EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000013101 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 7941 bases
Position: chrPPEB01003932.1:125119-133059
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000017635	GCD14	PF08704.10	0.00033	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000020119	-	1242	-	ENSGAGP00000017635	249 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000013101's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000013101's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000013101	-	90	74.222	ENSGAGG00000020154	PCMT1	99	74.222

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000013101	-	92	73.246	ENSAPOG00000013007	pcmt	84	73.246	Acanthochromis_polyacanthus
ENSGAGG00000013101	-	90	74.222	ENSACIG00000023767	pcmt	84	74.222	Amphilophus_citrinellus
ENSGAGG00000013101	-	90	71.429	ENSACIG00000024027	pcmtl	99	71.429	Amphilophus_citrinellus
ENSGAGG00000013101	-	92	73.246	ENSAOCG00000002467	pcmt	84	73.246	Amphiprion_ocellaris
ENSGAGG00000013101	-	90	73.333	ENSAPEG00000005991	pcmt	84	73.333	Amphiprion_percula
ENSGAGG00000013101	-	90	73.333	ENSATEG00000020772	pcmt	99	73.333	Anabas_testudineus
ENSGAGG00000013101	-	90	71.749	ENSAPLG00000009762	PCMT1	98	71.749	Anas_platyrhynchos
ENSGAGG00000013101	-	91	87.773	ENSAPLG00000004765	-	99	87.773	Anas_platyrhynchos
ENSGAGG00000013101	-	90	73.778	ENSACAG00000006734	PCMT1	99	73.778	Anolis_carolinensis
ENSGAGG00000013101	-	91	90.749	ENSACAG00000013901	-	99	90.749	Anolis_carolinensis
ENSGAGG00000013101	-	92	73.684	ENSACLG00000027300	pcmt	99	70.667	Astatotilapia_calliptera
ENSGAGG00000013101	-	100	70.683	ENSAMXG00000033948	pcmtl	100	70.683	Astyanax_mexicanus
ENSGAGG00000013101	-	96	68.852	ENSAMXG00000036038	pcmt	99	69.643	Astyanax_mexicanus
ENSGAGG00000013101	-	96	70.000	ENSBTAG00000010204	PCMT1	82	75.429	Bos_taurus
ENSGAGG00000013101	-	91	53.540	WBGene00003954	pcm-1	100	53.540	Caenorhabditis_elegans
ENSGAGG00000013101	-	97	70.248	ENSCHIG00000025710	PCMT1	96	73.206	Capra_hircus
ENSGAGG00000013101	-	91	63.436	ENSCHOG00000009436	PCMT1	100	63.436	Choloepus_hoffmanni
ENSGAGG00000013101	-	91	73.451	ENSCPBG00000016587	PCMT1	86	69.919	Chrysemys_picta_bellii
ENSGAGG00000013101	-	100	98.394	ENSCPBG00000013417	-	100	98.394	Chrysemys_picta_bellii
ENSGAGG00000013101	-	92	73.246	ENSCSEG00000003382	pcmt	82	73.246	Cynoglossus_semilaevis
ENSGAGG00000013101	-	92	73.246	ENSCVAG00000021517	pcmt	84	73.246	Cyprinodon_variegatus
ENSGAGG00000013101	-	100	69.880	ENSCVAG00000010875	pcmtl	100	69.880	Cyprinodon_variegatus
ENSGAGG00000013101	-	100	68.675	ENSDARG00000042848	pcmtl	100	68.675	Danio_rerio
ENSGAGG00000013101	-	98	69.636	ENSDARG00000015201	pcmt	98	73.333	Danio_rerio
ENSGAGG00000013101	-	78	75.773	ENSDORG00000003137	Pcmt1	99	75.773	Dipodomys_ordii
ENSGAGG00000013101	-	78	72.680	ENSEBUG00000000561	PCMT1	99	72.680	Eptatretus_burgeri
ENSGAGG00000013101	-	98	72.840	ENSEASG00005008914	-	85	72.840	Equus_asinus_asinus
ENSGAGG00000013101	-	98	72.428	ENSECAG00000005292	PCMT1	84	72.428	Equus_caballus
ENSGAGG00000013101	-	92	72.368	ENSEEUG00000015095	PCMT1	100	72.368	Erinaceus_europaeus
ENSGAGG00000013101	-	92	73.684	ENSELUG00000019001	pcmt	85	73.684	Esox_lucius
ENSGAGG00000013101	-	100	69.880	ENSELUG00000016823	pcmtl	100	69.880	Esox_lucius
ENSGAGG00000013101	-	100	87.550	ENSFALG00000001118	-	100	87.550	Ficedula_albicollis
ENSGAGG00000013101	-	78	76.804	ENSFALG00000012172	PCMT1	99	76.804	Ficedula_albicollis
ENSGAGG00000013101	-	92	73.246	ENSFHEG00000016480	pcmt	84	73.333	Fundulus_heteroclitus
ENSGAGG00000013101	-	92	72.368	ENSGMOG00000017692	pcmt	100	72.368	Gadus_morhua
ENSGAGG00000013101	-	90	74.222	ENSGALG00000012388	PCMT1	98	75.238	Gallus_gallus
ENSGAGG00000013101	-	99	88.306	ENSGALG00000032988	PCMT1L	100	88.211	Gallus_gallus
ENSGAGG00000013101	-	92	73.246	ENSGAFG00000004794	pcmt	84	73.246	Gambusia_affinis
ENSGAGG00000013101	-	95	72.034	ENSGAFG00000003376	pcmtl	100	72.034	Gambusia_affinis
ENSGAGG00000013101	-	92	74.123	ENSHBUG00000010762	pcmt	99	71.111	Haplochromis_burtoni
ENSGAGG00000013101	-	90	72.889	ENSHCOG00000010431	pcmt	89	69.421	Hippocampus_comes
ENSGAGG00000013101	-	100	68.273	ENSIPUG00000020977	pimt	100	68.273	Ictalurus_punctatus
ENSGAGG00000013101	-	99	69.600	ENSIPUG00000009756	pcmt1	93	69.600	Ictalurus_punctatus
ENSGAGG00000013101	-	90	72.000	ENSJJAG00000023560	Pcmt1	99	72.000	Jaculus_jaculus
ENSGAGG00000013101	-	92	74.123	ENSKMAG00000022208	pcmt	84	74.123	Kryptolebias_marmoratus
ENSGAGG00000013101	-	100	66.667	ENSKMAG00000006639	pcmtl	100	66.667	Kryptolebias_marmoratus
ENSGAGG00000013101	-	92	72.807	ENSLBEG00000017170	pcmt	84	72.807	Labrus_bergylta
ENSGAGG00000013101	-	97	67.480	ENSLACG00000006397	PCMT1	94	71.831	Latimeria_chalumnae
ENSGAGG00000013101	-	98	70.850	ENSLOCG00000017009	pcmt	94	74.336	Lepisosteus_oculatus
ENSGAGG00000013101	-	90	73.333	ENSLAFG00000012417	PCMT1	99	73.333	Loxodonta_africana
ENSGAGG00000013101	-	92	73.684	ENSMAMG00000000917	pcmt	84	73.684	Mastacembelus_armatus
ENSGAGG00000013101	-	90	73.778	ENSMZEG00005004971	pcmt	99	70.667	Maylandia_zebra
ENSGAGG00000013101	-	90	70.667	ENSMGAG00000012636	PCMT1	100	74.762	Meleagris_gallopavo
ENSGAGG00000013101	-	90	91.556	ENSMGAG00000003062	-	99	91.556	Meleagris_gallopavo
ENSGAGG00000013101	-	88	73.182	ENSMMOG00000015402	pcmt	87	73.182	Mola_mola
ENSGAGG00000013101	-	90	72.321	ENSMMOG00000012018	pcmtl	93	72.321	Mola_mola
ENSGAGG00000013101	-	92	74.123	ENSMALG00000020956	pcmt	100	74.123	Monopterus_albus
ENSGAGG00000013101	-	90	74.222	ENSNBRG00000003034	pcmt	99	74.222	Neolamprologus_brichardi
ENSGAGG00000013101	-	92	74.123	ENSONIG00000005572	pcmt	84	74.123	Oreochromis_niloticus
ENSGAGG00000013101	-	94	71.967	ENSOANG00000001066	PCMT1	86	71.967	Ornithorhynchus_anatinus
ENSGAGG00000013101	-	92	72.368	ENSORLG00000017625	pcmt	85	72.368	Oryzias_latipes
ENSGAGG00000013101	-	91	72.566	ENSORLG00020018295	pcmt	84	72.566	Oryzias_latipes_hni
ENSGAGG00000013101	-	90	72.444	ENSORLG00015016675	pcmt	84	72.444	Oryzias_latipes_hsok
ENSGAGG00000013101	-	92	72.807	ENSOMEG00000021999	pcmt	84	72.807	Oryzias_melastigma
ENSGAGG00000013101	-	85	73.113	ENSOARG00000002890	PCMT1	100	73.113	Ovis_aries
ENSGAGG00000013101	-	95	69.492	ENSPKIG00000022992	pcmtl	95	69.492	Paramormyrops_kingsleyae
ENSGAGG00000013101	-	96	93.750	ENSPSIG00000012438	-	99	93.750	Pelodiscus_sinensis
ENSGAGG00000013101	-	78	75.773	ENSPSIG00000017327	PCMT1	99	75.773	Pelodiscus_sinensis
ENSGAGG00000013101	-	92	63.596	ENSPMGG00000013455	pcmt	84	63.596	Periophthalmus_magnuspinnatus
ENSGAGG00000013101	-	92	72.807	ENSPFOG00000015367	pcmt	84	72.807	Poecilia_formosa
ENSGAGG00000013101	-	92	72.807	ENSPLAG00000004032	pcmt	99	69.778	Poecilia_latipinna
ENSGAGG00000013101	-	92	72.807	ENSPMEG00000010356	pcmt	84	72.807	Poecilia_mexicana
ENSGAGG00000013101	-	98	70.204	ENSPREG00000016451	pcmtl	99	70.204	Poecilia_reticulata
ENSGAGG00000013101	-	90	69.778	ENSPREG00000015965	pcmt	99	69.778	Poecilia_reticulata
ENSGAGG00000013101	-	92	49.123	ENSPCAG00000003359	PCMT1	100	49.123	Procavia_capensis
ENSGAGG00000013101	-	90	73.778	ENSPNYG00000000882	pcmt	99	70.667	Pundamilia_nyererei
ENSGAGG00000013101	-	98	68.421	ENSPNAG00000002676	pcmt	92	68.421	Pygocentrus_nattereri
ENSGAGG00000013101	-	100	69.880	ENSPNAG00000005412	pcmtl	100	69.880	Pygocentrus_nattereri
ENSGAGG00000013101	-	65	75.155	ENSSHAG00000017541	PCMT1	99	75.155	Sarcophilus_harrisii
ENSGAGG00000013101	-	90	73.778	ENSSFOG00015020607	pcmt1	99	73.778	Scleropages_formosus
ENSGAGG00000013101	-	92	73.246	ENSSMAG00000003401	pcmt	84	73.246	Scophthalmus_maximus
ENSGAGG00000013101	-	92	73.246	ENSSDUG00000007397	pcmt	84	73.246	Seriola_dumerili
ENSGAGG00000013101	-	92	73.246	ENSSLDG00000020446	pcmt	84	73.246	Seriola_lalandi_dorsalis
ENSGAGG00000013101	-	65	73.913	ENSSLDG00000011313	-	96	73.913	Seriola_lalandi_dorsalis
ENSGAGG00000013101	-	90	72.889	ENSSPUG00000005816	PCMT1	99	72.889	Sphenodon_punctatus
ENSGAGG00000013101	-	90	73.778	ENSSPAG00000016434	pcmt	84	73.778	Stegastes_partitus
ENSGAGG00000013101	-	96	70.417	ENSSSCG00000004103	PCMT1	84	70.417	Sus_scrofa
ENSGAGG00000013101	-	90	92.000	ENSTGUG00000007336	-	100	92.000	Taeniopygia_guttata
ENSGAGG00000013101	-	78	76.804	ENSTGUG00000011332	PCMT1	100	76.804	Taeniopygia_guttata
ENSGAGG00000013101	-	100	65.863	ENSTRUG00000025102	pcmtl	100	65.863	Takifugu_rubripes
ENSGAGG00000013101	-	92	71.304	ENSTNIG00000019127	pcmt	100	71.304	Tetraodon_nigroviridis
ENSGAGG00000013101	-	99	75.203	ENSXETG00000015985	-	99	75.203	Xenopus_tropicalis
ENSGAGG00000013101	-	92	74.348	ENSXETG00000017500	pcmt1	100	78.571	Xenopus_tropicalis
ENSGAGG00000013101	-	98	68.980	ENSXCOG00000007525	pcmtl	99	68.980	Xiphophorus_couchianus
ENSGAGG00000013101	-	90	70.222	ENSXCOG00000018495	pcmt	99	70.222	Xiphophorus_couchianus
ENSGAGG00000013101	-	100	68.675	ENSXMAG00000013327	pcmtl	100	68.675	Xiphophorus_maculatus
ENSGAGG00000013101	-	90	73.333	ENSXMAG00000006249	pcmt	84	73.333	Xiphophorus_maculatus