EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000012851 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 47672 bases
Position: chrPPEB01000112.1:284853-332524
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000017262	Translin	PF01997.16	1.5e-62	1	1
ENSGAGP00000017257	Translin	PF01997.16	1.8e-62	1	1
ENSGAGP00000017260	Translin	PF01997.16	1.8e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000019685	-	2690	-	ENSGAGP00000017257	291 (aa)	-	-
ENSGAGT00000019688	-	2690	-	ENSGAGP00000017260	291 (aa)	-	-
ENSGAGT00000019690	-	2241	-	ENSGAGP00000017262	269 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000012851's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000012851's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000012851	-	100	81.787	ENSG00000116918	TSNAX	100	81.787	Homo_sapiens
ENSGAGG00000012851	-	97	66.540	ENSAPOG00000011188	tsnax	99	63.448	Acanthochromis_polyacanthus
ENSGAGG00000012851	-	100	82.131	ENSAMEG00000002637	-	100	82.131	Ailuropoda_melanoleuca
ENSGAGG00000012851	-	99	63.793	ENSACIG00000005910	tsnax	99	63.793	Amphilophus_citrinellus
ENSGAGG00000012851	-	99	65.172	ENSAOCG00000012857	tsnax	99	65.172	Amphiprion_ocellaris
ENSGAGG00000012851	-	99	64.483	ENSAPEG00000024161	tsnax	99	67.939	Amphiprion_percula
ENSGAGG00000012851	-	99	63.793	ENSATEG00000014674	tsnax	99	63.793	Anabas_testudineus
ENSGAGG00000012851	-	98	88.112	ENSAPLG00000013433	-	98	88.112	Anas_platyrhynchos
ENSGAGG00000012851	-	100	85.911	ENSACAG00000002787	-	100	86.942	Anolis_carolinensis
ENSGAGG00000012851	-	100	82.131	ENSANAG00000023733	-	100	82.131	Aotus_nancymaae
ENSGAGG00000012851	-	78	66.029	ENSACLG00000023252	tsnax	86	66.029	Astatotilapia_calliptera
ENSGAGG00000012851	-	98	63.258	ENSAMXG00000024558	tsnax	100	60.481	Astyanax_mexicanus
ENSGAGG00000012851	-	100	81.443	ENSBTAG00000047434	TSNAX	100	81.443	Bos_taurus
ENSGAGG00000012851	-	100	82.131	ENSCJAG00000039956	-	100	82.131	Callithrix_jacchus
ENSGAGG00000012851	-	100	82.131	ENSCAFG00000030982	-	100	82.131	Canis_familiaris
ENSGAGG00000012851	-	100	82.131	ENSCAFG00020027186	-	100	82.131	Canis_lupus_dingo
ENSGAGG00000012851	-	100	81.787	ENSCHIG00000012051	-	100	81.787	Capra_hircus
ENSGAGG00000012851	-	93	83.936	ENSTSYG00000014070	-	99	83.936	Carlito_syrichta
ENSGAGG00000012851	-	100	81.787	ENSTSYG00000026820	-	100	81.787	Carlito_syrichta
ENSGAGG00000012851	-	91	84.553	ENSCAPG00000007224	-	95	84.553	Cavia_aperea
ENSGAGG00000012851	-	100	83.505	ENSCPOG00000036257	-	100	83.505	Cavia_porcellus
ENSGAGG00000012851	-	100	82.131	ENSCCAG00000025312	-	100	82.131	Cebus_capucinus
ENSGAGG00000012851	-	100	81.100	ENSCATG00000037048	TSNAX	100	81.100	Cercocebus_atys
ENSGAGG00000012851	-	100	82.818	ENSCLAG00000004894	-	100	82.818	Chinchilla_lanigera
ENSGAGG00000012851	-	100	80.756	ENSCSAG00000010285	TSNAX	100	80.756	Chlorocebus_sabaeus
ENSGAGG00000012851	-	93	82.329	ENSCHOG00000009515	-	100	82.329	Choloepus_hoffmanni
ENSGAGG00000012851	-	100	98.282	ENSCPBG00000006086	-	100	98.282	Chrysemys_picta_bellii
ENSGAGG00000012851	-	100	81.787	ENSCANG00000018814	TSNAX	100	81.787	Colobus_angolensis_palliatus
ENSGAGG00000012851	-	100	80.412	ENSCGRG00001011132	Tsnax	100	80.412	Cricetulus_griseus_chok1gshd
ENSGAGG00000012851	-	100	80.412	ENSCGRG00000017310	Tsnax	100	80.412	Cricetulus_griseus_crigri
ENSGAGG00000012851	-	97	68.061	ENSCSEG00000013110	tsnax	92	69.084	Cynoglossus_semilaevis
ENSGAGG00000012851	-	99	56.897	ENSCVAG00000003427	tsnax	99	56.897	Cyprinodon_variegatus
ENSGAGG00000012851	-	100	63.918	ENSDARG00000115282	tsnax	100	63.918	Danio_rerio
ENSGAGG00000012851	-	100	81.849	ENSDNOG00000049219	-	100	81.849	Dasypus_novemcinctus
ENSGAGG00000012851	-	97	81.609	ENSDORG00000013537	Tsnax	98	81.609	Dipodomys_ordii
ENSGAGG00000012851	-	92	36.806	FBgn0038327	Trax	93	36.806	Drosophila_melanogaster
ENSGAGG00000012851	-	71	79.042	ENSETEG00000005204	-	71	79.042	Echinops_telfairi
ENSGAGG00000012851	-	88	59.504	ENSEBUG00000013286	tsnax	94	59.917	Eptatretus_burgeri
ENSGAGG00000012851	-	100	81.100	ENSEASG00005012828	-	100	81.100	Equus_asinus_asinus
ENSGAGG00000012851	-	100	67.354	ENSEEUG00000001465	-	100	67.354	Erinaceus_europaeus
ENSGAGG00000012851	-	98	68.061	ENSELUG00000018955	tsnax	99	64.261	Esox_lucius
ENSGAGG00000012851	-	100	81.787	ENSFCAG00000028088	-	100	81.787	Felis_catus
ENSGAGG00000012851	-	98	88.732	ENSFALG00000003260	-	99	88.732	Ficedula_albicollis
ENSGAGG00000012851	-	98	83.509	ENSFDAG00000015968	-	100	83.509	Fukomys_damarensis
ENSGAGG00000012851	-	94	67.323	ENSFHEG00000005717	tsnax	99	65.428	Fundulus_heteroclitus
ENSGAGG00000012851	-	94	65.490	ENSGMOG00000018552	tsnax	99	64.103	Gadus_morhua
ENSGAGG00000012851	-	100	87.629	ENSGALG00000037177	TSNAX	100	87.629	Gallus_gallus
ENSGAGG00000012851	-	99	63.448	ENSGAFG00000005000	tsnax	99	63.448	Gambusia_affinis
ENSGAGG00000012851	-	93	67.323	ENSGACG00000004171	tsnax	93	65.799	Gasterosteus_aculeatus
ENSGAGG00000012851	-	100	81.787	ENSGGOG00000039786	TSNAX	100	81.787	Gorilla_gorilla
ENSGAGG00000012851	-	99	63.793	ENSHBUG00000020612	tsnax	99	63.793	Haplochromis_burtoni
ENSGAGG00000012851	-	100	83.162	ENSHGLG00000012839	TSNAX	100	83.162	Heterocephalus_glaber_female
ENSGAGG00000012851	-	100	81.787	ENSHGLG00100000780	-	100	81.787	Heterocephalus_glaber_male
ENSGAGG00000012851	-	93	68.924	ENSHCOG00000009732	tsnax	90	68.605	Hippocampus_comes
ENSGAGG00000012851	-	99	65.625	ENSIPUG00000018757	tsnax	100	65.625	Ictalurus_punctatus
ENSGAGG00000012851	-	56	77.301	ENSSTOG00000024989	-	96	77.301	Ictidomys_tridecemlineatus
ENSGAGG00000012851	-	100	78.351	ENSJJAG00000000228	-	100	78.351	Jaculus_jaculus
ENSGAGG00000012851	-	95	66.667	ENSJJAG00000012285	-	100	66.667	Jaculus_jaculus
ENSGAGG00000012851	-	100	63.574	ENSKMAG00000010607	tsnax	100	63.574	Kryptolebias_marmoratus
ENSGAGG00000012851	-	99	65.172	ENSLBEG00000023264	tsnax	99	65.172	Labrus_bergylta
ENSGAGG00000012851	-	93	69.323	ENSLBEG00000002951	-	93	67.416	Labrus_bergylta
ENSGAGG00000012851	-	100	72.696	ENSLACG00000006294	tsnax	100	72.696	Latimeria_chalumnae
ENSGAGG00000012851	-	100	68.367	ENSLOCG00000015831	tsnax	100	68.367	Lepisosteus_oculatus
ENSGAGG00000012851	-	100	73.898	ENSLAFG00000006692	-	100	73.898	Loxodonta_africana
ENSGAGG00000012851	-	100	81.100	ENSMFAG00000038495	TSNAX	100	81.100	Macaca_fascicularis
ENSGAGG00000012851	-	59	75.723	ENSMMUG00000016204	TSNAX	92	75.723	Macaca_mulatta
ENSGAGG00000012851	-	100	81.100	ENSMNEG00000038898	TSNAX	100	81.100	Macaca_nemestrina
ENSGAGG00000012851	-	100	80.756	ENSMLEG00000004157	TSNAX	100	80.756	Mandrillus_leucophaeus
ENSGAGG00000012851	-	99	64.483	ENSMAMG00000016932	tsnax	99	64.483	Mastacembelus_armatus
ENSGAGG00000012851	-	97	66.540	ENSMZEG00005010018	tsnax	99	63.793	Maylandia_zebra
ENSGAGG00000012851	-	98	88.112	ENSMGAG00000011981	-	100	88.112	Meleagris_gallopavo
ENSGAGG00000012851	-	56	76.829	ENSMAUG00000019962	Tsnax	97	76.829	Mesocricetus_auratus
ENSGAGG00000012851	-	100	82.131	ENSMICG00000043895	-	100	82.131	Microcebus_murinus
ENSGAGG00000012851	-	100	80.756	ENSMOCG00000007651	Tsnax	100	80.756	Microtus_ochrogaster
ENSGAGG00000012851	-	92	70.968	ENSMMOG00000008821	tsnax	99	66.308	Mola_mola
ENSGAGG00000012851	-	94	86.508	ENSMODG00000008812	-	100	87.059	Monodelphis_domestica
ENSGAGG00000012851	-	99	63.448	ENSMALG00000005640	tsnax	99	63.448	Monopterus_albus
ENSGAGG00000012851	-	100	77.663	MGP_CAROLIEiJ_G0031718	Tsnax	100	77.663	Mus_caroli
ENSGAGG00000012851	-	100	78.007	ENSMUSG00000056820	Tsnax	100	78.007	Mus_musculus
ENSGAGG00000012851	-	100	78.351	MGP_PahariEiJ_G0023316	Tsnax	100	78.351	Mus_pahari
ENSGAGG00000012851	-	100	78.351	MGP_SPRETEiJ_G0032836	Tsnax	100	78.351	Mus_spretus
ENSGAGG00000012851	-	100	82.131	ENSMPUG00000005572	-	100	82.131	Mustela_putorius_furo
ENSGAGG00000012851	-	62	82.738	ENSMLUG00000028551	-	99	82.738	Myotis_lucifugus
ENSGAGG00000012851	-	99	78.007	ENSMLUG00000015591	-	99	78.007	Myotis_lucifugus
ENSGAGG00000012851	-	100	81.787	ENSNGAG00000014498	Tsnax	100	81.787	Nannospalax_galili
ENSGAGG00000012851	-	92	68.548	ENSNBRG00000020060	tsnax	98	63.604	Neolamprologus_brichardi
ENSGAGG00000012851	-	100	81.443	ENSNLEG00000035882	TSNAX	100	81.443	Nomascus_leucogenys
ENSGAGG00000012851	-	100	69.863	ENSOPRG00000008613	-	100	69.863	Ochotona_princeps
ENSGAGG00000012851	-	98	60.702	ENSODEG00000000115	-	100	60.702	Octodon_degus
ENSGAGG00000012851	-	95	77.256	ENSODEG00000005475	-	100	77.256	Octodon_degus
ENSGAGG00000012851	-	99	64.483	ENSONIG00000010125	tsnax	99	64.483	Oreochromis_niloticus
ENSGAGG00000012851	-	98	77.003	ENSOANG00000013721	-	100	77.003	Ornithorhynchus_anatinus
ENSGAGG00000012851	-	100	82.131	ENSOCUG00000029456	-	100	82.131	Oryctolagus_cuniculus
ENSGAGG00000012851	-	100	62.543	ENSORLG00000030285	tsnax	100	62.543	Oryzias_latipes
ENSGAGG00000012851	-	100	62.887	ENSORLG00020007594	tsnax	100	62.887	Oryzias_latipes_hni
ENSGAGG00000012851	-	100	63.230	ENSORLG00015022705	tsnax	100	63.230	Oryzias_latipes_hsok
ENSGAGG00000012851	-	94	67.460	ENSOMEG00000019256	tsnax	92	67.308	Oryzias_melastigma
ENSGAGG00000012851	-	100	82.131	ENSOGAG00000027793	-	100	82.131	Otolemur_garnettii
ENSGAGG00000012851	-	99	82.639	ENSOGAG00000005575	-	99	82.639	Otolemur_garnettii
ENSGAGG00000012851	-	100	81.787	ENSOARG00000003276	-	100	81.787	Ovis_aries
ENSGAGG00000012851	-	100	81.787	ENSPPAG00000030431	TSNAX	100	81.787	Pan_paniscus
ENSGAGG00000012851	-	100	81.443	ENSPPRG00000013142	-	100	81.443	Panthera_pardus
ENSGAGG00000012851	-	100	81.443	ENSPTIG00000014357	-	100	81.443	Panthera_tigris_altaica
ENSGAGG00000012851	-	100	81.443	ENSPTRG00000002111	TSNAX	100	81.443	Pan_troglodytes
ENSGAGG00000012851	-	100	81.100	ENSPANG00000008379	TSNAX	100	81.100	Papio_anubis
ENSGAGG00000012851	-	100	67.698	ENSPKIG00000023546	tsnax	100	67.698	Paramormyrops_kingsleyae
ENSGAGG00000012851	-	66	94.944	ENSPSIG00000005320	-	100	94.944	Pelodiscus_sinensis
ENSGAGG00000012851	-	93	69.048	ENSPMGG00000015045	tsnax	93	68.821	Periophthalmus_magnuspinnatus
ENSGAGG00000012851	-	99	63.448	ENSPFOG00000019341	tsnax	99	63.448	Poecilia_formosa
ENSGAGG00000012851	-	99	62.799	ENSPLAG00000011565	tsnax	99	62.799	Poecilia_latipinna
ENSGAGG00000012851	-	99	63.793	ENSPMEG00000023751	tsnax	99	63.793	Poecilia_mexicana
ENSGAGG00000012851	-	92	69.355	ENSPREG00000008389	tsnax	86	69.355	Poecilia_reticulata
ENSGAGG00000012851	-	100	81.787	ENSPPYG00000000112	TSNAX	100	81.787	Pongo_abelii
ENSGAGG00000012851	-	93	84.337	ENSPCAG00000015420	-	100	84.337	Procavia_capensis
ENSGAGG00000012851	-	100	82.818	ENSPCOG00000028517	-	100	82.818	Propithecus_coquereli
ENSGAGG00000012851	-	100	80.412	ENSPVAG00000008865	-	100	80.412	Pteropus_vampyrus
ENSGAGG00000012851	-	99	63.793	ENSPNYG00000013680	tsnax	99	63.793	Pundamilia_nyererei
ENSGAGG00000012851	-	94	69.048	ENSPNAG00000014630	tsnax	98	63.287	Pygocentrus_nattereri
ENSGAGG00000012851	-	100	78.007	ENSRNOG00000049784	Tsnax	100	78.007	Rattus_norvegicus
ENSGAGG00000012851	-	100	80.756	ENSRBIG00000040246	TSNAX	100	80.756	Rhinopithecus_bieti
ENSGAGG00000012851	-	100	80.756	ENSRROG00000044480	TSNAX	100	80.756	Rhinopithecus_roxellana
ENSGAGG00000012851	-	100	82.474	ENSSBOG00000024783	-	100	82.474	Saimiri_boliviensis_boliviensis
ENSGAGG00000012851	-	79	84.906	ENSSHAG00000006139	-	100	84.906	Sarcophilus_harrisii
ENSGAGG00000012851	-	100	68.475	ENSSFOG00015008267	tsnax	100	68.475	Scleropages_formosus
ENSGAGG00000012851	-	93	69.531	ENSSMAG00000010696	tsnax	99	63.051	Scophthalmus_maximus
ENSGAGG00000012851	-	99	65.172	ENSSDUG00000003358	tsnax	99	65.172	Seriola_dumerili
ENSGAGG00000012851	-	99	64.828	ENSSLDG00000024597	tsnax	99	64.828	Seriola_lalandi_dorsalis
ENSGAGG00000012851	-	99	79.585	ENSSARG00000011348	-	99	79.585	Sorex_araneus
ENSGAGG00000012851	-	100	86.254	ENSSPUG00000012541	-	100	86.254	Sphenodon_punctatus
ENSGAGG00000012851	-	97	67.300	ENSSPAG00000006951	tsnax	99	64.483	Stegastes_partitus
ENSGAGG00000012851	-	100	81.100	ENSSSCG00000010171	TSNAX	100	81.100	Sus_scrofa
ENSGAGG00000012851	-	99	89.655	ENSTGUG00000010090	-	99	89.655	Taeniopygia_guttata
ENSGAGG00000012851	-	93	66.135	ENSTRUG00000013041	tsnax	91	65.251	Takifugu_rubripes
ENSGAGG00000012851	-	93	67.331	ENSTNIG00000002351	tsnax	93	65.414	Tetraodon_nigroviridis
ENSGAGG00000012851	-	100	55.670	ENSTBEG00000015973	-	100	55.670	Tupaia_belangeri
ENSGAGG00000012851	-	93	82.329	ENSTTRG00000016578	-	100	82.329	Tursiops_truncatus
ENSGAGG00000012851	-	55	81.132	ENSUAMG00000013798	-	94	81.132	Ursus_americanus
ENSGAGG00000012851	-	54	83.333	ENSUAMG00000002616	-	99	83.333	Ursus_americanus
ENSGAGG00000012851	-	98	79.371	ENSUMAG00000005995	-	99	79.371	Ursus_maritimus
ENSGAGG00000012851	-	81	79.661	ENSVPAG00000003808	-	100	79.661	Vicugna_pacos
ENSGAGG00000012851	-	100	82.131	ENSVVUG00000007083	-	100	82.131	Vulpes_vulpes
ENSGAGG00000012851	-	98	66.890	ENSXETG00000026152	tsnax	99	66.890	Xenopus_tropicalis
ENSGAGG00000012851	-	99	64.138	ENSXCOG00000006896	tsnax	99	64.684	Xiphophorus_couchianus
ENSGAGG00000012851	-	99	63.103	ENSXMAG00000006738	tsnax	99	63.103	Xiphophorus_maculatus