EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000013544 (Gene tree)
Gene ID: -
Gene Symbol: ZFR
Alias: SPG71|ZFR1
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 49330 bases
Position: chrPPEB01005781.1:35580-84909
Accession: 17277
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000018300	DZF	PF07528.14	5.9e-60	1	1
ENSGAGP00000018308	DZF	PF07528.14	7.7e-48	1	1
ENSGAGP00000018308	zf-met	PF12874.7	2.1e-21	1	3
ENSGAGP00000018308	zf-met	PF12874.7	2.1e-21	2	3
ENSGAGP00000018308	zf-met	PF12874.7	2.1e-21	3	3
ENSGAGP00000018300	zf-met	PF12874.7	2.5e-21	1	3
ENSGAGP00000018300	zf-met	PF12874.7	2.5e-21	2	3
ENSGAGP00000018300	zf-met	PF12874.7	2.5e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000020855	ZFR-201	3551	-	ENSGAGP00000018300	1028 (aa)	-	-
ENSGAGT00000020863	ZFR-202	3207	-	ENSGAGP00000018308	967 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000013544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000013544's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000013544	ZFR	97	56.576	ENSGAGG00000024120	ZFR2	94	55.512

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000013544	ZFR	99	91.569	ENSG00000056097	ZFR	98	91.620	Homo_sapiens
ENSGAGG00000013544	ZFR	99	72.211	ENSAPOG00000009740	zfr	94	72.152	Acanthochromis_polyacanthus
ENSGAGG00000013544	ZFR	99	91.667	ENSAMEG00000006184	ZFR	95	91.373	Ailuropoda_melanoleuca
ENSGAGG00000013544	ZFR	92	86.957	ENSACIG00000015926	zfr	94	76.957	Amphilophus_citrinellus
ENSGAGG00000013544	ZFR	99	74.419	ENSAOCG00000013876	zfr	94	74.903	Amphiprion_ocellaris
ENSGAGG00000013544	ZFR	99	77.713	ENSAPEG00000024383	zfr	95	77.907	Amphiprion_percula
ENSGAGG00000013544	ZFR	99	77.259	ENSATEG00000010271	zfr	94	77.551	Anabas_testudineus
ENSGAGG00000013544	ZFR	86	90.048	ENSAPLG00000015627	-	100	90.048	Anas_platyrhynchos
ENSGAGG00000013544	ZFR	99	89.401	ENSACAG00000007880	ZFR	95	89.194	Anolis_carolinensis
ENSGAGG00000013544	ZFR	99	91.471	ENSANAG00000023333	ZFR	95	91.176	Aotus_nancymaae
ENSGAGG00000013544	ZFR	92	86.957	ENSACLG00000016832	zfr	94	76.957	Astatotilapia_calliptera
ENSGAGG00000013544	ZFR	98	78.624	ENSAMXG00000019511	zfr	94	79.643	Astyanax_mexicanus
ENSGAGG00000013544	ZFR	99	91.569	ENSBTAG00000008414	ZFR	98	90.909	Bos_taurus
ENSGAGG00000013544	ZFR	99	91.471	ENSCJAG00000018740	ZFR	95	91.176	Callithrix_jacchus
ENSGAGG00000013544	ZFR	97	92.324	ENSCAFG00000018886	ZFR	100	91.582	Canis_familiaris
ENSGAGG00000013544	ZFR	99	91.667	ENSCAFG00020016859	-	95	91.373	Canis_lupus_dingo
ENSGAGG00000013544	ZFR	99	91.667	ENSCHIG00000007710	ZFR	95	91.373	Capra_hircus
ENSGAGG00000013544	ZFR	98	91.949	ENSTSYG00000010670	ZFR	94	90.964	Carlito_syrichta
ENSGAGG00000013544	ZFR	98	72.122	ENSCAPG00000015655	ZFR	93	66.245	Cavia_aperea
ENSGAGG00000013544	ZFR	97	83.015	ENSCPOG00000000862	ZFR	94	84.789	Cavia_porcellus
ENSGAGG00000013544	ZFR	99	91.373	ENSCCAG00000024473	ZFR	95	91.078	Cebus_capucinus
ENSGAGG00000013544	ZFR	99	91.373	ENSCATG00000038311	ZFR	95	91.078	Cercocebus_atys
ENSGAGG00000013544	ZFR	98	91.323	ENSCLAG00000007408	ZFR	94	90.965	Chinchilla_lanigera
ENSGAGG00000013544	ZFR	99	91.373	ENSCSAG00000017180	ZFR	95	91.078	Chlorocebus_sabaeus
ENSGAGG00000013544	ZFR	90	81.208	ENSCHOG00000003848	ZFR	94	70.984	Choloepus_hoffmanni
ENSGAGG00000013544	ZFR	99	99.408	ENSCPBG00000024211	ZFR	95	99.408	Chrysemys_picta_bellii
ENSGAGG00000013544	ZFR	99	91.373	ENSCANG00000017807	ZFR	95	91.078	Colobus_angolensis_palliatus
ENSGAGG00000013544	ZFR	99	90.980	ENSCGRG00001016009	Zfr	95	90.784	Cricetulus_griseus_chok1gshd
ENSGAGG00000013544	ZFR	98	91.005	ENSCGRG00000001228	Zfr	93	89.889	Cricetulus_griseus_crigri
ENSGAGG00000013544	ZFR	99	74.566	ENSCSEG00000011169	ZFR	94	75.313	Cynoglossus_semilaevis
ENSGAGG00000013544	ZFR	92	78.804	ENSCSEG00000009224	zfr	94	75.862	Cynoglossus_semilaevis
ENSGAGG00000013544	ZFR	98	74.082	ENSCVAG00000016494	zfr	94	73.100	Cyprinodon_variegatus
ENSGAGG00000013544	ZFR	99	78.634	ENSDARG00000027109	zfr	95	79.707	Danio_rerio
ENSGAGG00000013544	ZFR	99	91.292	ENSDNOG00000008852	ZFR	95	90.998	Dasypus_novemcinctus
ENSGAGG00000013544	ZFR	99	90.481	ENSDORG00000016643	Zfr	95	90.677	Dipodomys_ordii
ENSGAGG00000013544	ZFR	99	86.516	ENSETEG00000008937	ZFR	95	86.220	Echinops_telfairi
ENSGAGG00000013544	ZFR	50	57.460	ENSEBUG00000012503	-	84	60.543	Eptatretus_burgeri
ENSGAGG00000013544	ZFR	99	91.667	ENSEASG00005007104	ZFR	95	91.471	Equus_asinus_asinus
ENSGAGG00000013544	ZFR	86	91.627	ENSECAG00000012851	ZFR	99	90.950	Equus_caballus
ENSGAGG00000013544	ZFR	99	80.059	ENSEEUG00000014206	ZFR	87	93.925	Erinaceus_europaeus
ENSGAGG00000013544	ZFR	99	69.193	ENSELUG00000022743	zfr	93	67.555	Esox_lucius
ENSGAGG00000013544	ZFR	99	91.765	ENSFCAG00000000354	ZFR	95	91.471	Felis_catus
ENSGAGG00000013544	ZFR	99	93.491	ENSFALG00000002149	ZFR	94	93.491	Ficedula_albicollis
ENSGAGG00000013544	ZFR	98	91.005	ENSFDAG00000012993	ZFR	95	90.467	Fukomys_damarensis
ENSGAGG00000013544	ZFR	50	73.372	ENSFHEG00000012064	zfr	96	67.807	Fundulus_heteroclitus
ENSGAGG00000013544	ZFR	93	89.333	ENSGMOG00000003967	zfr	88	89.855	Gadus_morhua
ENSGAGG00000013544	ZFR	99	95.661	ENSGALG00000003235	-	95	95.661	Gallus_gallus
ENSGAGG00000013544	ZFR	99	93.393	ENSGALG00000034488	-	95	92.801	Gallus_gallus
ENSGAGG00000013544	ZFR	99	60.649	ENSGAFG00000016229	zfr	94	58.869	Gambusia_affinis
ENSGAGG00000013544	ZFR	99	74.071	ENSGACG00000005045	zfr	95	73.403	Gasterosteus_aculeatus
ENSGAGG00000013544	ZFR	99	91.373	ENSGGOG00000016302	ZFR	95	91.078	Gorilla_gorilla
ENSGAGG00000013544	ZFR	99	90.686	ENSHGLG00000008088	ZFR	95	90.392	Heterocephalus_glaber_female
ENSGAGG00000013544	ZFR	98	90.784	ENSHGLG00100016776	ZFR	93	90.452	Heterocephalus_glaber_male
ENSGAGG00000013544	ZFR	99	76.528	ENSHCOG00000001548	zfr	94	77.132	Hippocampus_comes
ENSGAGG00000013544	ZFR	99	79.417	ENSIPUG00000008192	zfr	95	78.958	Ictalurus_punctatus
ENSGAGG00000013544	ZFR	99	91.232	ENSSTOG00000008742	ZFR	95	90.936	Ictidomys_tridecemlineatus
ENSGAGG00000013544	ZFR	98	87.117	ENSJJAG00000023064	Zfr	93	85.872	Jaculus_jaculus
ENSGAGG00000013544	ZFR	97	75.052	ENSKMAG00000009468	zfr	99	77.565	Kryptolebias_marmoratus
ENSGAGG00000013544	ZFR	99	75.432	ENSLBEG00000010783	zfr	94	76.998	Labrus_bergylta
ENSGAGG00000013544	ZFR	99	78.092	ENSLACG00000000831	ZFR	95	79.552	Latimeria_chalumnae
ENSGAGG00000013544	ZFR	99	79.886	ENSLOCG00000006727	zfr	95	80.171	Lepisosteus_oculatus
ENSGAGG00000013544	ZFR	98	91.429	ENSLAFG00000002308	ZFR	94	89.980	Loxodonta_africana
ENSGAGG00000013544	ZFR	98	91.631	ENSMFAG00000042691	ZFR	95	90.098	Macaca_fascicularis
ENSGAGG00000013544	ZFR	99	91.373	ENSMMUG00000001317	ZFR	95	91.078	Macaca_mulatta
ENSGAGG00000013544	ZFR	99	91.373	ENSMNEG00000029441	ZFR	95	91.078	Macaca_nemestrina
ENSGAGG00000013544	ZFR	98	91.631	ENSMLEG00000028503	ZFR	94	91.095	Mandrillus_leucophaeus
ENSGAGG00000013544	ZFR	99	76.112	ENSMAMG00000017351	zfr	94	76.596	Mastacembelus_armatus
ENSGAGG00000013544	ZFR	92	86.957	ENSMZEG00005021243	zfr	94	76.957	Maylandia_zebra
ENSGAGG00000013544	ZFR	98	80.781	ENSMGAG00000002841	ZFR	94	81.084	Meleagris_gallopavo
ENSGAGG00000013544	ZFR	99	90.588	ENSMAUG00000000976	Zfr	95	90.392	Mesocricetus_auratus
ENSGAGG00000013544	ZFR	99	91.471	ENSMICG00000001244	ZFR	95	91.176	Microcebus_murinus
ENSGAGG00000013544	ZFR	99	90.882	ENSMOCG00000018630	Zfr	95	90.686	Microtus_ochrogaster
ENSGAGG00000013544	ZFR	99	72.949	ENSMMOG00000012585	zfr	84	76.180	Mola_mola
ENSGAGG00000013544	ZFR	99	92.542	ENSMODG00000020412	ZFR	95	92.542	Monodelphis_domestica
ENSGAGG00000013544	ZFR	99	72.407	ENSMALG00000007123	zfr	89	94.118	Monopterus_albus
ENSGAGG00000013544	ZFR	99	90.882	MGP_CAROLIEiJ_G0019681	Zfr	96	91.986	Mus_caroli
ENSGAGG00000013544	ZFR	99	90.784	ENSMUSG00000022201	Zfr	100	97.151	Mus_musculus
ENSGAGG00000013544	ZFR	99	90.784	MGP_PahariEiJ_G0016057	Zfr	96	91.638	Mus_pahari
ENSGAGG00000013544	ZFR	99	90.882	MGP_SPRETEiJ_G0020574	Zfr	96	91.986	Mus_spretus
ENSGAGG00000013544	ZFR	77	90.983	ENSMPUG00000015193	-	99	90.139	Mustela_putorius_furo
ENSGAGG00000013544	ZFR	98	91.746	ENSMLUG00000011797	ZFR	94	91.402	Myotis_lucifugus
ENSGAGG00000013544	ZFR	99	91.275	ENSNGAG00000018328	Zfr	95	90.980	Nannospalax_galili
ENSGAGG00000013544	ZFR	92	86.957	ENSNBRG00000008378	zfr	94	76.957	Neolamprologus_brichardi
ENSGAGG00000013544	ZFR	98	91.525	ENSNLEG00000014098	ZFR	94	90.993	Nomascus_leucogenys
ENSGAGG00000013544	ZFR	97	85.563	ENSMEUG00000010225	ZFR	94	85.714	Notamacropus_eugenii
ENSGAGG00000013544	ZFR	81	95.312	ENSOPRG00000016756	ZFR	79	95.312	Ochotona_princeps
ENSGAGG00000013544	ZFR	97	91.295	ENSODEG00000001990	ZFR	94	91.161	Octodon_degus
ENSGAGG00000013544	ZFR	98	93.220	ENSOANG00000014434	ZFR	93	92.821	Ornithorhynchus_anatinus
ENSGAGG00000013544	ZFR	99	91.373	ENSOCUG00000016737	ZFR	95	91.078	Oryctolagus_cuniculus
ENSGAGG00000013544	ZFR	99	76.817	ENSORLG00000017243	zfr	95	76.424	Oryzias_latipes
ENSGAGG00000013544	ZFR	99	76.728	ENSORLG00020014823	zfr	95	76.019	Oryzias_latipes_hni
ENSGAGG00000013544	ZFR	99	76.728	ENSORLG00015005801	zfr	95	76.093	Oryzias_latipes_hsok
ENSGAGG00000013544	ZFR	99	76.871	ENSOMEG00000003336	zfr	95	76.579	Oryzias_melastigma
ENSGAGG00000013544	ZFR	99	89.401	ENSOGAG00000015117	ZFR	94	89.107	Otolemur_garnettii
ENSGAGG00000013544	ZFR	98	90.265	ENSOARG00000012233	ZFR	94	90.788	Ovis_aries
ENSGAGG00000013544	ZFR	98	91.631	ENSPPAG00000027447	ZFR	94	90.984	Pan_paniscus
ENSGAGG00000013544	ZFR	99	91.765	ENSPPRG00000008253	ZFR	95	91.471	Panthera_pardus
ENSGAGG00000013544	ZFR	98	91.852	ENSPTIG00000010038	ZFR	94	88.791	Panthera_tigris_altaica
ENSGAGG00000013544	ZFR	99	91.471	ENSPTRG00000016771	ZFR	95	91.176	Pan_troglodytes
ENSGAGG00000013544	ZFR	99	90.625	ENSPANG00000003729	ZFR	95	89.754	Papio_anubis
ENSGAGG00000013544	ZFR	92	85.870	ENSPKIG00000016781	ZFR	94	79.377	Paramormyrops_kingsleyae
ENSGAGG00000013544	ZFR	99	70.968	ENSPKIG00000007596	ZFR	95	70.409	Paramormyrops_kingsleyae
ENSGAGG00000013544	ZFR	92	78.619	ENSPMGG00000015984	zfr	94	76.837	Periophthalmus_magnuspinnatus
ENSGAGG00000013544	ZFR	99	90.891	ENSPEMG00000014573	Zfr	97	90.695	Peromyscus_maniculatus_bairdii
ENSGAGG00000013544	ZFR	99	92.542	ENSPCIG00000020906	ZFR	95	92.542	Phascolarctos_cinereus
ENSGAGG00000013544	ZFR	99	75.220	ENSPFOG00000005931	zfr	95	75.122	Poecilia_formosa
ENSGAGG00000013544	ZFR	99	75.636	ENSPREG00000011947	zfr	95	75.832	Poecilia_reticulata
ENSGAGG00000013544	ZFR	98	91.419	ENSPPYG00000015378	ZFR	94	90.890	Pongo_abelii
ENSGAGG00000013544	ZFR	99	82.451	ENSPCAG00000007277	ZFR	95	82.157	Procavia_capensis
ENSGAGG00000013544	ZFR	99	91.577	ENSPCOG00000000045	ZFR	99	91.283	Propithecus_coquereli
ENSGAGG00000013544	ZFR	91	93.750	ENSPVAG00000004780	ZFR	89	92.727	Pteropus_vampyrus
ENSGAGG00000013544	ZFR	92	86.957	ENSPNYG00000006239	zfr	94	76.957	Pundamilia_nyererei
ENSGAGG00000013544	ZFR	92	90.217	ENSPNAG00000025151	zfr	95	81.518	Pygocentrus_nattereri
ENSGAGG00000013544	ZFR	99	90.490	ENSRNOG00000011627	Zfr	95	90.294	Rattus_norvegicus
ENSGAGG00000013544	ZFR	99	91.275	ENSRBIG00000041561	ZFR	95	90.980	Rhinopithecus_bieti
ENSGAGG00000013544	ZFR	99	91.275	ENSRROG00000044008	ZFR	95	90.980	Rhinopithecus_roxellana
ENSGAGG00000013544	ZFR	98	91.130	ENSSBOG00000024150	ZFR	94	91.068	Saimiri_boliviensis_boliviensis
ENSGAGG00000013544	ZFR	98	92.903	ENSSHAG00000015478	ZFR	94	92.718	Sarcophilus_harrisii
ENSGAGG00000013544	ZFR	99	74.588	ENSSFOG00015017300	ZFR	94	73.909	Scleropages_formosus
ENSGAGG00000013544	ZFR	99	76.301	ENSSMAG00000000320	zfr	95	77.071	Scophthalmus_maximus
ENSGAGG00000013544	ZFR	99	77.810	ENSSDUG00000013882	zfr	95	77.907	Seriola_dumerili
ENSGAGG00000013544	ZFR	75	75.737	ENSSLDG00000000762	zfr	94	70.446	Seriola_lalandi_dorsalis
ENSGAGG00000013544	ZFR	90	94.891	ENSSARG00000006571	ZFR	88	95.732	Sorex_araneus
ENSGAGG00000013544	ZFR	97	93.849	ENSSPUG00000016786	ZFR	94	94.045	Sphenodon_punctatus
ENSGAGG00000013544	ZFR	99	77.541	ENSSPAG00000019293	zfr	95	77.928	Stegastes_partitus
ENSGAGG00000013544	ZFR	99	91.667	ENSSSCG00000027681	ZFR	99	90.611	Sus_scrofa
ENSGAGG00000013544	ZFR	97	94.883	ENSTGUG00000001909	ZFR	95	94.356	Taeniopygia_guttata
ENSGAGG00000013544	ZFR	99	77.220	ENSTRUG00000016620	zfr	94	77.648	Takifugu_rubripes
ENSGAGG00000013544	ZFR	51	72.538	ENSTNIG00000018856	zfr	86	70.833	Tetraodon_nigroviridis
ENSGAGG00000013544	ZFR	99	71.863	ENSTBEG00000017687	ZFR	95	71.471	Tupaia_belangeri
ENSGAGG00000013544	ZFR	97	89.820	ENSTTRG00000017321	ZFR	95	86.569	Tursiops_truncatus
ENSGAGG00000013544	ZFR	86	91.388	ENSUAMG00000000172	-	99	91.029	Ursus_americanus
ENSGAGG00000013544	ZFR	86	91.388	ENSUMAG00000013805	-	99	91.029	Ursus_maritimus
ENSGAGG00000013544	ZFR	97	91.941	ENSVPAG00000011011	ZFR	95	88.529	Vicugna_pacos
ENSGAGG00000013544	ZFR	99	91.765	ENSVVUG00000022171	-	95	91.471	Vulpes_vulpes
ENSGAGG00000013544	ZFR	99	78.818	ENSXETG00000015598	zfr	94	79.901	Xenopus_tropicalis
ENSGAGG00000013544	ZFR	99	74.759	ENSXCOG00000009361	zfr	95	74.416	Xiphophorus_couchianus
ENSGAGG00000013544	ZFR	99	75.364	ENSXMAG00000013356	zfr	95	74.369	Xiphophorus_maculatus