EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000013765 (Gene tree)
Gene ID: -
Gene Symbol: PRPF3
Alias: Prp3|RP18|SNRNP90|hPrp3
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 24183 bases
Position: chrPPEB01005793.1:41223-65405
Accession: 17348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000018603	PRP3	PF08572.10	7.8e-80	1	1
ENSGAGP00000018599	PRP3	PF08572.10	1.3e-79	1	1
ENSGAGP00000018599	PWI	PF01480.17	3.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000021209	PRPF3-202	2714	-	ENSGAGP00000018603	549 (aa)	-	-
ENSGAGT00000021205	PRPF3-201	3530	-	ENSGAGP00000018599	703 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000013765's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000013765's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000013765	PRPF3	100	95.811	ENSG00000117360	PRPF3	100	96.053	Homo_sapiens
ENSGAGG00000013765	PRPF3	100	75.044	ENSAPOG00000015584	prpf3	99	72.881	Acanthochromis_polyacanthus
ENSGAGG00000013765	PRPF3	100	95.628	ENSAMEG00000001630	PRPF3	100	95.906	Ailuropoda_melanoleuca
ENSGAGG00000013765	PRPF3	100	75.221	ENSACIG00000007876	prpf3	99	71.469	Amphilophus_citrinellus
ENSGAGG00000013765	PRPF3	100	74.336	ENSAOCG00000011449	prpf3	99	72.831	Amphiprion_ocellaris
ENSGAGG00000013765	PRPF3	100	74.955	ENSATEG00000023583	prpf3	99	72.365	Anabas_testudineus
ENSGAGG00000013765	PRPF3	100	95.993	ENSAPLG00000002440	PRPF3	100	96.345	Anas_platyrhynchos
ENSGAGG00000013765	PRPF3	100	92.210	ENSACAG00000003176	PRPF3	100	93.159	Anolis_carolinensis
ENSGAGG00000013765	PRPF3	100	95.811	ENSANAG00000026138	PRPF3	100	96.053	Aotus_nancymaae
ENSGAGG00000013765	PRPF3	100	74.955	ENSACLG00000020127	prpf3	99	72.543	Astatotilapia_calliptera
ENSGAGG00000013765	PRPF3	100	76.007	ENSAMXG00000007306	prpf3	99	74.225	Astyanax_mexicanus
ENSGAGG00000013765	PRPF3	100	95.811	ENSBTAG00000013946	PRPF3	100	96.053	Bos_taurus
ENSGAGG00000013765	PRPF3	99	39.091	WBGene00010844	prp-3	95	36.405	Caenorhabditis_elegans
ENSGAGG00000013765	PRPF3	100	95.811	ENSCJAG00000009926	PRPF3	100	96.053	Callithrix_jacchus
ENSGAGG00000013765	PRPF3	100	95.811	ENSCAFG00000011820	PRPF3	100	96.053	Canis_familiaris
ENSGAGG00000013765	PRPF3	78	95.985	ENSCAFG00020019653	PRPF3	100	95.985	Canis_lupus_dingo
ENSGAGG00000013765	PRPF3	100	95.811	ENSCHIG00000015434	PRPF3	100	96.053	Capra_hircus
ENSGAGG00000013765	PRPF3	100	95.993	ENSTSYG00000001383	PRPF3	100	96.199	Carlito_syrichta
ENSGAGG00000013765	PRPF3	93	89.567	ENSCAPG00000017812	PRPF3	95	80.063	Cavia_aperea
ENSGAGG00000013765	PRPF3	100	95.811	ENSCPOG00000008068	PRPF3	100	95.906	Cavia_porcellus
ENSGAGG00000013765	PRPF3	100	95.811	ENSCCAG00000026380	PRPF3	100	96.053	Cebus_capucinus
ENSGAGG00000013765	PRPF3	97	81.132	ENSCATG00000041778	PRPF3	100	81.132	Cercocebus_atys
ENSGAGG00000013765	PRPF3	100	95.628	ENSCLAG00000015009	PRPF3	100	95.906	Chinchilla_lanigera
ENSGAGG00000013765	PRPF3	74	96.708	ENSCHOG00000011645	PRPF3	76	96.708	Choloepus_hoffmanni
ENSGAGG00000013765	PRPF3	100	99.636	ENSCPBG00000008216	PRPF3	100	99.708	Chrysemys_picta_bellii
ENSGAGG00000013765	PRPF3	76	57.110	ENSCING00000003312	-	99	58.095	Ciona_intestinalis
ENSGAGG00000013765	PRPF3	99	55.191	ENSCSAVG00000008720	-	94	54.874	Ciona_savignyi
ENSGAGG00000013765	PRPF3	100	94.900	ENSCANG00000036769	PRPF3	100	95.322	Colobus_angolensis_palliatus
ENSGAGG00000013765	PRPF3	100	95.811	ENSCGRG00001019100	Prpf3	100	96.053	Cricetulus_griseus_chok1gshd
ENSGAGG00000013765	PRPF3	100	95.811	ENSCGRG00000007322	Prpf3	100	96.053	Cricetulus_griseus_crigri
ENSGAGG00000013765	PRPF3	100	75.176	ENSCSEG00000002532	prpf3	99	71.589	Cynoglossus_semilaevis
ENSGAGG00000013765	PRPF3	100	75.623	ENSCVAG00000009318	prpf3	99	72.908	Cyprinodon_variegatus
ENSGAGG00000013765	PRPF3	100	74.823	ENSDARG00000086425	prpf3	99	73.115	Danio_rerio
ENSGAGG00000013765	PRPF3	99	95.413	ENSDNOG00000005904	PRPF3	100	88.889	Dasypus_novemcinctus
ENSGAGG00000013765	PRPF3	100	95.446	ENSDORG00000008664	Prpf3	100	95.591	Dipodomys_ordii
ENSGAGG00000013765	PRPF3	99	53.357	FBgn0036915	Prp3	99	53.442	Drosophila_melanogaster
ENSGAGG00000013765	PRPF3	100	94.536	ENSETEG00000019124	PRPF3	100	95.029	Echinops_telfairi
ENSGAGG00000013765	PRPF3	100	66.214	ENSEBUG00000011680	prpf3	99	63.874	Eptatretus_burgeri
ENSGAGG00000013765	PRPF3	100	95.628	ENSEASG00005001566	PRPF3	100	95.906	Equus_asinus_asinus
ENSGAGG00000013765	PRPF3	100	95.811	ENSECAG00000019840	PRPF3	100	96.053	Equus_caballus
ENSGAGG00000013765	PRPF3	83	96.454	ENSEEUG00000007338	PRPF3	85	96.454	Erinaceus_europaeus
ENSGAGG00000013765	PRPF3	100	67.845	ENSELUG00000013624	prpf3	99	67.094	Esox_lucius
ENSGAGG00000013765	PRPF3	100	95.811	ENSFCAG00000013940	PRPF3	100	96.053	Felis_catus
ENSGAGG00000013765	PRPF3	100	95.082	ENSFDAG00000010365	PRPF3	100	95.468	Fukomys_damarensis
ENSGAGG00000013765	PRPF3	100	74.866	ENSFHEG00000021746	prpf3	99	73.132	Fundulus_heteroclitus
ENSGAGG00000013765	PRPF3	100	74.735	ENSGMOG00000008535	prpf3	99	71.004	Gadus_morhua
ENSGAGG00000013765	PRPF3	100	95.993	ENSGALG00000028205	PRPF3	100	96.491	Gallus_gallus
ENSGAGG00000013765	PRPF3	100	74.234	ENSGAFG00000012671	prpf3	99	71.777	Gambusia_affinis
ENSGAGG00000013765	PRPF3	100	74.778	ENSGACG00000011792	prpf3	99	71.671	Gasterosteus_aculeatus
ENSGAGG00000013765	PRPF3	83	96.748	ENSGGOG00000013174	PRPF3	100	96.748	Gorilla_gorilla
ENSGAGG00000013765	PRPF3	100	75.315	ENSHBUG00000003493	prpf3	99	72.832	Haplochromis_burtoni
ENSGAGG00000013765	PRPF3	100	95.264	ENSHGLG00000016569	PRPF3	100	95.614	Heterocephalus_glaber_female
ENSGAGG00000013765	PRPF3	100	72.860	ENSHGLG00000016033	-	100	68.275	Heterocephalus_glaber_female
ENSGAGG00000013765	PRPF3	100	95.264	ENSHGLG00100007590	PRPF3	100	95.614	Heterocephalus_glaber_male
ENSGAGG00000013765	PRPF3	100	72.495	ENSHGLG00100008951	-	100	67.690	Heterocephalus_glaber_male
ENSGAGG00000013765	PRPF3	100	72.662	ENSHCOG00000014058	prpf3	99	68.706	Hippocampus_comes
ENSGAGG00000013765	PRPF3	100	76.114	ENSIPUG00000000902	PRPF3	99	73.714	Ictalurus_punctatus
ENSGAGG00000013765	PRPF3	100	95.811	ENSSTOG00000001889	PRPF3	100	96.053	Ictidomys_tridecemlineatus
ENSGAGG00000013765	PRPF3	99	74.047	ENSKMAG00000001390	prpf3	99	71.266	Kryptolebias_marmoratus
ENSGAGG00000013765	PRPF3	100	74.291	ENSLBEG00000026310	prpf3	99	71.711	Labrus_bergylta
ENSGAGG00000013765	PRPF3	91	81.873	ENSLACG00000010541	PRPF3	100	82.418	Latimeria_chalumnae
ENSGAGG00000013765	PRPF3	100	95.811	ENSLAFG00000004713	PRPF3	100	96.053	Loxodonta_africana
ENSGAGG00000013765	PRPF3	100	95.811	ENSMFAG00000039791	PRPF3	100	96.053	Macaca_fascicularis
ENSGAGG00000013765	PRPF3	87	96.098	ENSMMUG00000016301	PRPF3	98	96.091	Macaca_mulatta
ENSGAGG00000013765	PRPF3	100	95.811	ENSMNEG00000038161	PRPF3	100	96.053	Macaca_nemestrina
ENSGAGG00000013765	PRPF3	83	96.341	ENSMLEG00000040609	PRPF3	100	96.341	Mandrillus_leucophaeus
ENSGAGG00000013765	PRPF3	99	65.265	ENSMLEG00000041065	-	98	65.243	Mandrillus_leucophaeus
ENSGAGG00000013765	PRPF3	100	75.311	ENSMAMG00000014968	prpf3	99	72.521	Mastacembelus_armatus
ENSGAGG00000013765	PRPF3	100	73.462	ENSMZEG00005015970	prpf3	99	71.067	Maylandia_zebra
ENSGAGG00000013765	PRPF3	100	95.993	ENSMGAG00000000707	PRPF3	100	96.491	Meleagris_gallopavo
ENSGAGG00000013765	PRPF3	100	95.446	ENSMAUG00000017112	Prpf3	100	95.760	Mesocricetus_auratus
ENSGAGG00000013765	PRPF3	100	95.811	ENSMICG00000015386	PRPF3	100	96.053	Microcebus_murinus
ENSGAGG00000013765	PRPF3	100	95.811	ENSMOCG00000000242	Prpf3	100	96.053	Microtus_ochrogaster
ENSGAGG00000013765	PRPF3	100	68.586	ENSMMOG00000016131	prpf3	99	67.514	Mola_mola
ENSGAGG00000013765	PRPF3	100	95.993	ENSMODG00000018774	PRPF3	100	96.199	Monodelphis_domestica
ENSGAGG00000013765	PRPF3	100	74.194	ENSMALG00000007257	prpf3	99	71.041	Monopterus_albus
ENSGAGG00000013765	PRPF3	100	95.628	MGP_CAROLIEiJ_G0025354	Prpf3	100	95.906	Mus_caroli
ENSGAGG00000013765	PRPF3	100	95.628	ENSMUSG00000015748	Prpf3	100	95.906	Mus_musculus
ENSGAGG00000013765	PRPF3	100	95.446	MGP_PahariEiJ_G0026798	Prpf3	100	95.760	Mus_pahari
ENSGAGG00000013765	PRPF3	100	95.628	MGP_SPRETEiJ_G0026298	Prpf3	100	95.906	Mus_spretus
ENSGAGG00000013765	PRPF3	100	93.078	ENSMPUG00000005080	PRPF3	100	93.869	Mustela_putorius_furo
ENSGAGG00000013765	PRPF3	100	95.273	ENSMLUG00000004646	-	100	95.474	Myotis_lucifugus
ENSGAGG00000013765	PRPF3	100	95.811	ENSNGAG00000000910	Prpf3	100	96.053	Nannospalax_galili
ENSGAGG00000013765	PRPF3	100	73.077	ENSNBRG00000003462	prpf3	99	70.629	Neolamprologus_brichardi
ENSGAGG00000013765	PRPF3	87	96.098	ENSNLEG00000009841	PRPF3	100	96.098	Nomascus_leucogenys
ENSGAGG00000013765	PRPF3	87	99.286	ENSMEUG00000008733	PRPF3	89	98.230	Notamacropus_eugenii
ENSGAGG00000013765	PRPF3	100	95.264	ENSOPRG00000010139	PRPF3	100	95.614	Ochotona_princeps
ENSGAGG00000013765	PRPF3	100	71.763	ENSODEG00000014412	-	100	71.201	Octodon_degus
ENSGAGG00000013765	PRPF3	100	95.264	ENSODEG00000011363	-	100	95.614	Octodon_degus
ENSGAGG00000013765	PRPF3	100	73.462	ENSONIG00000006394	prpf3	99	71.067	Oreochromis_niloticus
ENSGAGG00000013765	PRPF3	100	67.148	ENSOANG00000015441	PRPF3	100	64.358	Ornithorhynchus_anatinus
ENSGAGG00000013765	PRPF3	100	95.811	ENSOCUG00000011760	PRPF3	100	96.053	Oryctolagus_cuniculus
ENSGAGG00000013765	PRPF3	100	74.776	ENSORLG00000010330	prpf3	99	72.222	Oryzias_latipes
ENSGAGG00000013765	PRPF3	100	74.776	ENSORLG00020009054	prpf3	99	72.222	Oryzias_latipes_hni
ENSGAGG00000013765	PRPF3	100	74.597	ENSORLG00015015016	prpf3	99	71.937	Oryzias_latipes_hsok
ENSGAGG00000013765	PRPF3	100	73.788	ENSOMEG00000000940	prpf3	99	71.920	Oryzias_melastigma
ENSGAGG00000013765	PRPF3	100	88.909	ENSOGAG00000005352	PRPF3	100	90.365	Otolemur_garnettii
ENSGAGG00000013765	PRPF3	100	95.811	ENSOARG00000020798	PRPF3	100	96.053	Ovis_aries
ENSGAGG00000013765	PRPF3	98	76.809	ENSPPAG00000043769	-	99	73.037	Pan_paniscus
ENSGAGG00000013765	PRPF3	100	95.628	ENSPPAG00000030983	PRPF3	100	95.906	Pan_paniscus
ENSGAGG00000013765	PRPF3	100	95.811	ENSPPRG00000000731	PRPF3	100	96.053	Panthera_pardus
ENSGAGG00000013765	PRPF3	100	95.811	ENSPTIG00000005516	PRPF3	100	96.053	Panthera_tigris_altaica
ENSGAGG00000013765	PRPF3	100	95.811	ENSPTRG00000001254	PRPF3	100	96.053	Pan_troglodytes
ENSGAGG00000013765	PRPF3	98	75.696	ENSPTRG00000047819	-	99	72.148	Pan_troglodytes
ENSGAGG00000013765	PRPF3	100	95.811	ENSPANG00000000499	PRPF3	100	95.906	Papio_anubis
ENSGAGG00000013765	PRPF3	100	77.362	ENSPKIG00000010501	prpf3	99	74.750	Paramormyrops_kingsleyae
ENSGAGG00000013765	PRPF3	100	98.179	ENSPSIG00000014877	PRPF3	100	98.538	Pelodiscus_sinensis
ENSGAGG00000013765	PRPF3	99	72.333	ENSPMGG00000007776	prpf3	99	67.197	Periophthalmus_magnuspinnatus
ENSGAGG00000013765	PRPF3	100	95.811	ENSPEMG00000011672	Prpf3	100	96.053	Peromyscus_maniculatus_bairdii
ENSGAGG00000013765	PRPF3	79	71.689	ENSPMAG00000005588	prpf3	99	69.978	Petromyzon_marinus
ENSGAGG00000013765	PRPF3	100	95.993	ENSPCIG00000008795	PRPF3	100	96.199	Phascolarctos_cinereus
ENSGAGG00000013765	PRPF3	100	74.245	ENSPFOG00000013638	prpf3	99	71.711	Poecilia_formosa
ENSGAGG00000013765	PRPF3	100	74.286	ENSPLAG00000018103	prpf3	99	72.143	Poecilia_latipinna
ENSGAGG00000013765	PRPF3	100	74.595	ENSPMEG00000023546	prpf3	99	71.857	Poecilia_mexicana
ENSGAGG00000013765	PRPF3	100	74.147	ENSPREG00000017216	prpf3	99	71.571	Poecilia_reticulata
ENSGAGG00000013765	PRPF3	73	84.660	ENSPPYG00000018646	-	100	84.660	Pongo_abelii
ENSGAGG00000013765	PRPF3	91	95.409	ENSPPYG00000000900	PRPF3	99	95.755	Pongo_abelii
ENSGAGG00000013765	PRPF3	100	95.446	ENSPCAG00000014908	PRPF3	87	95.608	Procavia_capensis
ENSGAGG00000013765	PRPF3	100	95.628	ENSPCOG00000013828	PRPF3	100	95.906	Propithecus_coquereli
ENSGAGG00000013765	PRPF3	100	94.900	ENSPVAG00000013472	PRPF3	100	95.322	Pteropus_vampyrus
ENSGAGG00000013765	PRPF3	100	75.315	ENSPNYG00000004279	prpf3	99	72.832	Pundamilia_nyererei
ENSGAGG00000013765	PRPF3	100	76.007	ENSPNAG00000001799	prpf3	99	73.662	Pygocentrus_nattereri
ENSGAGG00000013765	PRPF3	100	95.811	ENSRNOG00000025629	Prpf3	100	96.053	Rattus_norvegicus
ENSGAGG00000013765	PRPF3	81	92.908	ENSRBIG00000028854	PRPF3	98	92.908	Rhinopithecus_bieti
ENSGAGG00000013765	PRPF3	100	95.811	ENSRROG00000027464	PRPF3	100	96.053	Rhinopithecus_roxellana
ENSGAGG00000013765	PRPF3	100	87.250	ENSSBOG00000033104	PRPF3	100	89.181	Saimiri_boliviensis_boliviensis
ENSGAGG00000013765	PRPF3	100	95.628	ENSSHAG00000009548	PRPF3	100	95.766	Sarcophilus_harrisii
ENSGAGG00000013765	PRPF3	99	77.455	ENSSFOG00015022014	prpf3	99	73.239	Scleropages_formosus
ENSGAGG00000013765	PRPF3	100	74.256	ENSSMAG00000015739	prpf3	99	72.370	Scophthalmus_maximus
ENSGAGG00000013765	PRPF3	100	72.252	ENSSDUG00000006840	prpf3	99	69.484	Seriola_dumerili
ENSGAGG00000013765	PRPF3	100	74.126	ENSSLDG00000015423	prpf3	99	71.608	Seriola_lalandi_dorsalis
ENSGAGG00000013765	PRPF3	100	95.628	ENSSARG00000011064	PRPF3	100	95.906	Sorex_araneus
ENSGAGG00000013765	PRPF3	100	92.844	ENSSPUG00000000809	PRPF3	100	93.804	Sphenodon_punctatus
ENSGAGG00000013765	PRPF3	99	76.588	ENSSPAG00000018721	prpf3	99	72.663	Stegastes_partitus
ENSGAGG00000013765	PRPF3	100	95.811	ENSSSCG00000030119	PRPF3	100	96.053	Sus_scrofa
ENSGAGG00000013765	PRPF3	99	84.686	ENSTGUG00000004552	PRPF3	100	82.190	Taeniopygia_guttata
ENSGAGG00000013765	PRPF3	100	73.036	ENSTRUG00000014923	prpf3	99	71.079	Takifugu_rubripes
ENSGAGG00000013765	PRPF3	100	74.778	ENSTNIG00000008058	prpf3	100	72.057	Tetraodon_nigroviridis
ENSGAGG00000013765	PRPF3	87	97.059	ENSTBEG00000014072	PRPF3	88	96.667	Tupaia_belangeri
ENSGAGG00000013765	PRPF3	100	88.342	ENSTTRG00000010616	PRPF3	100	90.058	Tursiops_truncatus
ENSGAGG00000013765	PRPF3	100	95.811	ENSUAMG00000009345	PRPF3	100	95.811	Ursus_americanus
ENSGAGG00000013765	PRPF3	100	95.811	ENSUMAG00000003720	PRPF3	100	96.053	Ursus_maritimus
ENSGAGG00000013765	PRPF3	87	97.024	ENSVPAG00000005425	PRPF3	89	97.024	Vicugna_pacos
ENSGAGG00000013765	PRPF3	100	95.811	ENSVVUG00000007933	PRPF3	100	96.053	Vulpes_vulpes
ENSGAGG00000013765	PRPF3	100	87.726	ENSXETG00000018654	prpf3	100	86.938	Xenopus_tropicalis
ENSGAGG00000013765	PRPF3	100	74.107	ENSXMAG00000016347	prpf3	99	71.857	Xiphophorus_maculatus