EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSGAGG00000013611 (Gene tree)
Gene ID
-
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Gopherus_agassizii
Status
putative
Strand
Plus strand
Length
47717 bases
Position
chrPPEB01002602.1:22529-70245
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAGP00000018386tRNA_anti-codonPF01336.255.7e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAGT00000020954RPA1-2012797-ENSGAGP00000018386616 (aa)--
Gene Model
Click here to download ENSGAGG00000013611's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000013611's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAGG00000013611RPA19860.494ENSAPOG00000019409RPA19360.494Acanthochromis_polyacanthus
ENSGAGG00000013611RPA19961.866ENSAPOG00000011658rpa19961.866Acanthochromis_polyacanthus
ENSGAGG00000013611RPA19977.087ENSAMEG00000007706RPA19977.087Ailuropoda_melanoleuca
ENSGAGG00000013611RPA19557.922ENSACIG00000007277rpa19957.922Amphilophus_citrinellus
ENSGAGG00000013611RPA19557.895ENSACIG00000012881RPA19957.895Amphilophus_citrinellus
ENSGAGG00000013611RPA19963.192ENSAOCG00000023376rpa110062.931Amphiprion_ocellaris
ENSGAGG00000013611RPA19954.923ENSAOCG00000009003RPA19955.077Amphiprion_ocellaris
ENSGAGG00000013611RPA19953.534ENSAPEG00000019132RPA19953.684Amphiprion_percula
ENSGAGG00000013611RPA19963.355ENSAPEG00000008634rpa19963.448Amphiprion_percula
ENSGAGG00000013611RPA19955.368ENSATEG00000006443RPA19955.368Anabas_testudineus
ENSGAGG00000013611RPA19563.808ENSATEG00000022024rpa110063.808Anabas_testudineus
ENSGAGG00000013611RPA19785.856ENSAPLG00000012442RPA110066.372Anas_platyrhynchos
ENSGAGG00000013611RPA19966.774ENSACAG00000014490RPA19967.581Anolis_carolinensis
ENSGAGG00000013611RPA19776.539ENSANAG00000023456RPA19976.539Aotus_nancymaae
ENSGAGG00000013611RPA19957.098ENSACLG00000005223RPA19957.098Astatotilapia_calliptera
ENSGAGG00000013611RPA19364.747ENSACLG00000006640rpa19964.747Astatotilapia_calliptera
ENSGAGG00000013611RPA19961.726ENSAMXG00000008418rpa110061.889Astyanax_mexicanus
ENSGAGG00000013611RPA19977.073ENSBTAG00000009711RPA19977.073Bos_taurus
ENSGAGG00000013611RPA19975.570ENSCJAG00000001848RPA19976.221Callithrix_jacchus
ENSGAGG00000013611RPA19977.886ENSCAFG00000019249RPA19977.886Canis_familiaris
ENSGAGG00000013611RPA19977.886ENSCAFG00020009847RPA19977.886Canis_lupus_dingo
ENSGAGG00000013611RPA19976.873ENSCHIG00000026308RPA19977.561Capra_hircus
ENSGAGG00000013611RPA19977.922ENSTSYG00000003482-9977.922Carlito_syrichta
ENSGAGG00000013611RPA19975.896ENSCPOG00000000035RPA19975.896Cavia_porcellus
ENSGAGG00000013611RPA19962.561ENSCCAG00000010981RPA19963.209Cebus_capucinus
ENSGAGG00000013611RPA19973.127ENSCLAG00000015045-9973.127Chinchilla_lanigera
ENSGAGG00000013611RPA19977.199ENSCLAG00000005185-9977.199Chinchilla_lanigera
ENSGAGG00000013611RPA19962.237ENSCSAG00000013833RPA19962.885Chlorocebus_sabaeus
ENSGAGG00000013611RPA19575.639ENSCHOG00000013540-9975.639Choloepus_hoffmanni
ENSGAGG00000013611RPA17181.735ENSCHOG00000009454-9981.735Choloepus_hoffmanni
ENSGAGG00000013611RPA110098.539ENSCPBG00000020377RPA110098.776Chrysemys_picta_bellii
ENSGAGG00000013611RPA19942.020ENSCING00000023482-9942.020Ciona_intestinalis
ENSGAGG00000013611RPA19874.419ENSCANG00000030911RPA19974.419Colobus_angolensis_palliatus
ENSGAGG00000013611RPA19977.832ENSCGRG00001008197Rpa19977.832Cricetulus_griseus_chok1gshd
ENSGAGG00000013611RPA18178.501ENSCGRG00000000582Rpa19978.501Cricetulus_griseus_crigri
ENSGAGG00000013611RPA19960.586ENSCSEG00000013066rpa19960.586Cynoglossus_semilaevis
ENSGAGG00000013611RPA19952.524ENSCSEG00000012726RPA19853.820Cynoglossus_semilaevis
ENSGAGG00000013611RPA19963.622ENSCVAG00000019431rpa19963.796Cyprinodon_variegatus
ENSGAGG00000013611RPA19651.156ENSCVAG00000013446-9651.156Cyprinodon_variegatus
ENSGAGG00000013611RPA19961.238ENSDARG00000003938rpa110061.238Danio_rerio
ENSGAGG00000013611RPA19877.961ENSDNOG00000017218RPA19977.961Dasypus_novemcinctus
ENSGAGG00000013611RPA19977.724ENSDORG00000006199Rpa19977.724Dipodomys_ordii
ENSGAGG00000013611RPA19941.883FBgn0010173RpA-709842.419Drosophila_melanogaster
ENSGAGG00000013611RPA18280.412ENSETEG00000017608RPA18280.412Echinops_telfairi
ENSGAGG00000013611RPA19878.347ENSEASG00005009372RPA19878.347Equus_asinus_asinus
ENSGAGG00000013611RPA19978.699ENSECAG00000023886RPA19978.699Equus_caballus
ENSGAGG00000013611RPA16880.144ENSEEUG00000002186-6880.144Erinaceus_europaeus
ENSGAGG00000013611RPA19962.175ENSELUG00000021071rpa19962.175Esox_lucius
ENSGAGG00000013611RPA18857.431ENSELUG00000006136RPA19957.431Esox_lucius
ENSGAGG00000013611RPA19977.023ENSFCAG00000006306RPA110077.023Felis_catus
ENSGAGG00000013611RPA110085.299ENSFALG00000006575RPA110085.299Ficedula_albicollis
ENSGAGG00000013611RPA19976.710ENSFDAG00000007720RPA19976.710Fukomys_damarensis
ENSGAGG00000013611RPA19862.211ENSFHEG00000003580rpa19962.211Fundulus_heteroclitus
ENSGAGG00000013611RPA19959.804ENSGMOG00000010382rpa110059.804Gadus_morhua
ENSGAGG00000013611RPA110085.089ENSGALG00000003072RPA110085.089Gallus_gallus
ENSGAGG00000013611RPA19862.768ENSGAFG00000012916rpa19962.768Gambusia_affinis
ENSGAGG00000013611RPA19954.394ENSGAFG00000020953RPA19954.766Gambusia_affinis
ENSGAGG00000013611RPA19961.601ENSGACG00000010856rpa19961.601Gasterosteus_aculeatus
ENSGAGG00000013611RPA19974.430ENSGGOG00000014186RPA19974.430Gorilla_gorilla
ENSGAGG00000013611RPA19964.368ENSHBUG00000017773rpa19964.368Haplochromis_burtoni
ENSGAGG00000013611RPA19652.685ENSHBUG00000009348RPA19952.685Haplochromis_burtoni
ENSGAGG00000013611RPA19976.547ENSHGLG00000008846RPA110077.199Heterocephalus_glaber_female
ENSGAGG00000013611RPA19976.547ENSHGLG00100017755-10077.199Heterocephalus_glaber_male
ENSGAGG00000013611RPA19972.683ENSHGLG00100000799-9972.683Heterocephalus_glaber_male
ENSGAGG00000013611RPA19965.366ENSHGLG00100002005-9966.016Heterocephalus_glaber_male
ENSGAGG00000013611RPA19959.508ENSHCOG00000001401rpa19959.641Hippocampus_comes
ENSGAGG00000013611RPA19943.800ENSHCOG00000000351RPA19943.800Hippocampus_comes
ENSGAGG00000013611RPA19961.075ENSIPUG00000004400rpa19961.075Ictalurus_punctatus
ENSGAGG00000013611RPA19871.875ENSSTOG00000022475RPA19871.875Ictidomys_tridecemlineatus
ENSGAGG00000013611RPA19577.342ENSJJAG00000000876Rpa19877.342Jaculus_jaculus
ENSGAGG00000013611RPA19861.765ENSKMAG00000005605rpa19961.039Kryptolebias_marmoratus
ENSGAGG00000013611RPA19954.647ENSKMAG00000000234RPA19954.647Kryptolebias_marmoratus
ENSGAGG00000013611RPA19965.455ENSLBEG00000002281RPA18765.455Labrus_bergylta
ENSGAGG00000013611RPA19962.745ENSLBEG00000021604rpa19962.745Labrus_bergylta
ENSGAGG00000013611RPA18168.862ENSLACG00000007210RPA19968.862Latimeria_chalumnae
ENSGAGG00000013611RPA19966.340ENSLOCG00000006397rpa19966.340Lepisosteus_oculatus
ENSGAGG00000013611RPA19975.484ENSLAFG00000015354RPA19975.484Loxodonta_africana
ENSGAGG00000013611RPA18275.099ENSMFAG00000036138-10075.889Macaca_fascicularis
ENSGAGG00000013611RPA19875.954ENSMMUG00000011604-9976.617Macaca_mulatta
ENSGAGG00000013611RPA19970.033ENSMMUG00000002442-9970.033Macaca_mulatta
ENSGAGG00000013611RPA19963.740ENSMNEG00000029837-9963.740Macaca_nemestrina
ENSGAGG00000013611RPA19974.062ENSMNEG00000031632-9974.715Macaca_nemestrina
ENSGAGG00000013611RPA19770.695ENSMLEG00000038768-9971.358Mandrillus_leucophaeus
ENSGAGG00000013611RPA19962.029ENSMAMG00000017993rpa19962.029Mastacembelus_armatus
ENSGAGG00000013611RPA19263.426ENSMAMG00000020097RPA18862.277Mastacembelus_armatus
ENSGAGG00000013611RPA19964.696ENSMZEG00005007551rpa19964.696Maylandia_zebra
ENSGAGG00000013611RPA19957.098ENSMZEG00005024731RPA19957.098Maylandia_zebra
ENSGAGG00000013611RPA19984.365ENSMGAG00000005315RPA19984.365Meleagris_gallopavo
ENSGAGG00000013611RPA19777.500ENSMAUG00000010474Rpa19978.000Mesocricetus_auratus
ENSGAGG00000013611RPA19976.911ENSMICG00000012867RPA19976.911Microcebus_murinus
ENSGAGG00000013611RPA19976.835ENSMOCG00000013019Rpa19976.835Microtus_ochrogaster
ENSGAGG00000013611RPA19961.111ENSMMOG00000014292rpa19962.395Mola_mola
ENSGAGG00000013611RPA19855.281ENSMMOG00000010868RPA19861.024Mola_mola
ENSGAGG00000013611RPA19980.357ENSMODG00000010549RPA19980.357Monodelphis_domestica
ENSGAGG00000013611RPA19963.399ENSMALG00000011453rpa19963.399Monopterus_albus
ENSGAGG00000013611RPA19763.532ENSMALG00000001208RPA18263.532Monopterus_albus
ENSGAGG00000013611RPA19976.461MGP_CAROLIEiJ_G0016734Rpa19976.461Mus_caroli
ENSGAGG00000013611RPA19975.241ENSMUSG00000000751Rpa19975.241Mus_musculus
ENSGAGG00000013611RPA19976.575MGP_PahariEiJ_G0017871Rpa19976.575Mus_pahari
ENSGAGG00000013611RPA19975.120MGP_SPRETEiJ_G0017577Rpa19975.120Mus_spretus
ENSGAGG00000013611RPA19978.084ENSMPUG00000013119RPA19978.084Mustela_putorius_furo
ENSGAGG00000013611RPA19975.606ENSMLUG00000006113RPA19975.606Myotis_lucifugus
ENSGAGG00000013611RPA19976.105ENSNGAG00000004522Rpa19676.105Nannospalax_galili
ENSGAGG00000013611RPA19855.941ENSNBRG00000009672RPA19755.941Neolamprologus_brichardi
ENSGAGG00000013611RPA19464.533ENSNBRG00000020595rpa19964.533Neolamprologus_brichardi
ENSGAGG00000013611RPA19976.260ENSNLEG00000017149RPA19977.073Nomascus_leucogenys
ENSGAGG00000013611RPA19768.667ENSMEUG00000006714RPA19968.667Notamacropus_eugenii
ENSGAGG00000013611RPA19575.966ENSODEG00000009038RPA19675.966Octodon_degus
ENSGAGG00000013611RPA19963.857ENSONIG00000013135rpa19963.857Oreochromis_niloticus
ENSGAGG00000013611RPA19880.000ENSOANG00000010880RPA19980.000Ornithorhynchus_anatinus
ENSGAGG00000013611RPA19975.466ENSOCUG00000001504RPA19975.466Oryctolagus_cuniculus
ENSGAGG00000013611RPA19954.268ENSORLG00000003368RPA19954.268Oryzias_latipes
ENSGAGG00000013611RPA19962.131ENSORLG00000004856rpa19962.131Oryzias_latipes
ENSGAGG00000013611RPA19962.131ENSORLG00020008980rpa19962.131Oryzias_latipes_hni
ENSGAGG00000013611RPA19952.844ENSORLG00020015284RPA19952.844Oryzias_latipes_hni
ENSGAGG00000013611RPA16962.736ENSORLG00015005867-9762.736Oryzias_latipes_hsok
ENSGAGG00000013611RPA19954.503ENSORLG00015020383RPA19954.503Oryzias_latipes_hsok
ENSGAGG00000013611RPA19962.131ENSORLG00015013982rpa19962.131Oryzias_latipes_hsok
ENSGAGG00000013611RPA19961.375ENSOMEG00000004704rpa19961.375Oryzias_melastigma
ENSGAGG00000013611RPA19456.803ENSOMEG00000011040RPA19956.803Oryzias_melastigma
ENSGAGG00000013611RPA19471.930ENSOGAG00000029379-9971.930Otolemur_garnettii
ENSGAGG00000013611RPA19976.423ENSOGAG00000005581-9976.423Otolemur_garnettii
ENSGAGG00000013611RPA19976.873ENSOARG00000014479RPA19977.561Ovis_aries
ENSGAGG00000013611RPA19976.098ENSPPAG00000039680RPA19976.911Pan_paniscus
ENSGAGG00000013611RPA19977.184ENSPPRG00000011807RPA110077.184Panthera_pardus
ENSGAGG00000013611RPA19976.861ENSPTIG00000007898RPA110076.861Panthera_tigris_altaica
ENSGAGG00000013611RPA19976.098ENSPTRG00000008539RPA19976.911Pan_troglodytes
ENSGAGG00000013611RPA19976.059ENSPANG00000024592RPA19976.710Papio_anubis
ENSGAGG00000013611RPA19461.790ENSPKIG00000008053rpa19462.222Paramormyrops_kingsleyae
ENSGAGG00000013611RPA19894.030ENSPSIG00000015617RPA110094.030Pelodiscus_sinensis
ENSGAGG00000013611RPA19954.854ENSPMGG00000000543RPA19957.699Periophthalmus_magnuspinnatus
ENSGAGG00000013611RPA19960.920ENSPMGG00000011589rpa19961.084Periophthalmus_magnuspinnatus
ENSGAGG00000013611RPA19977.162ENSPEMG00000021061Rpa19977.162Peromyscus_maniculatus_bairdii
ENSGAGG00000013611RPA19979.187ENSPCIG00000019049RPA19979.512Phascolarctos_cinereus
ENSGAGG00000013611RPA19963.218ENSPFOG00000003987rpa19963.218Poecilia_formosa
ENSGAGG00000013611RPA19454.400ENSPLAG00000008844-9754.400Poecilia_latipinna
ENSGAGG00000013611RPA19963.279ENSPLAG00000004984rpa19963.279Poecilia_latipinna
ENSGAGG00000013611RPA19963.218ENSPMEG00000020602rpa19963.218Poecilia_mexicana
ENSGAGG00000013611RPA19454.032ENSPMEG00000003627-9754.647Poecilia_mexicana
ENSGAGG00000013611RPA19455.345ENSPREG00000010174rpa19655.345Poecilia_reticulata
ENSGAGG00000013611RPA19952.959ENSPREG00000010119RPA110052.403Poecilia_reticulata
ENSGAGG00000013611RPA19977.073ENSPCOG00000001799RPA19977.073Propithecus_coquereli
ENSGAGG00000013611RPA19977.398ENSPVAG00000002149RPA19977.398Pteropus_vampyrus
ENSGAGG00000013611RPA19964.532ENSPNYG00000016316rpa19964.696Pundamilia_nyererei
ENSGAGG00000013611RPA19956.786ENSPNYG00000024165RPA19956.786Pundamilia_nyererei
ENSGAGG00000013611RPA19952.903ENSPNAG00000008599rpa110053.291Pygocentrus_nattereri
ENSGAGG00000013611RPA19784.058ENSRNOG00000003123Rpa19978.467Rattus_norvegicus
ENSGAGG00000013611RPA19976.547ENSRBIG00000036587RPA19976.547Rhinopithecus_bieti
ENSGAGG00000013611RPA19971.173ENSRROG00000043278RPA19971.173Rhinopithecus_roxellana
ENSGAGG00000013611RPA19932.222YAR007CRFA19932.222Saccharomyces_cerevisiae
ENSGAGG00000013611RPA19772.712ENSSBOG00000030233RPA19973.378Saimiri_boliviensis_boliviensis
ENSGAGG00000013611RPA19879.836ENSSHAG00000007969RPA19880.328Sarcophilus_harrisii
ENSGAGG00000013611RPA19963.844ENSSFOG00015005362rpa19263.844Scleropages_formosus
ENSGAGG00000013611RPA19952.310ENSSMAG00000019746RPA19952.861Scophthalmus_maximus
ENSGAGG00000013611RPA19963.011ENSSDUG00000011949rpa19963.011Seriola_dumerili
ENSGAGG00000013611RPA19952.778ENSSDUG00000016358RPA19953.304Seriola_dumerili
ENSGAGG00000013611RPA19952.339ENSSLDG00000020784RPA18466.895Seriola_lalandi_dorsalis
ENSGAGG00000013611RPA19963.175ENSSLDG00000011806rpa19963.175Seriola_lalandi_dorsalis
ENSGAGG00000013611RPA18778.125ENSSARG00000007506RPA18978.125Sorex_araneus
ENSGAGG00000013611RPA19883.914ENSSPUG00000007223RPA110083.914Sphenodon_punctatus
ENSGAGG00000013611RPA19962.520ENSSPAG00000009903rpa19962.520Stegastes_partitus
ENSGAGG00000013611RPA19857.213ENSSPAG00000011165RPA19857.213Stegastes_partitus
ENSGAGG00000013611RPA19975.693ENSSSCG00000017822RPA19978.239Sus_scrofa
ENSGAGG00000013611RPA110085.413ENSTGUG00000005775RPA110085.413Taeniopygia_guttata
ENSGAGG00000013611RPA19964.754ENSTRUG00000003616rpa19964.754Takifugu_rubripes
ENSGAGG00000013611RPA19956.597ENSTRUG00000000405RPA19757.225Takifugu_rubripes
ENSGAGG00000013611RPA19965.090ENSTNIG00000016199rpa19965.090Tetraodon_nigroviridis
ENSGAGG00000013611RPA18775.510ENSTBEG00000002709RPA18875.510Tupaia_belangeri
ENSGAGG00000013611RPA19976.823ENSTTRG00000001169RPA110077.544Tursiops_truncatus
ENSGAGG00000013611RPA18884.615ENSUAMG00000015676RPA19784.615Ursus_americanus
ENSGAGG00000013611RPA19978.374ENSUMAG00000009328RPA19978.374Ursus_maritimus
ENSGAGG00000013611RPA19976.020ENSVPAG00000009443RPA19976.020Vicugna_pacos
ENSGAGG00000013611RPA19977.561ENSVVUG00000021715RPA19977.561Vulpes_vulpes
ENSGAGG00000013611RPA19973.443ENSXETG00000013538rpa19973.443Xenopus_tropicalis
ENSGAGG00000013611RPA19557.363ENSXCOG00000009899-9957.363Xiphophorus_couchianus
ENSGAGG00000013611RPA19360.105ENSXCOG00000010068rpa19460.971Xiphophorus_couchianus
ENSGAGG00000013611RPA19962.131ENSXMAG00000004102rpa19962.917Xiphophorus_maculatus
ENSGAGG00000013611RPA19165.000ENSXMAG00000010333RPA18365.000Xiphophorus_maculatus

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