EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSGAGG00000012677 (Gene tree)
Gene ID
-
Gene Symbol
CNOT3
Alias
KIAA0691|LENG2|NOT3|NOT3H
Full Name
CCR4-NOT transcription complex subunit 3
Gene Type
protein_coding
Species
Gopherus_agassizii
Status
putative
Strand
Minus strand
Length
15373 bases
Position
chrPPEB01012972.1:7580-22952
Accession
7879
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAGP00000017428Not3PF04065.152.4e-9311
ENSGAGP00000017258Not3PF04065.157.9e-4911
ENSGAGP00000017258NOT2_3_5PF04153.188.6e-4111
ENSGAGP00000017428NOT2_3_5PF04153.188.7e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAGT00000019686CNOT3-2012684-ENSGAGP00000017258626 (aa)--
ENSGAGT00000019879CNOT3-2022130-ENSGAGP00000017428709 (aa)--
Gene Model
Click here to download ENSGAGG00000012677's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000012677's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAGG00000012677CNOT310078.711ENSG00000088038CNOT39996.923Homo_sapiens
ENSGAGG00000012677CNOT36280.000ENSAPOG00000015499CNOT39180.000Acanthochromis_polyacanthus
ENSGAGG00000012677CNOT310079.217ENSAMEG00000004528CNOT39979.250Ailuropoda_melanoleuca
ENSGAGG00000012677CNOT38088.980ENSACIG00000006635cnot3a9962.222Amphilophus_citrinellus
ENSGAGG00000012677CNOT36290.135ENSACIG00000003652cnot3b7590.135Amphilophus_citrinellus
ENSGAGG00000012677CNOT39374.368ENSAOCG00000018385-10059.424Amphiprion_ocellaris
ENSGAGG00000012677CNOT39588.235ENSAOCG00000023769cnot3a6988.235Amphiprion_ocellaris
ENSGAGG00000012677CNOT39688.235ENSAPEG00000006624cnot3a7088.235Amphiprion_percula
ENSGAGG00000012677CNOT39486.691ENSAPEG00000002640cnot3b8188.889Amphiprion_percula
ENSGAGG00000012677CNOT38787.097ENSATEG00000022737cnot3a8367.674Anabas_testudineus
ENSGAGG00000012677CNOT39790.826ENSATEG00000015777cnot3b6590.106Anabas_testudineus
ENSGAGG00000012677CNOT310089.065ENSACAG00000016085CNOT39986.509Anolis_carolinensis
ENSGAGG00000012677CNOT310080.155ENSANAG00000025756CNOT39979.808Aotus_nancymaae
ENSGAGG00000012677CNOT38787.558ENSACLG00000021136cnot3a6588.235Astatotilapia_calliptera
ENSGAGG00000012677CNOT38792.202ENSACLG00000016702cnot3b8069.444Astatotilapia_calliptera
ENSGAGG00000012677CNOT38889.908ENSAMXG00000009447cnot3b9961.517Astyanax_mexicanus
ENSGAGG00000012677CNOT38586.697ENSAMXG00000012359cnot3a6687.938Astyanax_mexicanus
ENSGAGG00000012677CNOT310080.395ENSBTAG00000014900CNOT39979.973Bos_taurus
ENSGAGG00000012677CNOT310079.192ENSCJAG00000001094CNOT39978.961Callithrix_jacchus
ENSGAGG00000012677CNOT310079.010ENSCAFG00000002699CNOT39978.533Canis_familiaris
ENSGAGG00000012677CNOT310079.010ENSCAFG00020018359CNOT39978.533Canis_lupus_dingo
ENSGAGG00000012677CNOT310081.298ENSCHIG00000015302CNOT39980.801Capra_hircus
ENSGAGG00000012677CNOT310079.728ENSTSYG00000008058CNOT39979.380Carlito_syrichta
ENSGAGG00000012677CNOT310076.844ENSCAPG00000009533CNOT39977.556Cavia_aperea
ENSGAGG00000012677CNOT310078.024ENSCPOG00000020741CNOT39978.220Cavia_porcellus
ENSGAGG00000012677CNOT310079.560ENSCCAG00000036290CNOT39979.666Cebus_capucinus
ENSGAGG00000012677CNOT310079.248ENSCATG00000030324CNOT39979.011Cercocebus_atys
ENSGAGG00000012677CNOT310080.518ENSCLAG00000003302CNOT310086.585Chinchilla_lanigera
ENSGAGG00000012677CNOT310079.098ENSCSAG00000001900CNOT39978.877Chlorocebus_sabaeus
ENSGAGG00000012677CNOT310098.410ENSCPBG00000011655CNOT39994.840Chrysemys_picta_bellii
ENSGAGG00000012677CNOT39951.275ENSCING00000000293-9950.674Ciona_intestinalis
ENSGAGG00000012677CNOT310079.248ENSCANG00000013408CNOT39979.011Colobus_angolensis_palliatus
ENSGAGG00000012677CNOT310078.987ENSCGRG00001000855Cnot39978.249Cricetulus_griseus_chok1gshd
ENSGAGG00000012677CNOT36273.148ENSCGRG00000012929Cnot37571.759Cricetulus_griseus_crigri
ENSGAGG00000012677CNOT39960.343ENSCSEG00000016892cnot3b9960.847Cynoglossus_semilaevis
ENSGAGG00000012677CNOT38786.239ENSCSEG00000003574cnot3a6981.373Cynoglossus_semilaevis
ENSGAGG00000012677CNOT39586.697ENSCVAG00000008168cnot3a6788.235Cyprinodon_variegatus
ENSGAGG00000012677CNOT37588.339ENSCVAG00000022122cnot3b8365.789Cyprinodon_variegatus
ENSGAGG00000012677CNOT39687.215ENSDARG00000019842cnot3b7382.958Danio_rerio
ENSGAGG00000012677CNOT38887.615ENSDARG00000007135cnot3a6789.105Danio_rerio
ENSGAGG00000012677CNOT310079.098ENSDNOG00000045972CNOT39979.223Dasypus_novemcinctus
ENSGAGG00000012677CNOT310078.681ENSDORG00000008021Cnot310081.609Dipodomys_ordii
ENSGAGG00000012677CNOT36463.874FBgn0033029Not35263.874Drosophila_melanogaster
ENSGAGG00000012677CNOT371100.000ENSETEG00000006305CNOT369100.000Echinops_telfairi
ENSGAGG00000012677CNOT39955.397ENSEBUG00000010437cnot3a9955.428Eptatretus_burgeri
ENSGAGG00000012677CNOT310078.743ENSEASG00005021591CNOT39978.667Equus_asinus_asinus
ENSGAGG00000012677CNOT310078.743ENSECAG00000023181CNOT39978.828Equus_caballus
ENSGAGG00000012677CNOT310063.253ENSELUG00000014743cnot3a6678.571Esox_lucius
ENSGAGG00000012677CNOT38787.671ENSELUG00000000953cnot3b6488.716Esox_lucius
ENSGAGG00000012677CNOT310079.545ENSFCAG00000014042CNOT39979.677Felis_catus
ENSGAGG00000012677CNOT38788.073ENSFHEG00000001696cnot3b9762.295Fundulus_heteroclitus
ENSGAGG00000012677CNOT37284.862ENSFHEG00000023166cnot3a9962.098Fundulus_heteroclitus
ENSGAGG00000012677CNOT37978.636ENSGMOG00000005365cnot3a6080.934Gadus_morhua
ENSGAGG00000012677CNOT38587.156ENSGAFG00000003459cnot3b8564.798Gambusia_affinis
ENSGAGG00000012677CNOT38786.239ENSGAFG00000013094cnot3a6387.843Gambusia_affinis
ENSGAGG00000012677CNOT35880.451ENSGACG00000009395cnot3b6180.451Gasterosteus_aculeatus
ENSGAGG00000012677CNOT37879.452ENSGACG00000011489cnot3a6081.712Gasterosteus_aculeatus
ENSGAGG00000012677CNOT310079.370ENSGGOG00000012996CNOT39979.642Gorilla_gorilla
ENSGAGG00000012677CNOT37283.410ENSHBUG00000019699cnot3b7865.269Haplochromis_burtoni
ENSGAGG00000012677CNOT38787.558ENSHBUG00000005275cnot3a6588.235Haplochromis_burtoni
ENSGAGG00000012677CNOT310079.789ENSHGLG00000008821CNOT310081.609Heterocephalus_glaber_female
ENSGAGG00000012677CNOT310068.091ENSHGLG00100006181CNOT310081.609Heterocephalus_glaber_male
ENSGAGG00000012677CNOT38785.714ENSHCOG00000020968cnot3a9958.658Hippocampus_comes
ENSGAGG00000012677CNOT39987.008ENSIPUG00000000167cnot37287.008Ictalurus_punctatus
ENSGAGG00000012677CNOT39890.104ENSIPUG00000009046cnot3b6985.246Ictalurus_punctatus
ENSGAGG00000012677CNOT310079.522ENSSTOG00000028248CNOT39978.820Ictidomys_tridecemlineatus
ENSGAGG00000012677CNOT310079.066ENSJJAG00000014594Cnot310081.609Jaculus_jaculus
ENSGAGG00000012677CNOT38790.367ENSKMAG00000018723cnot3b8169.789Kryptolebias_marmoratus
ENSGAGG00000012677CNOT39786.697ENSKMAG00000004863cnot3a9963.525Kryptolebias_marmoratus
ENSGAGG00000012677CNOT38689.908ENSLBEG00000018278cnot3b6888.929Labrus_bergylta
ENSGAGG00000012677CNOT310080.560ENSLACG00000009742CNOT39980.191Latimeria_chalumnae
ENSGAGG00000012677CNOT36593.571ENSLOCG00000000005cnot3b9986.339Lepisosteus_oculatus
ENSGAGG00000012677CNOT310073.842ENSLAFG00000022133CNOT39974.000Loxodonta_africana
ENSGAGG00000012677CNOT310078.797ENSMFAG00000040073CNOT39979.011Macaca_fascicularis
ENSGAGG00000012677CNOT39972.933ENSMMUG00000009698CNOT310099.020Macaca_mulatta
ENSGAGG00000012677CNOT310078.797ENSMNEG00000036750CNOT39978.610Macaca_nemestrina
ENSGAGG00000012677CNOT310073.393ENSMLEG00000036579CNOT39974.202Mandrillus_leucophaeus
ENSGAGG00000012677CNOT38790.367ENSMAMG00000019357cnot3b8371.642Mastacembelus_armatus
ENSGAGG00000012677CNOT38788.018ENSMAMG00000019397cnot3a6388.627Mastacembelus_armatus
ENSGAGG00000012677CNOT38787.558ENSMZEG00005016304cnot3a6588.235Maylandia_zebra
ENSGAGG00000012677CNOT38792.202ENSMZEG00005002466cnot3b8069.444Maylandia_zebra
ENSGAGG00000012677CNOT310078.529ENSMAUG00000014996Cnot39978.523Mesocricetus_auratus
ENSGAGG00000012677CNOT310078.892ENSMICG00000002370CNOT39978.828Microcebus_murinus
ENSGAGG00000012677CNOT370100.000ENSMOCG00000013249Cnot399100.000Microtus_ochrogaster
ENSGAGG00000012677CNOT38084.082ENSMMOG00000016446cnot3a6386.809Mola_mola
ENSGAGG00000012677CNOT36486.307ENSMMOG00000013086cnot3b7386.307Mola_mola
ENSGAGG00000012677CNOT310077.560ENSMODG00000004066CNOT39977.718Monodelphis_domestica
ENSGAGG00000012677CNOT38785.780ENSMALG00000009204cnot3a6687.059Monopterus_albus
ENSGAGG00000012677CNOT36890.047ENSMALG00000004936cnot3b10065.326Monopterus_albus
ENSGAGG00000012677CNOT310078.797MGP_CAROLIEiJ_G0029095Cnot39994.059Mus_caroli
ENSGAGG00000012677CNOT310078.797ENSMUSG00000035632Cnot39994.059Mus_musculus
ENSGAGG00000012677CNOT310079.248MGP_PahariEiJ_G0020964Cnot39994.059Mus_pahari
ENSGAGG00000012677CNOT310078.797MGP_SPRETEiJ_G0030148Cnot39994.059Mus_spretus
ENSGAGG00000012677CNOT310077.778ENSMPUG00000010352CNOT39978.562Mustela_putorius_furo
ENSGAGG00000012677CNOT310079.279ENSNGAG00000013266Cnot39978.808Nannospalax_galili
ENSGAGG00000012677CNOT38188.235ENSNBRG00000002401cnot3a6588.235Neolamprologus_brichardi
ENSGAGG00000012677CNOT38592.517ENSNBRG00000003336cnot3b8492.517Neolamprologus_brichardi
ENSGAGG00000012677CNOT310073.700ENSNLEG00000006272CNOT39974.206Nomascus_leucogenys
ENSGAGG00000012677CNOT373100.000ENSMEUG00000002952CNOT377100.000Notamacropus_eugenii
ENSGAGG00000012677CNOT365100.000ENSOPRG00000001605-63100.000Ochotona_princeps
ENSGAGG00000012677CNOT310079.819ENSODEG00000000705CNOT310089.873Octodon_degus
ENSGAGG00000012677CNOT38787.558ENSONIG00000006568cnot3a8766.066Oreochromis_niloticus
ENSGAGG00000012677CNOT39990.459ENSONIG00000007047cnot3b8469.139Oreochromis_niloticus
ENSGAGG00000012677CNOT310078.765ENSOCUG00000007691CNOT39979.116Oryctolagus_cuniculus
ENSGAGG00000012677CNOT39487.615ENSORLG00000011174cnot3a7482.201Oryzias_latipes
ENSGAGG00000012677CNOT38191.373ENSORLG00000005982cnot3b8169.697Oryzias_latipes
ENSGAGG00000012677CNOT39286.926ENSORLG00020008009cnot3a7481.877Oryzias_latipes_hni
ENSGAGG00000012677CNOT39790.826ENSORLG00020005779cnot3b9164.916Oryzias_latipes_hni
ENSGAGG00000012677CNOT39487.156ENSORLG00015013729cnot3a6983.000Oryzias_latipes_hsok
ENSGAGG00000012677CNOT38790.826ENSORLG00015019021cnot3b8070.336Oryzias_latipes_hsok
ENSGAGG00000012677CNOT39487.615ENSOMEG00000010309cnot3a9965.188Oryzias_melastigma
ENSGAGG00000012677CNOT38788.991ENSOMEG00000015557cnot3b9069.108Oryzias_melastigma
ENSGAGG00000012677CNOT310079.310ENSOGAG00000006945CNOT39979.067Otolemur_garnettii
ENSGAGG00000012677CNOT39947.684ENSOARG00000002981CNOT39947.418Ovis_aries
ENSGAGG00000012677CNOT310079.370ENSPPAG00000002748CNOT39979.642Pan_paniscus
ENSGAGG00000012677CNOT310079.545ENSPPRG00000011705CNOT39979.677Panthera_pardus
ENSGAGG00000012677CNOT37998.104ENSPTIG00000008781CNOT39985.366Panthera_tigris_altaica
ENSGAGG00000012677CNOT310079.370ENSPTRG00000011444CNOT39979.642Pan_troglodytes
ENSGAGG00000012677CNOT310079.370ENSPTRG00000046717-9979.642Pan_troglodytes
ENSGAGG00000012677CNOT310079.248ENSPANG00000009375CNOT39979.011Papio_anubis
ENSGAGG00000012677CNOT39590.367ENSPKIG00000011733CNOT36591.373Paramormyrops_kingsleyae
ENSGAGG00000012677CNOT37994.043ENSPKIG00000015967-9965.406Paramormyrops_kingsleyae
ENSGAGG00000012677CNOT37088.302ENSPMGG00000022539cnot3b9368.063Periophthalmus_magnuspinnatus
ENSGAGG00000012677CNOT310079.310ENSPEMG00000024185Cnot39978.249Peromyscus_maniculatus_bairdii
ENSGAGG00000012677CNOT310082.166ENSPCIG00000023018CNOT39495.470Phascolarctos_cinereus
ENSGAGG00000012677CNOT39586.239ENSPFOG00000008693cnot3a9964.545Poecilia_formosa
ENSGAGG00000012677CNOT38787.156ENSPFOG00000007168cnot3b8268.750Poecilia_formosa
ENSGAGG00000012677CNOT38787.156ENSPLAG00000013457cnot3b8268.750Poecilia_latipinna
ENSGAGG00000012677CNOT39087.843ENSPLAG00000013324cnot3a6687.843Poecilia_latipinna
ENSGAGG00000012677CNOT39786.239ENSPMEG00000017718cnot3a6787.843Poecilia_mexicana
ENSGAGG00000012677CNOT38787.156ENSPMEG00000010184cnot3b8269.048Poecilia_mexicana
ENSGAGG00000012677CNOT38886.301ENSPREG00000007592cnot3a8382.941Poecilia_reticulata
ENSGAGG00000012677CNOT38788.532ENSPREG00000000662cnot3b8764.871Poecilia_reticulata
ENSGAGG00000012677CNOT310078.561ENSPPYG00000010372CNOT39978.800Pongo_abelii
ENSGAGG00000012677CNOT37897.458ENSPCAG00000011999CNOT37797.458Procavia_capensis
ENSGAGG00000012677CNOT310079.535ENSPCOG00000017673CNOT39980.220Propithecus_coquereli
ENSGAGG00000012677CNOT310076.621ENSPVAG00000015564CNOT39977.315Pteropus_vampyrus
ENSGAGG00000012677CNOT39988.552ENSPNYG00000003358cnot3b8266.882Pundamilia_nyererei
ENSGAGG00000012677CNOT38787.558ENSPNYG00000002282cnot3a6588.235Pundamilia_nyererei
ENSGAGG00000012677CNOT39989.286ENSPNAG00000027459cnot3b7089.286Pygocentrus_nattereri
ENSGAGG00000012677CNOT38886.239ENSPNAG00000017679cnot3a9960.728Pygocentrus_nattereri
ENSGAGG00000012677CNOT310079.460ENSRNOG00000053234Cnot39977.955Rattus_norvegicus
ENSGAGG00000012677CNOT310078.647ENSRBIG00000031025CNOT39978.877Rhinopithecus_bieti
ENSGAGG00000012677CNOT310078.647ENSRROG00000003872CNOT39979.011Rhinopithecus_roxellana
ENSGAGG00000012677CNOT310080.000ENSSBOG00000030268CNOT39979.861Saimiri_boliviensis_boliviensis
ENSGAGG00000012677CNOT35098.969ENSSHAG00000009131-10082.927Sarcophilus_harrisii
ENSGAGG00000012677CNOT38790.367ENSSFOG00015000248cnot39165.875Scleropages_formosus
ENSGAGG00000012677CNOT39991.339ENSSFOG00015019203-6791.339Scleropages_formosus
ENSGAGG00000012677CNOT38787.558ENSSMAG00000013235cnot3a6388.235Scophthalmus_maximus
ENSGAGG00000012677CNOT38891.743ENSSMAG00000016031cnot3b8666.523Scophthalmus_maximus
ENSGAGG00000012677CNOT38189.069ENSSDUG00000008181cnot3a9962.639Seriola_dumerili
ENSGAGG00000012677CNOT38791.743ENSSDUG00000003428cnot3b8172.340Seriola_dumerili
ENSGAGG00000012677CNOT38791.743ENSSLDG00000014376cnot3b8172.036Seriola_lalandi_dorsalis
ENSGAGG00000012677CNOT38288.018ENSSLDG00000014733cnot3a6782.680Seriola_lalandi_dorsalis
ENSGAGG00000012677CNOT310089.748ENSSPUG00000008510CNOT39987.812Sphenodon_punctatus
ENSGAGG00000012677CNOT38790.367ENSSPAG00000001429cnot3b6789.753Stegastes_partitus
ENSGAGG00000012677CNOT38287.097ENSSPAG00000003858cnot3a7186.713Stegastes_partitus
ENSGAGG00000012677CNOT310078.892ENSSSCG00000003264CNOT39979.228Sus_scrofa
ENSGAGG00000012677CNOT38189.412ENSTRUG00000015732cnot3a6489.412Takifugu_rubripes
ENSGAGG00000012677CNOT36890.459ENSTRUG00000007248cnot3b5882.323Takifugu_rubripes
ENSGAGG00000012677CNOT37777.348ENSTNIG00000005663cnot3b7376.294Tetraodon_nigroviridis
ENSGAGG00000012677CNOT37788.626ENSTNIG00000008082cnot3a6289.412Tetraodon_nigroviridis
ENSGAGG00000012677CNOT35599.248ENSTBEG00000009620-5299.248Tupaia_belangeri
ENSGAGG00000012677CNOT35599.355ENSTTRG00000006567CNOT37499.355Tursiops_truncatus
ENSGAGG00000012677CNOT310079.186ENSUAMG00000005234CNOT39979.223Ursus_americanus
ENSGAGG00000012677CNOT37596.209ENSUMAG00000010934CNOT39495.397Ursus_maritimus
ENSGAGG00000012677CNOT35395.833ENSVPAG00000001320-5298.020Vicugna_pacos
ENSGAGG00000012677CNOT39978.829ENSVVUG00000008239CNOT39977.654Vulpes_vulpes
ENSGAGG00000012677CNOT310087.451ENSXETG00000003166cnot39983.379Xenopus_tropicalis
ENSGAGG00000012677CNOT37583.168ENSXCOG00000019460cnot3a9962.378Xiphophorus_couchianus
ENSGAGG00000012677CNOT37788.627ENSXCOG00000018976cnot3b8465.996Xiphophorus_couchianus
ENSGAGG00000012677CNOT38786.239ENSXMAG00000012273cnot3a6887.843Xiphophorus_maculatus
ENSGAGG00000012677CNOT38788.073ENSXMAG00000014176cnot3b8565.275Xiphophorus_maculatus

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