EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000013535 (Gene tree)
Gene ID: -
Gene Symbol: SUB1
Alias: PC4|p14|p15
Full Name: SUB1 homolog%2C transcriptional regulator
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 11763 bases
Position: chrPPEB01005781.1:9604-21366
Accession: 19985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000018291	PC4	PF02229.16	2.6e-25	1	1
ENSGAGP00000018294	PC4	PF02229.16	2.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000020848	SUB1-202	524	-	ENSGAGP00000018294	126 (aa)	-	UPI0004F12C4F
ENSGAGT00000020844	SUB1-201	635	-	ENSGAGP00000018291	126 (aa)	-	UPI0004F12C4F

Gene Model

Click here to download ENSGAGG00000013535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000013535's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000013535	SUB1	84	56.075	ENSGAGG00000009110	-	94	56.075

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000013535	SUB1	100	90.551	ENSG00000113387	SUB1	100	90.551	Homo_sapiens
ENSGAGG00000013535	SUB1	100	73.016	ENSAPOG00000005917	SUB1	100	72.222	Acanthochromis_polyacanthus
ENSGAGG00000013535	SUB1	100	89.764	ENSAMEG00000006238	SUB1	95	89.764	Ailuropoda_melanoleuca
ENSGAGG00000013535	SUB1	100	75.397	ENSACIG00000015976	sub1b	100	74.603	Amphilophus_citrinellus
ENSGAGG00000013535	SUB1	91	76.522	ENSAOCG00000007313	-	83	81.373	Amphiprion_ocellaris
ENSGAGG00000013535	SUB1	85	74.766	ENSAOCG00000002323	-	75	80.220	Amphiprion_ocellaris
ENSGAGG00000013535	SUB1	100	76.190	ENSAPEG00000024347	sub1b	100	75.397	Amphiprion_percula
ENSGAGG00000013535	SUB1	52	73.846	ENSAPEG00000014618	-	62	73.846	Amphiprion_percula
ENSGAGG00000013535	SUB1	87	71.171	ENSAPEG00000017151	-	71	80.220	Amphiprion_percula
ENSGAGG00000013535	SUB1	100	73.810	ENSATEG00000010340	sub1b	100	73.016	Anabas_testudineus
ENSGAGG00000013535	SUB1	100	84.962	ENSACAG00000007974	SUB1	100	84.962	Anolis_carolinensis
ENSGAGG00000013535	SUB1	100	88.095	ENSANAG00000023392	-	83	88.095	Aotus_nancymaae
ENSGAGG00000013535	SUB1	100	90.551	ENSANAG00000011651	-	100	90.551	Aotus_nancymaae
ENSGAGG00000013535	SUB1	100	75.397	ENSACLG00000016875	sub1b	64	74.603	Astatotilapia_calliptera
ENSGAGG00000013535	SUB1	100	74.803	ENSAMXG00000037104	sub1b	100	74.016	Astyanax_mexicanus
ENSGAGG00000013535	SUB1	100	90.551	ENSBTAG00000021965	SUB1	100	90.551	Bos_taurus
ENSGAGG00000013535	SUB1	80	89.216	ENSCJAG00000018718	SUB1	98	89.216	Callithrix_jacchus
ENSGAGG00000013535	SUB1	90	82.456	ENSCAFG00000024488	-	86	86.111	Canis_familiaris
ENSGAGG00000013535	SUB1	100	87.402	ENSCAFG00000018879	-	88	89.764	Canis_familiaris
ENSGAGG00000013535	SUB1	100	89.764	ENSCAFG00000016713	-	96	89.764	Canis_familiaris
ENSGAGG00000013535	SUB1	100	89.062	ENSCAFG00020011479	-	77	89.062	Canis_lupus_dingo
ENSGAGG00000013535	SUB1	100	89.764	ENSCAFG00020016840	-	100	89.764	Canis_lupus_dingo
ENSGAGG00000013535	SUB1	100	90.551	ENSCHIG00000008460	SUB1	100	90.551	Capra_hircus
ENSGAGG00000013535	SUB1	100	80.769	ENSTSYG00000014069	-	93	83.846	Carlito_syrichta
ENSGAGG00000013535	SUB1	100	90.551	ENSTSYG00000029948	-	100	90.551	Carlito_syrichta
ENSGAGG00000013535	SUB1	100	79.528	ENSTSYG00000035366	-	83	79.528	Carlito_syrichta
ENSGAGG00000013535	SUB1	100	90.551	ENSCPOG00000031334	SUB1	100	90.551	Cavia_porcellus
ENSGAGG00000013535	SUB1	100	84.252	ENSCCAG00000033751	-	95	86.614	Cebus_capucinus
ENSGAGG00000013535	SUB1	100	81.746	ENSCCAG00000017043	-	93	81.746	Cebus_capucinus
ENSGAGG00000013535	SUB1	100	86.614	ENSCCAG00000020604	-	100	86.614	Cebus_capucinus
ENSGAGG00000013535	SUB1	100	90.551	ENSCCAG00000023605	-	100	90.551	Cebus_capucinus
ENSGAGG00000013535	SUB1	100	90.551	ENSCATG00000031199	SUB1	100	90.551	Cercocebus_atys
ENSGAGG00000013535	SUB1	100	89.844	ENSCLAG00000007522	SUB1	100	89.844	Chinchilla_lanigera
ENSGAGG00000013535	SUB1	100	90.551	ENSCSAG00000017172	-	100	90.551	Chlorocebus_sabaeus
ENSGAGG00000013535	SUB1	100	88.189	ENSCSAG00000019449	-	100	88.189	Chlorocebus_sabaeus
ENSGAGG00000013535	SUB1	100	98.413	ENSCPBG00000024218	SUB1	79	98.413	Chrysemys_picta_bellii
ENSGAGG00000013535	SUB1	100	90.551	ENSCANG00000029372	SUB1	100	90.551	Colobus_angolensis_palliatus
ENSGAGG00000013535	SUB1	100	74.603	ENSCANG00000028665	-	90	74.603	Colobus_angolensis_palliatus
ENSGAGG00000013535	SUB1	100	75.591	ENSCGRG00001014660	-	100	75.591	Cricetulus_griseus_chok1gshd
ENSGAGG00000013535	SUB1	100	70.866	ENSCGRG00001016254	-	100	70.866	Cricetulus_griseus_chok1gshd
ENSGAGG00000013535	SUB1	100	87.402	ENSCGRG00001003473	-	100	87.402	Cricetulus_griseus_chok1gshd
ENSGAGG00000013535	SUB1	100	87.402	ENSCGRG00000001133	-	100	87.402	Cricetulus_griseus_crigri
ENSGAGG00000013535	SUB1	100	74.016	ENSCGRG00000001489	-	100	74.016	Cricetulus_griseus_crigri
ENSGAGG00000013535	SUB1	100	75.591	ENSCGRG00000019368	-	100	75.591	Cricetulus_griseus_crigri
ENSGAGG00000013535	SUB1	99	76.000	ENSDARG00000053446	sub1a	100	77.778	Danio_rerio
ENSGAGG00000013535	SUB1	100	71.429	ENSDARG00000007720	sub1b	100	69.048	Danio_rerio
ENSGAGG00000013535	SUB1	100	87.402	ENSDNOG00000040794	-	100	87.402	Dasypus_novemcinctus
ENSGAGG00000013535	SUB1	100	85.827	ENSDNOG00000032396	-	100	85.827	Dasypus_novemcinctus
ENSGAGG00000013535	SUB1	100	88.976	ENSDORG00000013916	Sub1	100	88.976	Dipodomys_ordii
ENSGAGG00000013535	SUB1	79	53.465	ENSEBUG00000008746	sub1a	53	53.465	Eptatretus_burgeri
ENSGAGG00000013535	SUB1	100	90.551	ENSEASG00005007099	SUB1	100	90.551	Equus_asinus_asinus
ENSGAGG00000013535	SUB1	100	90.551	ENSECAG00000012399	SUB1	100	90.551	Equus_caballus
ENSGAGG00000013535	SUB1	79	87.129	ENSEEUG00000000436	SUB1	99	87.129	Erinaceus_europaeus
ENSGAGG00000013535	SUB1	100	89.764	ENSFCAG00000037288	SUB1	100	89.764	Felis_catus
ENSGAGG00000013535	SUB1	100	98.413	ENSFALG00000002143	SUB1	87	98.413	Ficedula_albicollis
ENSGAGG00000013535	SUB1	100	90.551	ENSFDAG00000017179	SUB1	100	90.551	Fukomys_damarensis
ENSGAGG00000013535	SUB1	100	95.238	ENSGALG00000034905	-	100	95.238	Gallus_gallus
ENSGAGG00000013535	SUB1	100	52.756	ENSGALG00000027147	-	100	53.543	Gallus_gallus
ENSGAGG00000013535	SUB1	100	99.206	ENSGALG00000003248	SUB1	100	99.206	Gallus_gallus
ENSGAGG00000013535	SUB1	100	73.016	ENSGACG00000003912	sub1b	100	72.222	Gasterosteus_aculeatus
ENSGAGG00000013535	SUB1	100	90.551	ENSGGOG00000040900	SUB1	100	90.551	Gorilla_gorilla
ENSGAGG00000013535	SUB1	82	80.583	ENSHBUG00000013953	sub1b	77	80.583	Haplochromis_burtoni
ENSGAGG00000013535	SUB1	100	90.551	ENSHGLG00000006749	SUB1	100	90.551	Heterocephalus_glaber_female
ENSGAGG00000013535	SUB1	100	90.551	ENSHGLG00100014344	SUB1	100	90.551	Heterocephalus_glaber_male
ENSGAGG00000013535	SUB1	100	70.635	ENSHCOG00000001809	sub1b	100	69.841	Hippocampus_comes
ENSGAGG00000013535	SUB1	100	74.603	ENSIPUG00000008166	sub1	100	72.222	Ictalurus_punctatus
ENSGAGG00000013535	SUB1	100	72.868	ENSIPUG00000024367	SUB1	100	72.093	Ictalurus_punctatus
ENSGAGG00000013535	SUB1	100	89.764	ENSSTOG00000019364	SUB1	100	89.764	Ictidomys_tridecemlineatus
ENSGAGG00000013535	SUB1	100	85.039	ENSJJAG00000018885	Sub1	100	85.039	Jaculus_jaculus
ENSGAGG00000013535	SUB1	99	74.400	ENSLBEG00000010728	sub1b	100	73.016	Labrus_bergylta
ENSGAGG00000013535	SUB1	52	93.846	ENSLACG00000001068	SUB1	100	93.846	Latimeria_chalumnae
ENSGAGG00000013535	SUB1	100	77.778	ENSLOCG00000006692	sub1b	100	76.984	Lepisosteus_oculatus
ENSGAGG00000013535	SUB1	100	89.764	ENSLAFG00000032088	-	100	90.551	Loxodonta_africana
ENSGAGG00000013535	SUB1	100	89.764	ENSLAFG00000011006	-	100	90.551	Loxodonta_africana
ENSGAGG00000013535	SUB1	100	90.551	ENSMFAG00000040728	SUB1	100	90.551	Macaca_fascicularis
ENSGAGG00000013535	SUB1	100	79.528	ENSMFAG00000045643	-	61	81.890	Macaca_fascicularis
ENSGAGG00000013535	SUB1	100	90.551	ENSMMUG00000046181	SUB1	100	90.551	Macaca_mulatta
ENSGAGG00000013535	SUB1	100	90.551	ENSMNEG00000037046	SUB1	100	90.551	Macaca_nemestrina
ENSGAGG00000013535	SUB1	100	85.827	ENSMLEG00000030509	-	94	88.189	Mandrillus_leucophaeus
ENSGAGG00000013535	SUB1	100	90.551	ENSMLEG00000037017	-	100	90.551	Mandrillus_leucophaeus
ENSGAGG00000013535	SUB1	100	73.810	ENSMLEG00000043436	-	90	73.810	Mandrillus_leucophaeus
ENSGAGG00000013535	SUB1	100	73.810	ENSMAMG00000018428	sub1b	100	73.016	Mastacembelus_armatus
ENSGAGG00000013535	SUB1	100	75.397	ENSMZEG00005021252	sub1b	100	74.603	Maylandia_zebra
ENSGAGG00000013535	SUB1	100	51.969	ENSMGAG00000001200	-	95	51.969	Meleagris_gallopavo
ENSGAGG00000013535	SUB1	100	99.206	ENSMGAG00000002906	SUB1	100	99.206	Meleagris_gallopavo
ENSGAGG00000013535	SUB1	100	87.402	ENSMAUG00000020232	Sub1	100	87.402	Mesocricetus_auratus
ENSGAGG00000013535	SUB1	100	90.551	ENSMICG00000014535	SUB1	100	90.551	Microcebus_murinus
ENSGAGG00000013535	SUB1	100	77.165	ENSMOCG00000016424	-	100	77.165	Microtus_ochrogaster
ENSGAGG00000013535	SUB1	100	86.614	ENSMOCG00000018930	-	100	86.614	Microtus_ochrogaster
ENSGAGG00000013535	SUB1	100	82.734	ENSMODG00000020410	SUB1	100	82.734	Monodelphis_domestica
ENSGAGG00000013535	SUB1	100	76.984	ENSMALG00000007163	sub1b	81	80.952	Monopterus_albus
ENSGAGG00000013535	SUB1	100	87.402	MGP_CAROLIEiJ_G0019676	Sub1	100	87.402	Mus_caroli
ENSGAGG00000013535	SUB1	100	86.614	ENSMUSG00000022205	Sub1	100	86.614	Mus_musculus
ENSGAGG00000013535	SUB1	100	86.614	MGP_PahariEiJ_G0016056	Sub1	100	86.614	Mus_pahari
ENSGAGG00000013535	SUB1	100	86.614	MGP_SPRETEiJ_G0020573	Sub1	100	86.614	Mus_spretus
ENSGAGG00000013535	SUB1	100	88.976	ENSMPUG00000018418	-	100	88.976	Mustela_putorius_furo
ENSGAGG00000013535	SUB1	100	89.764	ENSMPUG00000015185	-	100	89.764	Mustela_putorius_furo
ENSGAGG00000013535	SUB1	100	85.039	ENSMLUG00000009236	-	95	85.039	Myotis_lucifugus
ENSGAGG00000013535	SUB1	100	90.551	ENSMLUG00000013685	-	95	90.551	Myotis_lucifugus
ENSGAGG00000013535	SUB1	100	84.127	ENSNGAG00000010782	-	84	84.127	Nannospalax_galili
ENSGAGG00000013535	SUB1	100	88.189	ENSNGAG00000014072	-	100	88.189	Nannospalax_galili
ENSGAGG00000013535	SUB1	100	76.190	ENSNGAG00000017212	-	100	76.190	Nannospalax_galili
ENSGAGG00000013535	SUB1	82	79.612	ENSNBRG00000008451	sub1b	84	79.612	Neolamprologus_brichardi
ENSGAGG00000013535	SUB1	100	89.764	ENSNLEG00000036068	SUB1	100	89.764	Nomascus_leucogenys
ENSGAGG00000013535	SUB1	100	89.764	ENSNLEG00000018383	-	95	90.551	Nomascus_leucogenys
ENSGAGG00000013535	SUB1	100	85.714	ENSNLEG00000035968	-	100	85.714	Nomascus_leucogenys
ENSGAGG00000013535	SUB1	100	91.270	ENSMEUG00000007770	SUB1	100	91.270	Notamacropus_eugenii
ENSGAGG00000013535	SUB1	100	88.976	ENSOPRG00000012887	SUB1	100	88.976	Ochotona_princeps
ENSGAGG00000013535	SUB1	100	90.551	ENSODEG00000001937	-	100	90.551	Octodon_degus
ENSGAGG00000013535	SUB1	100	84.252	ENSODEG00000014558	-	84	85.039	Octodon_degus
ENSGAGG00000013535	SUB1	85	87.037	ENSODEG00000015114	-	98	86.885	Octodon_degus
ENSGAGG00000013535	SUB1	100	94.444	ENSOANG00000002328	SUB1	95	94.444	Ornithorhynchus_anatinus
ENSGAGG00000013535	SUB1	100	85.039	ENSOCUG00000006262	SUB1	60	87.402	Oryctolagus_cuniculus
ENSGAGG00000013535	SUB1	98	89.516	ENSOGAG00000000337	-	100	89.516	Otolemur_garnettii
ENSGAGG00000013535	SUB1	100	90.551	ENSOGAG00000009012	-	100	90.551	Otolemur_garnettii
ENSGAGG00000013535	SUB1	100	90.551	ENSOARG00000012154	SUB1	100	90.551	Ovis_aries
ENSGAGG00000013535	SUB1	100	90.551	ENSPPAG00000011212	SUB1	100	90.551	Pan_paniscus
ENSGAGG00000013535	SUB1	100	89.764	ENSPPRG00000008557	SUB1	100	89.764	Panthera_pardus
ENSGAGG00000013535	SUB1	100	89.764	ENSPTIG00000009466	SUB1	100	89.764	Panthera_tigris_altaica
ENSGAGG00000013535	SUB1	100	90.551	ENSPTRG00000048895	SUB1	100	90.551	Pan_troglodytes
ENSGAGG00000013535	SUB1	100	84.252	ENSPTRG00000041644	-	100	85.039	Pan_troglodytes
ENSGAGG00000013535	SUB1	100	90.551	ENSPANG00000002644	-	95	90.551	Papio_anubis
ENSGAGG00000013535	SUB1	100	90.551	ENSPANG00000000339	-	97	90.551	Papio_anubis
ENSGAGG00000013535	SUB1	100	73.810	ENSPANG00000033272	-	90	73.810	Papio_anubis
ENSGAGG00000013535	SUB1	100	88.189	ENSPANG00000000672	-	91	88.189	Papio_anubis
ENSGAGG00000013535	SUB1	100	86.614	ENSPANG00000035601	-	100	86.614	Papio_anubis
ENSGAGG00000013535	SUB1	100	75.397	ENSPKIG00000016923	sub1b	100	74.603	Paramormyrops_kingsleyae
ENSGAGG00000013535	SUB1	100	97.619	ENSPSIG00000005731	SUB1	95	97.619	Pelodiscus_sinensis
ENSGAGG00000013535	SUB1	100	82.540	ENSPCIG00000020827	-	100	83.333	Phascolarctos_cinereus
ENSGAGG00000013535	SUB1	100	91.270	ENSPCIG00000020907	-	100	91.270	Phascolarctos_cinereus
ENSGAGG00000013535	SUB1	100	90.551	ENSPPYG00000015379	SUB1	100	90.551	Pongo_abelii
ENSGAGG00000013535	SUB1	100	86.614	ENSPPYG00000018347	-	100	87.402	Pongo_abelii
ENSGAGG00000013535	SUB1	100	90.551	ENSPCOG00000014391	SUB1	100	90.551	Propithecus_coquereli
ENSGAGG00000013535	SUB1	100	89.764	ENSPVAG00000004785	SUB1	100	89.764	Pteropus_vampyrus
ENSGAGG00000013535	SUB1	100	75.397	ENSPNYG00000010975	sub1b	100	74.603	Pundamilia_nyererei
ENSGAGG00000013535	SUB1	99	75.200	ENSPNAG00000005998	sub1b	99	74.400	Pygocentrus_nattereri
ENSGAGG00000013535	SUB1	100	73.228	ENSPNAG00000008693	sub1a	100	74.803	Pygocentrus_nattereri
ENSGAGG00000013535	SUB1	100	88.189	ENSRNOG00000050563	Sub1	100	88.189	Rattus_norvegicus
ENSGAGG00000013535	SUB1	100	84.252	ENSRBIG00000031233	SUB1	100	84.252	Rhinopithecus_bieti
ENSGAGG00000013535	SUB1	100	90.551	ENSRROG00000040438	SUB1	100	90.551	Rhinopithecus_roxellana
ENSGAGG00000013535	SUB1	100	80.159	ENSRROG00000042718	-	90	80.159	Rhinopithecus_roxellana
ENSGAGG00000013535	SUB1	100	90.551	ENSSBOG00000026994	SUB1	100	90.551	Saimiri_boliviensis_boliviensis
ENSGAGG00000013535	SUB1	100	91.270	ENSSHAG00000014986	SUB1	100	91.270	Sarcophilus_harrisii
ENSGAGG00000013535	SUB1	100	75.397	ENSSFOG00015017283	sub1b	100	73.016	Scleropages_formosus
ENSGAGG00000013535	SUB1	100	77.953	ENSSFOG00015018386	sub1b	100	77.953	Scleropages_formosus
ENSGAGG00000013535	SUB1	100	72.222	ENSSMAG00000000313	sub1b	100	71.429	Scophthalmus_maximus
ENSGAGG00000013535	SUB1	100	74.603	ENSSDUG00000013854	sub1b	76	78.571	Seriola_dumerili
ENSGAGG00000013535	SUB1	100	74.603	ENSSLDG00000000852	sub1b	100	73.810	Seriola_lalandi_dorsalis
ENSGAGG00000013535	SUB1	100	97.619	ENSSPUG00000016817	SUB1	100	97.619	Sphenodon_punctatus
ENSGAGG00000013535	SUB1	100	74.603	ENSSPAG00000019363	sub1b	100	73.810	Stegastes_partitus
ENSGAGG00000013535	SUB1	100	88.189	ENSSSCG00000040294	-	87	90.551	Sus_scrofa
ENSGAGG00000013535	SUB1	100	90.551	ENSSSCG00000032650	-	100	90.551	Sus_scrofa
ENSGAGG00000013535	SUB1	100	96.825	ENSTGUG00000001918	SUB1	100	96.825	Taeniopygia_guttata
ENSGAGG00000013535	SUB1	100	71.429	ENSTRUG00000024420	sub1b	100	73.016	Takifugu_rubripes
ENSGAGG00000013535	SUB1	100	72.222	ENSTNIG00000002700	sub1b	100	71.429	Tetraodon_nigroviridis
ENSGAGG00000013535	SUB1	100	82.677	ENSTBEG00000012861	-	100	85.039	Tupaia_belangeri
ENSGAGG00000013535	SUB1	99	83.333	ENSTBEG00000015821	-	100	83.333	Tupaia_belangeri
ENSGAGG00000013535	SUB1	100	88.976	ENSTBEG00000006504	-	100	88.976	Tupaia_belangeri
ENSGAGG00000013535	SUB1	100	88.976	ENSTBEG00000004053	-	100	88.976	Tupaia_belangeri
ENSGAGG00000013535	SUB1	100	85.039	ENSTBEG00000001790	-	100	85.039	Tupaia_belangeri
ENSGAGG00000013535	SUB1	100	84.252	ENSTBEG00000011247	-	99	84.252	Tupaia_belangeri
ENSGAGG00000013535	SUB1	80	90.196	ENSTTRG00000017324	SUB1	99	90.196	Tursiops_truncatus
ENSGAGG00000013535	SUB1	100	89.764	ENSUAMG00000000182	SUB1	100	89.764	Ursus_americanus
ENSGAGG00000013535	SUB1	100	89.764	ENSUMAG00000013792	SUB1	100	89.764	Ursus_maritimus
ENSGAGG00000013535	SUB1	100	80.952	ENSVPAG00000011012	SUB1	100	80.952	Vicugna_pacos
ENSGAGG00000013535	SUB1	100	89.764	ENSVVUG00000022166	-	100	89.764	Vulpes_vulpes
ENSGAGG00000013535	SUB1	87	83.636	ENSVVUG00000025193	-	95	81.416	Vulpes_vulpes
ENSGAGG00000013535	SUB1	100	84.375	ENSXETG00000027218	sub1	100	84.375	Xenopus_tropicalis