97.248	Dasypus_novemcinctus
ENSGAGG00000012557	-	100	99.083	ENSDNOG00000014618	RAB11B	97	99.083	Dasypus_novemcinctus
ENSGAGG00000012557	-	100	98.165	ENSDORG00000006304	Rab11b	100	98.165	Dipodomys_ordii
ENSGAGG00000012557	-	100	81.193	ENSEBUG00000015447	-	100	81.193	Eptatretus_burgeri
ENSGAGG00000012557	-	100	93.119	ENSEBUG00000011775	rab11ba	99	93.171	Eptatretus_burgeri
ENSGAGG00000012557	-	66	99.301	ENSEEUG00000009165	-	100	99.301	Erinaceus_europaeus
ENSGAGG00000012557	-	89	92.268	ENSELUG00000019240	-	99	92.268	Esox_lucius
ENSGAGG00000012557	-	100	98.624	ENSFCAG00000015216	RAB11B	100	98.624	Felis_catus
ENSGAGG00000012557	-	100	98.624	ENSFDAG00000019872	RAB11B	100	98.624	Fukomys_damarensis
ENSGAGG00000012557	-	100	94.954	ENSFHEG00000022642	rab11ba	100	94.954	Fundulus_heteroclitus
ENSGAGG00000012557	-	100	93.578	ENSGMOG00000007390	rab11ba	99	93.578	Gadus_morhua
ENSGAGG00000012557	-	100	95.413	ENSGAFG00000005679	rab11ba	100	95.413	Gambusia_affinis
ENSGAGG00000012557	-	100	99.083	ENSHGLG00000014984	RAB11B	100	99.083	Heterocephalus_glaber_female
ENSGAGG00000012557	-	100	98.624	ENSHGLG00100003638	RAB11B	100	98.624	Heterocephalus_glaber_male
ENSGAGG00000012557	-	100	99.083	ENSSTOG00000031571	RAB11B	100	99.083	Ictidomys_tridecemlineatus
ENSGAGG00000012557	-	100	99.083	ENSJJAG00000018891	Rab11b	100	99.083	Jaculus_jaculus
ENSGAGG00000012557	-	100	95.872	ENSKMAG00000006082	-	100	95.872	Kryptolebias_marmoratus
ENSGAGG00000012557	-	100	95.872	ENSLBEG00000006087	rab11ba	100	95.872	Labrus_bergylta
ENSGAGG00000012557	-	78	100.000	ENSLACG00000016974	RAB11B	99	100.000	Latimeria_chalumnae
ENSGAGG00000012557	-	100	99.083	ENSLAFG00000013598	RAB11B	100	99.083	Loxodonta_africana
ENSGAGG00000012557	-	100	99.083	ENSMNEG00000039759	-	100	99.083	Macaca_nemestrina
ENSGAGG00000012557	-	100	95.413	ENSMAMG00000018556	rab11ba	100	95.413	Mastacembelus_armatus
ENSGAGG00000012557	-	93	88.670	ENSMZEG00005019251	-	92	88.670	Maylandia_zebra
ENSGAGG00000012557	-	100	94.037	ENSMZEG00005010947	rab11ba	100	94.037	Maylandia_zebra
ENSGAGG00000012557	-	100	98.624	ENSMAUG00000021579	Rab11b	100	98.624	Mesocricetus_auratus
ENSGAGG00000012557	-	100	98.624	ENSMOCG00000012667	Rab11b	100	98.624	Microtus_ochrogaster
ENSGAGG00000012557	-	100	92.202	ENSMALG00000021949	rab11ba	100	92.202	Monopterus_albus
ENSGAGG00000012557	-	100	99.083	MGP_CAROLIEiJ_G0021415	Rab11b	100	99.083	Mus_caroli
ENSGAGG00000012557	-	100	98.165	ENSMUSG00000077450	Rab11b	100	98.165	Mus_musculus
ENSGAGG00000012557	-	100	99.083	MGP_PahariEiJ_G0020420	Rab11b	100	99.083	Mus_pahari
ENSGAGG00000012557	-	100	99.083	MGP_SPRETEiJ_G0022327	Rab11b	100	99.083	Mus_spretus
ENSGAGG00000012557	-	100	98.624	ENSMPUG00000007263	RAB11B	100	98.624	Mustela_putorius_furo
ENSGAGG00000012557	-	100	94.570	ENSMLUG00000002308	-	100	94.570	Myotis_lucifugus
ENSGAGG00000012557	-	100	99.083	ENSNGAG00000015757	Rab11b	100	99.083	Nannospalax_galili
ENSGAGG00000012557	-	100	94.495	ENSNBRG00000023898	rab11ba	84	94.495	Neolamprologus_brichardi
ENSGAGG00000012557	-	100	99.083	ENSNLEG00000001733	RAB11B	100	99.083	Nomascus_leucogenys
ENSGAGG00000012557	-	100	99.083	ENSODEG00000011371	RAB11B	100	99.083	Octodon_degus
ENSGAGG00000012557	-	100	94.954	ENSONIG00000002535	rab11ba	100	94.954	Oreochromis_niloticus
ENSGAGG00000012557	-	74	97.516	ENSOCUG00000028208	RAB11B	64	97.516	Oryctolagus_cuniculus
ENSGAGG00000012557	-	99	95.853	ENSORLG00000015307	rab11ba	99	95.853	Oryzias_latipes
ENSGAGG00000012557	-	99	95.853	ENSORLG00020020816	rab11ba	99	95.853	Oryzias_latipes_hni
ENSGAGG00000012557	-	99	96.296	ENSORLG00015016946	rab11ba	81	96.296	Oryzias_latipes_hsok
ENSGAGG00000012557	-	99	95.853	ENSOMEG00000002581	rab11ba	99	95.853	Oryzias_melastigma
ENSGAGG00000012557	-	100	99.083	ENSOGAG00000003227	RAB11B	99	99.083	Otolemur_garnettii
ENSGAGG00000012557	-	100	99.083	ENSOARG00000003801	RAB11B	97	99.083	Ovis_aries
ENSGAGG00000012557	-	83	95.000	ENSPPRG00000010160	RAB11B	88	95.000	Panthera_pardus
ENSGAGG00000012557	-	100	99.083	ENSPEMG00000014536	Rab11b	100	99.083	Peromyscus_maniculatus_bairdii
ENSGAGG00000012557	-	94	80.476	ENSPMAG00000009335	-	100	80.476	Petromyzon_marinus
ENSGAGG00000012557	-	100	95.872	ENSPFOG00000006159	rab11ba	100	95.872	Poecilia_formosa
ENSGAGG00000012557	-	100	95.872	ENSPLAG00000014243	rab11ba	100	95.872	Poecilia_latipinna
ENSGAGG00000012557	-	100	95.872	ENSPMEG00000007917	rab11ba	75	95.872	Poecilia_mexicana
ENSGAGG00000012557	-	100	95.872	ENSPREG00000006357	rab11ba	78	95.872	Poecilia_reticulata
ENSGAGG00000012557	-	100	99.083	ENSPPYG00000009504	RAB11B	100	99.083	Pongo_abelii
ENSGAGG00000012557	-	100	90.367	ENSPCAG00000016118	RAB11B	100	90.367	Procavia_capensis
ENSGAGG00000012557	-	100	99.083	ENSPCOG00000028053	RAB11B	100	99.083	Propithecus_coquereli
ENSGAGG00000012557	-	67	97.260	ENSPCOG00000008655	-	100	97.260	Propithecus_coquereli
ENSGAGG00000012557	-	100	99.083	ENSPVAG00000009645	RAB11B	100	99.083	Pteropus_vampyrus
ENSGAGG00000012557	-	93	79.512	ENSPNYG00000023810	-	90	79.512	Pundamilia_nyererei
ENSGAGG00000012557	-	100	94.037	ENSPNYG00000019644	rab11ba	100	94.037	Pundamilia_nyererei
ENSGAGG00000012557	-	100	98.624	ENSPNAG00000006431	-	100	98.624	Pygocentrus_nattereri
ENSGAGG00000012557	-	100	98.165	ENSPNAG00000020475	rab11ba	100	98.165	Pygocentrus_nattereri
ENSGAGG00000012557	-	100	99.083	ENSRNOG00000007648	Rab11b	100	99.083	Rattus_norvegicus
ENSGAGG00000012557	-	100	99.083	ENSSBOG00000035094	RAB11B	100	99.083	Saimiri_boliviensis_boliviensis
ENSGAGG00000012557	-	100	95.872	ENSSDUG00000002965	rab11ba	100	95.872	Seriola_dumerili
ENSGAGG00000012557	-	100	95.872	ENSSLDG00000005221	rab11ba	100	95.872	Seriola_lalandi_dorsalis
ENSGAGG00000012557	-	100	94.954	ENSSPAG00000017313	rab11ba	100	94.954	Stegastes_partitus
ENSGAGG00000012557	-	100	99.083	ENSSSCG00000013600	RAB11B	100	99.083	Sus_scrofa
ENSGAGG00000012557	-	59	99.225	ENSTBEG00000014750	-	100	99.225	Tupaia_belangeri
ENSGAGG00000012557	-	100	99.083	ENSTTRG00000009758	RAB11B	100	99.083	Tursiops_truncatus
ENSGAGG00000012557	-	94	79.512	ENSUMAG00000014594	RAB11B	97	79.512	Ursus_maritimus
ENSGAGG00000012557	-	100	99.083	ENSVVUG00000025210	RAB11B	100	99.083	Vulpes_vulpes
ENSGAGG00000012557	-	100	95.413	ENSXETG00000021890	rab11b.2	99	95.413	Xenopus_tropicalis
ENSGAGG00000012557	-	61	98.496	ENSXCOG00000009194	-	98	98.496	Xiphophorus_couchianus
ENSGAGG00000012557	-	100	95.413	ENSXMAG00000013416	rab11ba	100	95.413	Xiphophorus_maculatus