EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000013851 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 5074 bases
Position: chrPPEB01008865.1:53201-58274
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000018720	zf-C2H2	PF00096.26	4.3e-63	1	9
ENSGAGP00000018720	zf-C2H2	PF00096.26	4.3e-63	2	9
ENSGAGP00000018720	zf-C2H2	PF00096.26	4.3e-63	3	9
ENSGAGP00000018720	zf-C2H2	PF00096.26	4.3e-63	4	9
ENSGAGP00000018720	zf-C2H2	PF00096.26	4.3e-63	5	9
ENSGAGP00000018720	zf-C2H2	PF00096.26	4.3e-63	6	9
ENSGAGP00000018720	zf-C2H2	PF00096.26	4.3e-63	7	9
ENSGAGP00000018720	zf-C2H2	PF00096.26	4.3e-63	8	9
ENSGAGP00000018720	zf-C2H2	PF00096.26	4.3e-63	9	9
ENSGAGP00000018720	zf-met	PF12874.7	3.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000021341	-	1266	-	ENSGAGP00000018720	421 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000013851's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000013851's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000013851	-	86	62.258	ENSGAGG00000020134	-	64	62.258
ENSGAGG00000013851	-	78	37.849	ENSGAGG00000020362	PRDM5	68	34.304
ENSGAGG00000013851	-	93	63.333	ENSGAGG00000014389	-	95	68.000
ENSGAGG00000013851	-	94	59.935	ENSGAGG00000006323	-	91	62.791
ENSGAGG00000013851	-	97	60.656	ENSGAGG00000009272	-	99	60.656
ENSGAGG00000013851	-	96	47.107	ENSGAGG00000001387	-	73	47.107
ENSGAGG00000013851	-	73	40.613	ENSGAGG00000003095	ZNF865	81	40.408
ENSGAGG00000013851	-	87	68.199	ENSGAGG00000006960	-	84	68.199
ENSGAGG00000013851	-	93	58.716	ENSGAGG00000010324	-	78	58.123
ENSGAGG00000013851	-	98	62.768	ENSGAGG00000006683	-	91	69.643
ENSGAGG00000013851	-	99	58.065	ENSGAGG00000002179	-	99	58.703
ENSGAGG00000013851	-	93	57.812	ENSGAGG00000001469	-	99	57.812
ENSGAGG00000013851	-	70	52.688	ENSGAGG00000004926	-	96	52.688
ENSGAGG00000013851	-	94	59.494	ENSGAGG00000011574	-	95	60.914
ENSGAGG00000013851	-	82	55.556	ENSGAGG00000018885	-	74	55.556
ENSGAGG00000013851	-	92	70.472	ENSGAGG00000017986	-	99	61.942
ENSGAGG00000013851	-	72	50.777	ENSGAGG00000013021	-	99	50.777
ENSGAGG00000013851	-	82	62.651	ENSGAGG00000015232	-	70	62.651
ENSGAGG00000013851	-	86	66.027	ENSGAGG00000007230	-	91	65.761
ENSGAGG00000013851	-	86	55.670	ENSGAGG00000001645	-	64	57.627
ENSGAGG00000013851	-	85	67.611	ENSGAGG00000000971	-	92	67.611
ENSGAGG00000013851	-	86	47.348	ENSGAGG00000017094	-	66	47.348
ENSGAGG00000013851	-	81	65.497	ENSGAGG00000008773	-	82	65.806
ENSGAGG00000013851	-	92	66.883	ENSGAGG00000012452	-	81	66.883
ENSGAGG00000013851	-	72	38.043	ENSGAGG00000022082	PRDM15	51	39.506
ENSGAGG00000013851	-	96	47.368	ENSGAGG00000017640	-	80	51.408
ENSGAGG00000013851	-	93	54.378	ENSGAGG00000018445	-	96	54.378
ENSGAGG00000013851	-	93	56.148	ENSGAGG00000005805	-	99	56.148
ENSGAGG00000013851	-	73	68.504	ENSGAGG00000009739	-	99	68.504
ENSGAGG00000013851	-	94	70.437	ENSGAGG00000010833	-	90	70.437
ENSGAGG00000013851	-	78	54.455	ENSGAGG00000011366	-	92	54.455
ENSGAGG00000013851	-	84	58.376	ENSGAGG00000006846	-	86	54.517
ENSGAGG00000013851	-	76	57.219	ENSGAGG00000006848	-	73	57.143
ENSGAGG00000013851	-	92	66.782	ENSGAGG00000004740	-	96	62.460
ENSGAGG00000013851	-	91	67.526	ENSGAGG00000016529	-	93	67.526
ENSGAGG00000013851	-	84	45.455	ENSGAGG00000021327	GFI1B	67	45.455
ENSGAGG00000013851	-	78	40.972	ENSGAGG00000003883	ZNF236	62	40.972
ENSGAGG00000013851	-	92	56.647	ENSGAGG00000011487	-	86	57.762
ENSGAGG00000013851	-	90	47.619	ENSGAGG00000005331	-	91	47.619
ENSGAGG00000013851	-	78	71.290	ENSGAGG00000019349	-	78	71.290
ENSGAGG00000013851	-	71	60.227	ENSGAGG00000010492	-	84	60.227
ENSGAGG00000013851	-	72	55.144	ENSGAGG00000011399	-	81	53.962
ENSGAGG00000013851	-	80	61.774	ENSGAGG00000015451	-	89	61.774
ENSGAGG00000013851	-	99	68.571	ENSGAGG00000020594	-	93	68.571
ENSGAGG00000013851	-	94	61.935	ENSGAGG00000002214	-	96	58.879
ENSGAGG00000013851	-	75	54.513	ENSGAGG00000020168	-	73	54.513
ENSGAGG00000013851	-	94	69.340	ENSGAGG00000014356	-	75	72.449
ENSGAGG00000013851	-	76	39.051	ENSGAGG00000022571	ZNF319	93	40.972
ENSGAGG00000013851	-	93	56.944	ENSGAGG00000002828	-	79	52.885

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000013851	-	70	54.264	ENSACIG00000011153	-	69	54.264	Amphilophus_citrinellus
ENSGAGG00000013851	-	87	51.770	ENSACIG00000019791	-	92	51.770	Amphilophus_citrinellus
ENSGAGG00000013851	-	70	51.739	ENSANAG00000032414	-	81	51.739	Aotus_nancymaae
ENSGAGG00000013851	-	75	44.156	ENSACLG00000017329	-	81	44.156	Astatotilapia_calliptera
ENSGAGG00000013851	-	74	47.692	ENSACLG00000001507	-	84	47.692	Astatotilapia_calliptera
ENSGAGG00000013851	-	74	46.063	ENSACLG00000014167	-	60	46.063	Astatotilapia_calliptera
ENSGAGG00000013851	-	72	42.160	ENSACLG00000022499	-	76	42.160	Astatotilapia_calliptera
ENSGAGG00000013851	-	79	50.424	ENSACLG00000020474	-	93	48.133	Astatotilapia_calliptera
ENSGAGG00000013851	-	79	53.231	ENSAMXG00000039770	-	85	53.231	Astyanax_mexicanus
ENSGAGG00000013851	-	78	56.721	ENSAMXG00000010078	-	87	56.721	Astyanax_mexicanus
ENSGAGG00000013851	-	78	55.973	ENSAMXG00000039162	-	95	55.973	Astyanax_mexicanus
ENSGAGG00000013851	-	76	56.106	ENSAMXG00000038324	-	71	56.106	Astyanax_mexicanus
ENSGAGG00000013851	-	72	61.233	ENSAMXG00000031646	-	94	61.233	Astyanax_mexicanus
ENSGAGG00000013851	-	76	51.495	ENSAMXG00000031844	-	95	51.495	Astyanax_mexicanus
ENSGAGG00000013851	-	78	62.153	ENSAMXG00000031501	-	89	62.153	Astyanax_mexicanus
ENSGAGG00000013851	-	76	56.774	ENSAMXG00000036849	-	81	56.774	Astyanax_mexicanus
ENSGAGG00000013851	-	72	46.885	ENSCHIG00000015741	-	87	48.193	Capra_hircus
ENSGAGG00000013851	-	87	64.286	ENSCCAG00000035188	-	83	64.286	Cebus_capucinus
ENSGAGG00000013851	-	76	68.047	ENSCPBG00000001258	-	97	68.047	Chrysemys_picta_bellii
ENSGAGG00000013851	-	73	52.131	ENSDNOG00000048084	-	99	52.131	Dasypus_novemcinctus
ENSGAGG00000013851	-	72	49.013	ENSETEG00000002865	-	85	49.013	Echinops_telfairi
ENSGAGG00000013851	-	75	54.054	ENSEBUG00000008157	-	99	54.054	Eptatretus_burgeri
ENSGAGG00000013851	-	93	50.360	ENSEBUG00000011479	-	82	50.360	Eptatretus_burgeri
ENSGAGG00000013851	-	78	52.117	ENSEBUG00000012748	-	69	52.117	Eptatretus_burgeri
ENSGAGG00000013851	-	72	50.679	ENSEBUG00000011582	-	73	50.679	Eptatretus_burgeri
ENSGAGG00000013851	-	91	52.258	ENSECAG00000035557	-	88	52.258	Equus_caballus
ENSGAGG00000013851	-	74	46.552	ENSFHEG00000016184	-	74	46.552	Fundulus_heteroclitus
ENSGAGG00000013851	-	75	43.874	ENSGMOG00000004315	-	99	43.874	Gadus_morhua
ENSGAGG00000013851	-	84	42.268	ENSGACG00000019863	-	98	42.268	Gasterosteus_aculeatus
ENSGAGG00000013851	-	69	43.046	ENSHBUG00000006238	-	94	43.046	Haplochromis_burtoni
ENSGAGG00000013851	-	75	44.604	ENSHBUG00000013264	-	84	42.640	Haplochromis_burtoni
ENSGAGG00000013851	-	78	48.750	ENSHBUG00000017372	-	87	50.282	Haplochromis_burtoni
ENSGAGG00000013851	-	75	43.130	ENSHBUG00000021028	-	82	43.130	Haplochromis_burtoni
ENSGAGG00000013851	-	73	50.442	ENSHBUG00000000146	-	78	50.442	Haplochromis_burtoni
ENSGAGG00000013851	-	66	54.110	ENSHBUG00000019800	-	91	54.110	Haplochromis_burtoni
ENSGAGG00000013851	-	77	53.091	ENSHGLG00000018394	-	98	53.091	Heterocephalus_glaber_female
ENSGAGG00000013851	-	70	53.986	ENSIPUG00000013065	-	93	53.986	Ictalurus_punctatus
ENSGAGG00000013851	-	71	49.711	ENSIPUG00000021527	-	90	53.704	Ictalurus_punctatus
ENSGAGG00000013851	-	72	55.172	ENSIPUG00000021484	-	98	55.172	Ictalurus_punctatus
ENSGAGG00000013851	-	76	52.896	ENSIPUG00000021434	-	93	52.896	Ictalurus_punctatus
ENSGAGG00000013851	-	75	55.305	ENSIPUG00000009750	-	78	55.305	Ictalurus_punctatus
ENSGAGG00000013851	-	72	55.957	ENSIPUG00000021518	-	86	55.714	Ictalurus_punctatus
ENSGAGG00000013851	-	73	54.357	ENSIPUG00000001941	-	87	54.357	Ictalurus_punctatus
ENSGAGG00000013851	-	72	54.955	ENSIPUG00000006936	-	85	52.500	Ictalurus_punctatus
ENSGAGG00000013851	-	74	56.842	ENSIPUG00000022751	-	96	55.000	Ictalurus_punctatus
ENSGAGG00000013851	-	72	57.353	ENSIPUG00000021472	-	80	57.353	Ictalurus_punctatus
ENSGAGG00000013851	-	70	52.133	ENSIPUG00000003960	-	85	52.133	Ictalurus_punctatus
ENSGAGG00000013851	-	74	61.719	ENSIPUG00000011073	-	99	61.719	Ictalurus_punctatus
ENSGAGG00000013851	-	74	53.191	ENSIPUG00000015233	-	58	53.191	Ictalurus_punctatus
ENSGAGG00000013851	-	76	54.098	ENSSTOG00000034297	-	70	54.098	Ictidomys_tridecemlineatus
ENSGAGG00000013851	-	78	60.000	ENSMFAG00000046052	-	85	60.000	Macaca_fascicularis
ENSGAGG00000013851	-	70	60.000	ENSMNEG00000041636	-	84	60.000	Macaca_nemestrina
ENSGAGG00000013851	-	78	60.000	ENSMLEG00000032640	-	85	60.000	Mandrillus_leucophaeus
ENSGAGG00000013851	-	87	41.066	ENSMAMG00000009051	-	96	45.455	Mastacembelus_armatus
ENSGAGG00000013851	-	73	50.000	ENSMZEG00005027285	-	84	50.000	Maylandia_zebra
ENSGAGG00000013851	-	75	42.718	ENSMZEG00005012737	-	80	42.718	Maylandia_zebra
ENSGAGG00000013851	-	72	44.906	ENSMZEG00005027950	-	89	44.906	Maylandia_zebra
ENSGAGG00000013851	-	93	43.860	ENSMZEG00005020736	-	96	43.860	Maylandia_zebra
ENSGAGG00000013851	-	72	47.679	ENSMZEG00005021421	-	96	47.679	Maylandia_zebra
ENSGAGG00000013851	-	78	45.918	ENSMZEG00005019982	-	96	41.367	Maylandia_zebra
ENSGAGG00000013851	-	71	50.318	ENSMALG00000004413	-	96	50.575	Monopterus_albus
ENSGAGG00000013851	-	90	53.459	ENSNBRG00000013604	-	93	53.459	Neolamprologus_brichardi
ENSGAGG00000013851	-	83	47.934	ENSNBRG00000015652	-	83	47.739	Neolamprologus_brichardi
ENSGAGG00000013851	-	79	53.846	ENSNBRG00000015873	-	97	53.431	Neolamprologus_brichardi
ENSGAGG00000013851	-	85	41.277	ENSNBRG00000016603	-	93	41.277	Neolamprologus_brichardi
ENSGAGG00000013851	-	80	44.509	ENSNBRG00000016582	-	83	44.509	Neolamprologus_brichardi
ENSGAGG00000013851	-	75	42.035	ENSONIG00000008953	-	94	42.035	Oreochromis_niloticus
ENSGAGG00000013851	-	71	48.214	ENSONIG00000021124	-	99	48.214	Oreochromis_niloticus
ENSGAGG00000013851	-	83	45.848	ENSONIG00000015166	-	100	45.848	Oreochromis_niloticus
ENSGAGG00000013851	-	73	47.090	ENSONIG00000020516	-	97	45.876	Oreochromis_niloticus
ENSGAGG00000013851	-	75	40.780	ENSONIG00000001834	-	100	40.780	Oreochromis_niloticus
ENSGAGG00000013851	-	73	47.826	ENSONIG00000000093	-	99	44.000	Oreochromis_niloticus
ENSGAGG00000013851	-	72	41.935	ENSONIG00000000122	-	100	41.935	Oreochromis_niloticus
ENSGAGG00000013851	-	73	40.136	ENSONIG00000007931	-	85	40.136	Oreochromis_niloticus
ENSGAGG00000013851	-	91	45.946	ENSORLG00015012951	-	83	48.125	Oryzias_latipes_hsok
ENSGAGG00000013851	-	74	57.377	ENSOGAG00000025289	-	85	57.377	Otolemur_garnettii
ENSGAGG00000013851	-	78	60.000	ENSPANG00000030978	-	90	60.000	Papio_anubis
ENSGAGG00000013851	-	73	50.249	ENSPEMG00000016975	Zfp940	74	50.249	Peromyscus_maniculatus_bairdii
ENSGAGG00000013851	-	93	48.148	ENSPMEG00000004595	-	95	49.818	Poecilia_mexicana
ENSGAGG00000013851	-	76	58.442	ENSPPYG00000009906	-	71	58.442	Pongo_abelii
ENSGAGG00000013851	-	74	46.809	ENSPNYG00000024244	-	87	46.809	Pundamilia_nyererei
ENSGAGG00000013851	-	72	58.482	ENSPNAG00000011625	-	92	59.130	Pygocentrus_nattereri
ENSGAGG00000013851	-	73	59.333	ENSPNAG00000019338	-	95	59.333	Pygocentrus_nattereri
ENSGAGG00000013851	-	78	59.655	ENSSBOG00000029728	-	85	59.655	Saimiri_boliviensis_boliviensis
ENSGAGG00000013851	-	76	62.623	ENSSPUG00000010059	-	84	62.623	Sphenodon_punctatus