EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000013176 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 63923 bases
Position: chrPPEB01002705.1:97695-161617
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000026236	ResIII	PF04851.15	8.9e-10	1	1
ENSGAGP00000025991	ResIII	PF04851.15	1.2e-08	1	1
ENSGAGP00000026232	ResIII	PF04851.15	1.2e-08	1	1
ENSGAGP00000026131	ResIII	PF04851.15	1.4e-08	1	1
ENSGAGP00000026060	ResIII	PF04851.15	1.5e-08	1	1
ENSGAGP00000026215	ResIII	PF04851.15	4e-08	1	1
ENSGAGP00000026185	ResIII	PF04851.15	6e-08	1	1
ENSGAGP00000026234	ResIII	PF04851.15	8.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000029831	-	3834	-	ENSGAGP00000026234	1277 (aa)	-	-
ENSGAGT00000029833	-	2529	-	ENSGAGP00000026236	842 (aa)	-	-
ENSGAGT00000029780	-	3975	-	ENSGAGP00000026185	1324 (aa)	-	-
ENSGAGT00000029562	-	4215	-	ENSGAGP00000025991	1404 (aa)	-	-
ENSGAGT00000029812	-	3975	-	ENSGAGP00000026215	1324 (aa)	-	-
ENSGAGT00000029829	-	3972	-	ENSGAGP00000026232	1323 (aa)	-	-
ENSGAGT00000029718	-	3999	-	ENSGAGP00000026131	1332 (aa)	-	-
ENSGAGT00000028967	-	5253	-	ENSGAGP00000025458	1750 (aa)	-	-
ENSGAGT00000028960	-	5325	-	ENSGAGP00000025451	1774 (aa)	-	-
ENSGAGT00000029636	-	4152	-	ENSGAGP00000026060	1383 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000013176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000013176's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000013176	-	54	32.389	ENSGAGG00000014089	RAD54L	64	32.863
ENSGAGG00000013176	-	67	43.158	ENSGAGG00000019882	SMARCA5	50	44.139
ENSGAGG00000013176	-	63	45.506	ENSGAGG00000014432	CHD1L	58	45.660
ENSGAGG00000013176	-	87	41.379	ENSGAGG00000001590	CHD5	62	41.818
ENSGAGG00000013176	-	85	42.159	ENSGAGG00000013164	CHD3	54	42.199
ENSGAGG00000013176	-	55	32.821	ENSGAGG00000018747	-	55	32.821
ENSGAGG00000013176	-	55	36.590	ENSGAGG00000008582	SMARCAD1	50	36.711
ENSGAGG00000013176	-	64	44.424	ENSGAGG00000023575	SMARCA1	54	44.485
ENSGAGG00000013176	-	67	35.781	ENSGAGG00000010269	HELLS	85	36.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000013176	-	95	97.753	ENSG00000173575	CHD2	100	97.143	Homo_sapiens
ENSGAGG00000013176	-	97	86.667	ENSAPOG00000008913	chd2	83	78.020	Acanthochromis_polyacanthus
ENSGAGG00000013176	-	98	92.005	ENSAMEG00000010805	-	79	90.298	Ailuropoda_melanoleuca
ENSGAGG00000013176	-	97	87.640	ENSAOCG00000016332	chd2	73	87.097	Amphiprion_ocellaris
ENSGAGG00000013176	-	96	87.640	ENSAPEG00000016676	chd2	82	78.938	Amphiprion_percula
ENSGAGG00000013176	-	98	82.604	ENSATEG00000005246	chd2	81	79.231	Anabas_testudineus
ENSGAGG00000013176	-	98	94.026	ENSAPLG00000011141	-	80	91.766	Anas_platyrhynchos
ENSGAGG00000013176	-	96	95.506	ENSACAG00000000088	-	71	94.681	Anolis_carolinensis
ENSGAGG00000013176	-	95	97.753	ENSANAG00000024017	-	81	90.393	Aotus_nancymaae
ENSGAGG00000013176	-	98	81.905	ENSACLG00000021370	chd2	83	78.768	Astatotilapia_calliptera
ENSGAGG00000013176	-	98	94.282	ENSBTAG00000017776	CHD2	98	94.161	Bos_taurus
ENSGAGG00000013176	-	95	97.753	ENSCJAG00000020444	-	80	90.393	Callithrix_jacchus
ENSGAGG00000013176	-	98	93.552	ENSCAFG00000010998	CHD2	79	91.481	Canis_familiaris
ENSGAGG00000013176	-	98	92.354	ENSCHIG00000022261	-	80	89.580	Capra_hircus
ENSGAGG00000013176	-	95	97.753	ENSTSYG00000003272	-	80	89.393	Carlito_syrichta
ENSGAGG00000013176	-	98	91.278	ENSCPOG00000005800	-	81	87.719	Cavia_porcellus
ENSGAGG00000013176	-	95	97.753	ENSCCAG00000035304	-	80	90.494	Cebus_capucinus
ENSGAGG00000013176	-	98	91.995	ENSCATG00000031069	-	79	90.494	Cercocebus_atys
ENSGAGG00000013176	-	95	96.629	ENSCLAG00000016269	-	79	89.671	Chinchilla_lanigera
ENSGAGG00000013176	-	98	91.995	ENSCSAG00000017007	-	79	90.494	Chlorocebus_sabaeus
ENSGAGG00000013176	-	90	89.717	ENSCHOG00000000608	-	67	91.818	Choloepus_hoffmanni
ENSGAGG00000013176	-	100	98.458	ENSCPBG00000018049	-	96	98.458	Chrysemys_picta_bellii
ENSGAGG00000013176	-	99	63.919	ENSCSAVG00000007580	-	92	60.283	Ciona_savignyi
ENSGAGG00000013176	-	98	91.995	ENSCANG00000038126	-	82	89.945	Colobus_angolensis_palliatus
ENSGAGG00000013176	-	96	97.753	ENSCGRG00001006649	Chd2	80	89.580	Cricetulus_griseus_chok1gshd
ENSGAGG00000013176	-	96	97.753	ENSCGRG00000018154	Chd2	80	89.580	Cricetulus_griseus_crigri
ENSGAGG00000013176	-	95	84.706	ENSCSEG00000003646	chd2	79	70.714	Cynoglossus_semilaevis
ENSGAGG00000013176	-	98	79.061	ENSCVAG00000002427	chd2	80	75.788	Cyprinodon_variegatus
ENSGAGG00000013176	-	99	82.792	ENSDARG00000060687	chd2	79	79.406	Danio_rerio
ENSGAGG00000013176	-	98	91.756	ENSDNOG00000009796	-	79	90.128	Dasypus_novemcinctus
ENSGAGG00000013176	-	78	79.967	ENSEBUG00000014994	chd2	84	73.677	Eptatretus_burgeri
ENSGAGG00000013176	-	99	93.863	ENSEASG00005015526	-	99	85.517	Equus_asinus_asinus
ENSGAGG00000013176	-	98	89.247	ENSELUG00000017981	chd2	83	79.420	Esox_lucius
ENSGAGG00000013176	-	95	97.647	ENSFALG00000010369	-	79	92.399	Ficedula_albicollis
ENSGAGG00000013176	-	95	96.629	ENSFDAG00000020651	-	79	89.945	Fukomys_damarensis
ENSGAGG00000013176	-	96	87.640	ENSFHEG00000002119	chd2	73	86.022	Fundulus_heteroclitus
ENSGAGG00000013176	-	87	90.909	ENSGMOG00000002890	chd2	66	90.909	Gadus_morhua
ENSGAGG00000013176	-	98	93.541	ENSGALG00000006949	CHD2	72	91.575	Gallus_gallus
ENSGAGG00000013176	-	98	82.130	ENSGAFG00000001905	chd2	81	76.051	Gambusia_affinis
ENSGAGG00000013176	-	99	79.669	ENSGACG00000013246	chd2	78	76.487	Gasterosteus_aculeatus
ENSGAGG00000013176	-	95	97.753	ENSGGOG00000015677	CHD2	81	88.950	Gorilla_gorilla
ENSGAGG00000013176	-	98	82.024	ENSHBUG00000017947	chd2	84	78.860	Haplochromis_burtoni
ENSGAGG00000013176	-	95	97.753	ENSHGLG00000004435	CHD2	80	89.214	Heterocephalus_glaber_female
ENSGAGG00000013176	-	95	97.753	ENSHGLG00100016376	-	80	88.391	Heterocephalus_glaber_male
ENSGAGG00000013176	-	95	84.270	ENSHCOG00000008855	chd2	71	83.871	Hippocampus_comes
ENSGAGG00000013176	-	97	86.667	ENSIPUG00000000488	chd2	83	77.302	Ictalurus_punctatus
ENSGAGG00000013176	-	95	97.753	ENSSTOG00000001270	-	79	90.494	Ictidomys_tridecemlineatus
ENSGAGG00000013176	-	98	91.637	ENSJJAG00000000213	Chd2	79	90.037	Jaculus_jaculus
ENSGAGG00000013176	-	90	82.239	ENSKMAG00000015849	chd2	91	78.122	Kryptolebias_marmoratus
ENSGAGG00000013176	-	98	93.431	ENSLAFG00000016885	-	95	93.552	Loxodonta_africana
ENSGAGG00000013176	-	95	97.753	ENSMFAG00000033343	-	79	90.494	Macaca_fascicularis
ENSGAGG00000013176	-	95	97.753	ENSMMUG00000011782	-	79	90.494	Macaca_mulatta
ENSGAGG00000013176	-	98	91.418	ENSMNEG00000036875	-	80	89.402	Macaca_nemestrina
ENSGAGG00000013176	-	98	91.995	ENSMLEG00000035026	-	80	89.837	Mandrillus_leucophaeus
ENSGAGG00000013176	-	98	83.514	ENSMAMG00000009082	chd2	82	78.611	Mastacembelus_armatus
ENSGAGG00000013176	-	98	81.905	ENSMZEG00005021333	chd2	83	78.768	Maylandia_zebra
ENSGAGG00000013176	-	95	96.471	ENSMGAG00000008966	-	73	91.400	Meleagris_gallopavo
ENSGAGG00000013176	-	95	97.753	ENSMICG00000000332	-	80	89.031	Microcebus_murinus
ENSGAGG00000013176	-	95	97.753	ENSMOCG00000015124	Chd2	80	89.762	Microtus_ochrogaster
ENSGAGG00000013176	-	98	93.182	ENSMODG00000013158	-	79	91.857	Monodelphis_domestica
ENSGAGG00000013176	-	95	86.047	ENSMALG00000007755	chd2	81	78.317	Monopterus_albus
ENSGAGG00000013176	-	95	97.753	MGP_CAROLIEiJ_G0029860	Chd2	80	89.854	Mus_caroli
ENSGAGG00000013176	-	95	97.753	ENSMUSG00000078671	Chd2	80	89.580	Mus_musculus
ENSGAGG00000013176	-	95	97.753	MGP_PahariEiJ_G0013082	Chd2	80	89.671	Mus_pahari
ENSGAGG00000013176	-	95	97.753	MGP_SPRETEiJ_G0030962	Chd2	80	89.580	Mus_spretus
ENSGAGG00000013176	-	98	92.115	ENSMPUG00000017577	-	79	90.494	Mustela_putorius_furo
ENSGAGG00000013176	-	98	91.310	ENSMLUG00000009292	-	79	89.800	Myotis_lucifugus
ENSGAGG00000013176	-	98	91.637	ENSNGAG00000010792	Chd2	79	90.402	Nannospalax_galili
ENSGAGG00000013176	-	98	81.538	ENSNBRG00000020591	chd2	82	78.225	Neolamprologus_brichardi
ENSGAGG00000013176	-	95	97.753	ENSNLEG00000012349	-	71	97.753	Nomascus_leucogenys
ENSGAGG00000013176	-	81	88.785	ENSMEUG00000001522	-	60	86.184	Notamacropus_eugenii
ENSGAGG00000013176	-	98	91.159	ENSODEG00000016028	-	80	88.848	Octodon_degus
ENSGAGG00000013176	-	98	81.538	ENSONIG00000015136	chd2	79	78.519	Oreochromis_niloticus
ENSGAGG00000013176	-	98	88.889	ENSOANG00000004385	-	93	88.889	Ornithorhynchus_anatinus
ENSGAGG00000013176	-	98	91.636	ENSOCUG00000001628	-	82	86.631	Oryctolagus_cuniculus
ENSGAGG00000013176	-	95	86.517	ENSORLG00000008403	chd2	80	78.022	Oryzias_latipes
ENSGAGG00000013176	-	95	86.517	ENSORLG00020004138	chd2	78	78.114	Oryzias_latipes_hni
ENSGAGG00000013176	-	98	78.313	ENSOMEG00000005831	chd2	76	75.663	Oryzias_melastigma
ENSGAGG00000013176	-	98	89.474	ENSOGAG00000010399	-	76	89.474	Otolemur_garnettii
ENSGAGG00000013176	-	98	92.473	ENSOARG00000010343	-	81	90.494	Ovis_aries
ENSGAGG00000013176	-	95	97.753	ENSPPAG00000030381	-	82	89.474	Pan_paniscus
ENSGAGG00000013176	-	95	97.753	ENSPTRG00000007478	CHD2	81	90.302	Pan_troglodytes
ENSGAGG00000013176	-	98	89.474	ENSPANG00000033355	-	76	89.474	Papio_anubis
ENSGAGG00000013176	-	97	86.207	ENSPKIG00000000495	chd2	82	78.962	Paramormyrops_kingsleyae
ENSGAGG00000013176	-	92	80.199	ENSPMGG00000009941	chd2	89	76.204	Periophthalmus_magnuspinnatus
ENSGAGG00000013176	-	95	97.753	ENSPEMG00000019507	Chd2	80	89.671	Peromyscus_maniculatus_bairdii
ENSGAGG00000013176	-	62	82.543	ENSPMAG00000003871	-	100	83.302	Petromyzon_marinus
ENSGAGG00000013176	-	98	94.884	ENSPCIG00000009417	-	99	88.302	Phascolarctos_cinereus
ENSGAGG00000013176	-	97	86.022	ENSPFOG00000007050	chd2	79	78.317	Poecilia_formosa
ENSGAGG00000013176	-	79	74.737	ENSPFOG00000000291	-	71	74.924	Poecilia_formosa
ENSGAGG00000013176	-	97	86.022	ENSPLAG00000005067	chd2	79	78.408	Poecilia_latipinna
ENSGAGG00000013176	-	97	86.022	ENSPMEG00000019628	chd2	81	78.408	Poecilia_mexicana
ENSGAGG00000013176	-	95	97.753	ENSPPYG00000006799	-	79	88.300	Pongo_abelii
ENSGAGG00000013176	-	95	97.753	ENSPCOG00000028084	-	79	90.311	Propithecus_coquereli
ENSGAGG00000013176	-	98	81.905	ENSPNYG00000010273	chd2	83	78.768	Pundamilia_nyererei
ENSGAGG00000013176	-	97	88.764	ENSPNAG00000016719	chd2	83	78.571	Pygocentrus_nattereri
ENSGAGG00000013176	-	98	91.398	ENSRNOG00000012716	Chd2	80	89.580	Rattus_norvegicus
ENSGAGG00000013176	-	98	91.995	ENSRBIG00000036875	-	83	87.807	Rhinopithecus_bieti
ENSGAGG00000013176	-	95	97.753	ENSRROG00000041087	-	80	90.494	Rhinopithecus_roxellana
ENSGAGG00000013176	-	95	97.753	ENSSBOG00000023754	-	81	90.393	Saimiri_boliviensis_boliviensis
ENSGAGG00000013176	-	95	100.000	ENSSHAG00000012513	-	79	92.132	Sarcophilus_harrisii
ENSGAGG00000013176	-	99	85.474	ENSSFOG00015023759	chd2	79	81.801	Scleropages_formosus
ENSGAGG00000013176	-	98	80.828	ENSSMAG00000001726	chd2	84	77.219	Scophthalmus_maximus
ENSGAGG00000013176	-	98	81.420	ENSSLDG00000001146	chd2	82	78.428	Seriola_lalandi_dorsalis
ENSGAGG00000013176	-	87	91.957	ENSSARG00000014112	-	60	91.957	Sorex_araneus
ENSGAGG00000013176	-	98	92.866	ENSSPUG00000011266	-	81	90.314	Sphenodon_punctatus
ENSGAGG00000013176	-	96	86.667	ENSSPAG00000016452	chd2	82	78.317	Stegastes_partitus
ENSGAGG00000013176	-	98	92.115	ENSSSCG00000002266	-	92	90.284	Sus_scrofa
ENSGAGG00000013176	-	95	97.647	ENSTGUG00000008540	-	80	92.399	Taeniopygia_guttata
ENSGAGG00000013176	-	98	77.284	ENSTRUG00000008842	chd2	66	84.906	Takifugu_rubripes
ENSGAGG00000013176	-	98	81.829	ENSTNIG00000010760	chd2	81	78.081	Tetraodon_nigroviridis
ENSGAGG00000013176	-	97	74.641	ENSTBEG00000017730	-	65	91.892	Tupaia_belangeri
ENSGAGG00000013176	-	98	92.234	ENSTTRG00000000430	-	71	97.849	Tursiops_truncatus
ENSGAGG00000013176	-	98	91.995	ENSUMAG00000000083	-	82	89.474	Ursus_maritimus
ENSGAGG00000013176	-	76	95.841	ENSVPAG00000009645	-	65	95.841	Vicugna_pacos
ENSGAGG00000013176	-	97	87.576	ENSXETG00000024129	chd2	85	83.902	Xenopus_tropicalis
ENSGAGG00000013176	-	98	82.241	ENSXCOG00000020255	chd2	83	78.657	Xiphophorus_couchianus
ENSGAGG00000013176	-	97	86.022	ENSXMAG00000002707	chd2	81	78.317	Xiphophorus_maculatus