EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000012918 (Gene tree)
Gene ID: -
Gene Symbol: RPP40
Alias: RNASEP1|bA428J1.3
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 18867 bases
Position: chrPPEB01000114.1:478485-497351
Accession: 20992
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000017358	Ribonuc_P_40	PF08584.11	5.4e-93	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000019802	RPP40-201	1417	-	ENSGAGP00000017358	364 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000012918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000012918's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000012918	RPP40	99	69.444	ENSG00000124787	RPP40	99	70.199	Homo_sapiens
ENSGAGG00000012918	RPP40	88	33.230	ENSAPOG00000008660	rpp40	92	33.230	Acanthochromis_polyacanthus
ENSGAGG00000012918	RPP40	99	70.278	ENSAMEG00000012938	RPP40	99	70.278	Ailuropoda_melanoleuca
ENSGAGG00000012918	RPP40	99	37.027	ENSACIG00000003617	rpp40	99	37.027	Amphilophus_citrinellus
ENSGAGG00000012918	RPP40	98	38.936	ENSAOCG00000011846	rpp40	99	38.936	Amphiprion_ocellaris
ENSGAGG00000012918	RPP40	98	38.936	ENSAPEG00000001322	rpp40	99	38.936	Amphiprion_percula
ENSGAGG00000012918	RPP40	98	41.226	ENSATEG00000006584	rpp40	99	41.226	Anabas_testudineus
ENSGAGG00000012918	RPP40	83	83.113	ENSAPLG00000005691	RPP40	99	83.113	Anas_platyrhynchos
ENSGAGG00000012918	RPP40	99	78.237	ENSACAG00000006550	RPP40	89	78.237	Anolis_carolinensis
ENSGAGG00000012918	RPP40	99	68.333	ENSANAG00000029246	RPP40	99	68.333	Aotus_nancymaae
ENSGAGG00000012918	RPP40	96	40.171	ENSACLG00000015883	rpp40	95	40.171	Astatotilapia_calliptera
ENSGAGG00000012918	RPP40	98	48.459	ENSAMXG00000001755	rpp40	99	48.459	Astyanax_mexicanus
ENSGAGG00000012918	RPP40	99	71.111	ENSBTAG00000003332	RPP40	99	71.111	Bos_taurus
ENSGAGG00000012918	RPP40	99	69.444	ENSCJAG00000021373	RPP40	99	69.444	Callithrix_jacchus
ENSGAGG00000012918	RPP40	99	70.556	ENSCAFG00000009435	RPP40	99	70.556	Canis_familiaris
ENSGAGG00000012918	RPP40	99	70.556	ENSCAFG00020013380	RPP40	99	70.556	Canis_lupus_dingo
ENSGAGG00000012918	RPP40	99	70.833	ENSCHIG00000016849	RPP40	99	71.854	Capra_hircus
ENSGAGG00000012918	RPP40	99	70.556	ENSTSYG00000032857	RPP40	99	71.523	Carlito_syrichta
ENSGAGG00000012918	RPP40	91	65.559	ENSCAPG00000004957	RPP40	99	65.559	Cavia_aperea
ENSGAGG00000012918	RPP40	99	70.833	ENSCPOG00000005855	RPP40	99	70.833	Cavia_porcellus
ENSGAGG00000012918	RPP40	99	69.722	ENSCCAG00000019809	RPP40	99	69.722	Cebus_capucinus
ENSGAGG00000012918	RPP40	99	69.444	ENSCATG00000038787	RPP40	99	69.444	Cercocebus_atys
ENSGAGG00000012918	RPP40	99	70.556	ENSCLAG00000003235	RPP40	99	70.556	Chinchilla_lanigera
ENSGAGG00000012918	RPP40	99	69.167	ENSCSAG00000007307	RPP40	99	69.167	Chlorocebus_sabaeus
ENSGAGG00000012918	RPP40	69	57.200	ENSCHOG00000005856	-	100	57.200	Choloepus_hoffmanni
ENSGAGG00000012918	RPP40	100	96.978	ENSCPBG00000009003	RPP40	100	96.978	Chrysemys_picta_bellii
ENSGAGG00000012918	RPP40	99	69.722	ENSCANG00000033965	RPP40	99	69.722	Colobus_angolensis_palliatus
ENSGAGG00000012918	RPP40	99	68.611	ENSCGRG00001018328	Rpp40	99	68.611	Cricetulus_griseus_chok1gshd
ENSGAGG00000012918	RPP40	99	68.611	ENSCGRG00000011344	Rpp40	99	68.611	Cricetulus_griseus_crigri
ENSGAGG00000012918	RPP40	98	37.079	ENSCSEG00000015006	-	98	37.079	Cynoglossus_semilaevis
ENSGAGG00000012918	RPP40	74	35.294	ENSCVAG00000012169	rpp40	100	35.294	Cyprinodon_variegatus
ENSGAGG00000012918	RPP40	98	50.975	ENSDARG00000017605	rpp40	99	50.975	Danio_rerio
ENSGAGG00000012918	RPP40	81	67.007	ENSDNOG00000048136	RPP40	99	67.007	Dasypus_novemcinctus
ENSGAGG00000012918	RPP40	99	52.561	ENSDORG00000011196	-	99	52.561	Dipodomys_ordii
ENSGAGG00000012918	RPP40	99	69.167	ENSDORG00000029944	-	99	69.167	Dipodomys_ordii
ENSGAGG00000012918	RPP40	99	55.556	ENSETEG00000007458	RPP40	99	55.556	Echinops_telfairi
ENSGAGG00000012918	RPP40	98	44.818	ENSEBUG00000000386	rpp40	99	44.892	Eptatretus_burgeri
ENSGAGG00000012918	RPP40	99	70.278	ENSEASG00005012116	RPP40	79	70.278	Equus_asinus_asinus
ENSGAGG00000012918	RPP40	99	70.278	ENSECAG00000017247	RPP40	79	70.278	Equus_caballus
ENSGAGG00000012918	RPP40	81	52.721	ENSEEUG00000012087	RPP40	99	52.721	Erinaceus_europaeus
ENSGAGG00000012918	RPP40	98	52.514	ENSELUG00000017004	rpp40	99	52.514	Esox_lucius
ENSGAGG00000012918	RPP40	99	69.444	ENSFCAG00000009249	RPP40	99	69.444	Felis_catus
ENSGAGG00000012918	RPP40	86	79.817	ENSFALG00000013166	RPP40	100	79.817	Ficedula_albicollis
ENSGAGG00000012918	RPP40	81	59.322	ENSFDAG00000000265	-	100	59.322	Fukomys_damarensis
ENSGAGG00000012918	RPP40	99	71.944	ENSFDAG00000013001	-	99	71.944	Fukomys_damarensis
ENSGAGG00000012918	RPP40	98	40.616	ENSFHEG00000021429	rpp40	88	40.616	Fundulus_heteroclitus
ENSGAGG00000012918	RPP40	88	40.062	ENSGMOG00000018653	rpp40	100	40.062	Gadus_morhua
ENSGAGG00000012918	RPP40	100	80.220	ENSGALG00000036074	RPP40	100	80.220	Gallus_gallus
ENSGAGG00000012918	RPP40	82	35.235	ENSGAFG00000004189	-	98	35.235	Gambusia_affinis
ENSGAGG00000012918	RPP40	98	39.496	ENSGACG00000002472	rpp40	99	39.496	Gasterosteus_aculeatus
ENSGAGG00000012918	RPP40	99	69.722	ENSGGOG00000013764	RPP40	99	69.722	Gorilla_gorilla
ENSGAGG00000012918	RPP40	88	39.441	ENSHBUG00000009378	rpp40	92	39.441	Haplochromis_burtoni
ENSGAGG00000012918	RPP40	99	71.667	ENSHGLG00000004871	RPP40	99	71.667	Heterocephalus_glaber_female
ENSGAGG00000012918	RPP40	99	71.667	ENSHGLG00100002080	RPP40	99	71.667	Heterocephalus_glaber_male
ENSGAGG00000012918	RPP40	97	32.295	ENSHCOG00000013264	-	94	32.295	Hippocampus_comes
ENSGAGG00000012918	RPP40	99	49.444	ENSIPUG00000008951	RPP40	99	49.444	Ictalurus_punctatus
ENSGAGG00000012918	RPP40	99	70.083	ENSSTOG00000011199	RPP40	99	70.083	Ictidomys_tridecemlineatus
ENSGAGG00000012918	RPP40	99	66.944	ENSJJAG00000020629	Rpp40	99	66.944	Jaculus_jaculus
ENSGAGG00000012918	RPP40	98	38.095	ENSKMAG00000019358	rpp40	99	38.095	Kryptolebias_marmoratus
ENSGAGG00000012918	RPP40	98	40.896	ENSLBEG00000022724	rpp40	99	40.896	Labrus_bergylta
ENSGAGG00000012918	RPP40	99	63.056	ENSLACG00000014848	RPP40	99	63.056	Latimeria_chalumnae
ENSGAGG00000012918	RPP40	99	55.278	ENSLOCG00000011650	rpp40	99	55.278	Lepisosteus_oculatus
ENSGAGG00000012918	RPP40	83	71.523	ENSLAFG00000007530	RPP40	99	71.523	Loxodonta_africana
ENSGAGG00000012918	RPP40	99	69.167	ENSMFAG00000043100	RPP40	99	69.167	Macaca_fascicularis
ENSGAGG00000012918	RPP40	99	69.444	ENSMMUG00000004966	RPP40	99	69.444	Macaca_mulatta
ENSGAGG00000012918	RPP40	99	69.167	ENSMNEG00000041986	RPP40	99	70.333	Macaca_nemestrina
ENSGAGG00000012918	RPP40	98	62.465	ENSMLEG00000040851	RPP40	100	72.727	Mandrillus_leucophaeus
ENSGAGG00000012918	RPP40	98	40.616	ENSMAMG00000019551	rpp40	98	40.616	Mastacembelus_armatus
ENSGAGG00000012918	RPP40	98	40.616	ENSMZEG00005019475	rpp40	99	40.616	Maylandia_zebra
ENSGAGG00000012918	RPP40	89	80.864	ENSMGAG00000004009	RPP40	90	80.864	Meleagris_gallopavo
ENSGAGG00000012918	RPP40	99	70.556	ENSMAUG00000010268	Rpp40	99	70.556	Mesocricetus_auratus
ENSGAGG00000012918	RPP40	99	69.167	ENSMICG00000003297	RPP40	99	64.444	Microcebus_murinus
ENSGAGG00000012918	RPP40	99	69.444	ENSMOCG00000000305	Rpp40	99	69.444	Microtus_ochrogaster
ENSGAGG00000012918	RPP40	98	33.053	ENSMMOG00000020591	-	99	33.053	Mola_mola
ENSGAGG00000012918	RPP40	99	72.576	ENSMODG00000009826	RPP40	99	72.576	Monodelphis_domestica
ENSGAGG00000012918	RPP40	98	40.056	ENSMALG00000020133	rpp40	99	40.056	Monopterus_albus
ENSGAGG00000012918	RPP40	99	69.167	MGP_CAROLIEiJ_G0018429	Rpp40	99	69.167	Mus_caroli
ENSGAGG00000012918	RPP40	99	70.556	ENSMUSG00000021418	Rpp40	99	70.556	Mus_musculus
ENSGAGG00000012918	RPP40	99	70.000	MGP_PahariEiJ_G0019497	Rpp40	99	70.000	Mus_pahari
ENSGAGG00000012918	RPP40	99	70.556	MGP_SPRETEiJ_G0019309	Rpp40	99	70.556	Mus_spretus
ENSGAGG00000012918	RPP40	99	69.167	ENSMPUG00000000530	RPP40	93	69.167	Mustela_putorius_furo
ENSGAGG00000012918	RPP40	99	68.333	ENSMLUG00000000501	RPP40	99	68.333	Myotis_lucifugus
ENSGAGG00000012918	RPP40	99	71.111	ENSNGAG00000023955	-	99	71.111	Nannospalax_galili
ENSGAGG00000012918	RPP40	94	63.557	ENSNGAG00000022529	-	99	63.557	Nannospalax_galili
ENSGAGG00000012918	RPP40	88	37.152	ENSNBRG00000017465	rpp40	86	37.309	Neolamprologus_brichardi
ENSGAGG00000012918	RPP40	99	69.722	ENSNLEG00000034397	RPP40	99	69.722	Nomascus_leucogenys
ENSGAGG00000012918	RPP40	99	67.222	ENSMEUG00000005300	RPP40	99	67.222	Notamacropus_eugenii
ENSGAGG00000012918	RPP40	99	67.500	ENSODEG00000018153	-	99	67.500	Octodon_degus
ENSGAGG00000012918	RPP40	88	67.081	ENSODEG00000006170	-	100	67.081	Octodon_degus
ENSGAGG00000012918	RPP40	99	71.667	ENSODEG00000007255	-	99	71.667	Octodon_degus
ENSGAGG00000012918	RPP40	98	40.616	ENSONIG00000014016	rpp40	98	40.616	Oreochromis_niloticus
ENSGAGG00000012918	RPP40	83	75.987	ENSOANG00000001200	RPP40	100	75.987	Ornithorhynchus_anatinus
ENSGAGG00000012918	RPP40	98	63.966	ENSOCUG00000000354	RPP40	99	63.966	Oryctolagus_cuniculus
ENSGAGG00000012918	RPP40	99	39.167	ENSORLG00000008242	-	100	39.167	Oryzias_latipes
ENSGAGG00000012918	RPP40	99	39.227	ENSORLG00020013745	-	91	39.227	Oryzias_latipes_hni
ENSGAGG00000012918	RPP40	99	39.444	ENSORLG00015000887	-	100	39.444	Oryzias_latipes_hsok
ENSGAGG00000012918	RPP40	99	40.000	ENSOMEG00000002747	rpp40	100	40.000	Oryzias_melastigma
ENSGAGG00000012918	RPP40	99	70.556	ENSOGAG00000006055	RPP40	99	70.556	Otolemur_garnettii
ENSGAGG00000012918	RPP40	91	70.060	ENSOARG00000018783	RPP40	99	72.517	Ovis_aries
ENSGAGG00000012918	RPP40	99	69.722	ENSPPAG00000023703	RPP40	99	69.722	Pan_paniscus
ENSGAGG00000012918	RPP40	99	69.167	ENSPPRG00000005612	RPP40	99	69.167	Panthera_pardus
ENSGAGG00000012918	RPP40	99	64.444	ENSPTIG00000018847	RPP40	99	64.444	Panthera_tigris_altaica
ENSGAGG00000012918	RPP40	99	69.722	ENSPTRG00000017690	RPP40	99	69.722	Pan_troglodytes
ENSGAGG00000012918	RPP40	99	69.444	ENSPANG00000017865	RPP40	99	69.444	Papio_anubis
ENSGAGG00000012918	RPP40	98	52.514	ENSPKIG00000006311	rpp40	99	52.368	Paramormyrops_kingsleyae
ENSGAGG00000012918	RPP40	61	90.991	ENSPSIG00000007854	RPP40	100	90.991	Pelodiscus_sinensis
ENSGAGG00000012918	RPP40	93	61.128	ENSPEMG00000020809	Rpp40	91	61.128	Peromyscus_maniculatus_bairdii
ENSGAGG00000012918	RPP40	75	48.540	ENSPMAG00000008412	rpp40	99	48.540	Petromyzon_marinus
ENSGAGG00000012918	RPP40	99	73.889	ENSPCIG00000010682	RPP40	99	73.889	Phascolarctos_cinereus
ENSGAGG00000012918	RPP40	98	38.162	ENSPFOG00000011460	rpp40	98	38.162	Poecilia_formosa
ENSGAGG00000012918	RPP40	98	37.815	ENSPLAG00000001334	rpp40	99	37.815	Poecilia_latipinna
ENSGAGG00000012918	RPP40	98	38.655	ENSPMEG00000007721	rpp40	99	38.655	Poecilia_mexicana
ENSGAGG00000012918	RPP40	98	39.496	ENSPREG00000009215	rpp40	99	39.496	Poecilia_reticulata
ENSGAGG00000012918	RPP40	99	69.167	ENSPPYG00000016194	RPP40	99	69.167	Pongo_abelii
ENSGAGG00000012918	RPP40	50	66.298	ENSPCAG00000002700	-	97	66.298	Procavia_capensis
ENSGAGG00000012918	RPP40	99	70.556	ENSPCOG00000003907	RPP40	99	70.556	Propithecus_coquereli
ENSGAGG00000012918	RPP40	99	70.000	ENSPVAG00000011325	RPP40	99	70.000	Pteropus_vampyrus
ENSGAGG00000012918	RPP40	83	38.816	ENSPNYG00000004432	rpp40	99	38.816	Pundamilia_nyererei
ENSGAGG00000012918	RPP40	98	50.279	ENSPNAG00000019125	rpp40	99	50.279	Pygocentrus_nattereri
ENSGAGG00000012918	RPP40	99	68.611	ENSRNOG00000016226	Rpp40	99	70.199	Rattus_norvegicus
ENSGAGG00000012918	RPP40	99	69.444	ENSRBIG00000035800	RPP40	99	70.667	Rhinopithecus_bieti
ENSGAGG00000012918	RPP40	99	69.444	ENSRROG00000039116	RPP40	99	69.444	Rhinopithecus_roxellana
ENSGAGG00000012918	RPP40	99	68.333	ENSSBOG00000020297	RPP40	99	68.333	Saimiri_boliviensis_boliviensis
ENSGAGG00000012918	RPP40	76	74.460	ENSSHAG00000002102	RPP40	100	74.460	Sarcophilus_harrisii
ENSGAGG00000012918	RPP40	98	51.955	ENSSFOG00015001142	rpp40	80	51.955	Scleropages_formosus
ENSGAGG00000012918	RPP40	98	39.776	ENSSDUG00000007202	rpp40	99	39.776	Seriola_dumerili
ENSGAGG00000012918	RPP40	98	40.056	ENSSLDG00000017563	rpp40	99	40.056	Seriola_lalandi_dorsalis
ENSGAGG00000012918	RPP40	81	81.695	ENSSPUG00000018950	-	100	81.695	Sphenodon_punctatus
ENSGAGG00000012918	RPP40	100	85.989	ENSSPUG00000017487	-	100	85.989	Sphenodon_punctatus
ENSGAGG00000012918	RPP40	98	40.616	ENSSPAG00000022716	rpp40	99	40.616	Stegastes_partitus
ENSGAGG00000012918	RPP40	99	70.278	ENSSSCG00000000998	RPP40	99	71.761	Sus_scrofa
ENSGAGG00000012918	RPP40	98	81.844	ENSTGUG00000002258	-	100	81.844	Taeniopygia_guttata
ENSGAGG00000012918	RPP40	97	38.527	ENSTRUG00000003755	rpp40	98	38.527	Takifugu_rubripes
ENSGAGG00000012918	RPP40	99	38.333	ENSTNIG00000003077	rpp40	99	38.333	Tetraodon_nigroviridis
ENSGAGG00000012918	RPP40	69	51.200	ENSTBEG00000014467	-	73	51.200	Tupaia_belangeri
ENSGAGG00000012918	RPP40	98	66.480	ENSTTRG00000007319	RPP40	99	66.480	Tursiops_truncatus
ENSGAGG00000012918	RPP40	99	70.833	ENSUAMG00000002159	RPP40	99	72.185	Ursus_americanus
ENSGAGG00000012918	RPP40	99	70.833	ENSUMAG00000018639	RPP40	93	70.833	Ursus_maritimus
ENSGAGG00000012918	RPP40	80	49.829	ENSVPAG00000004652	-	99	49.829	Vicugna_pacos
ENSGAGG00000012918	RPP40	99	71.111	ENSVVUG00000005451	RPP40	99	71.111	Vulpes_vulpes
ENSGAGG00000012918	RPP40	99	58.726	ENSXETG00000017617	rpp40	99	58.726	Xenopus_tropicalis
ENSGAGG00000012918	RPP40	58	43.411	ENSXCOG00000019991	-	86	30.925	Xiphophorus_couchianus
ENSGAGG00000012918	RPP40	98	32.773	ENSXMAG00000024940	rpp40	98	32.773	Xiphophorus_maculatus