EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000013979 (Gene tree)
Gene ID: -
Gene Symbol: SALL1
Alias: Hsal1|TBS|ZNF794
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 16505 bases
Position: chrPPEB01000130.1:394914-411418
Accession: 10524
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000018886	zf-C2H2	PF00096.26	5.2e-36	1	6
ENSGAGP00000018886	zf-C2H2	PF00096.26	5.2e-36	2	6
ENSGAGP00000018886	zf-C2H2	PF00096.26	5.2e-36	3	6
ENSGAGP00000018886	zf-C2H2	PF00096.26	5.2e-36	4	6
ENSGAGP00000018886	zf-C2H2	PF00096.26	5.2e-36	5	6
ENSGAGP00000018886	zf-C2H2	PF00096.26	5.2e-36	6	6
ENSGAGP00000018884	zf-C2H2	PF00096.26	1.6e-33	1	6
ENSGAGP00000018884	zf-C2H2	PF00096.26	1.6e-33	2	6
ENSGAGP00000018884	zf-C2H2	PF00096.26	1.6e-33	3	6
ENSGAGP00000018884	zf-C2H2	PF00096.26	1.6e-33	4	6
ENSGAGP00000018884	zf-C2H2	PF00096.26	1.6e-33	5	6
ENSGAGP00000018884	zf-C2H2	PF00096.26	1.6e-33	6	6
ENSGAGP00000018886	zf-met	PF12874.7	7.3e-25	1	5
ENSGAGP00000018886	zf-met	PF12874.7	7.3e-25	2	5
ENSGAGP00000018886	zf-met	PF12874.7	7.3e-25	3	5
ENSGAGP00000018886	zf-met	PF12874.7	7.3e-25	4	5
ENSGAGP00000018886	zf-met	PF12874.7	7.3e-25	5	5
ENSGAGP00000018884	zf-met	PF12874.7	1.3e-24	1	5
ENSGAGP00000018884	zf-met	PF12874.7	1.3e-24	2	5
ENSGAGP00000018884	zf-met	PF12874.7	1.3e-24	3	5
ENSGAGP00000018884	zf-met	PF12874.7	1.3e-24	4	5
ENSGAGP00000018884	zf-met	PF12874.7	1.3e-24	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000021530	SALL1-202	4081	-	ENSGAGP00000018886	1212 (aa)	-	-
ENSGAGT00000021528	SALL1-201	4829	-	ENSGAGP00000018884	1309 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000013979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000013979's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000013979	SALL1	100	63.462	ENSGAGG00000000925	SALL3	100	63.462
ENSGAGG00000013979	SALL1	89	63.462	ENSGAGG00000002297	SALL4	100	63.462
ENSGAGG00000013979	SALL1	68	55.556	ENSGAGG00000003883	ZNF236	82	55.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000013979	SALL1	99	86.786	ENSG00000103449	SALL1	100	86.879	Homo_sapiens
ENSGAGG00000013979	SALL1	100	70.240	ENSAPOG00000022764	sall1a	100	69.565	Acanthochromis_polyacanthus
ENSGAGG00000013979	SALL1	99	85.691	ENSAMEG00000006817	SALL1	100	85.008	Ailuropoda_melanoleuca
ENSGAGG00000013979	SALL1	100	68.820	ENSACIG00000004231	sall1a	100	68.544	Amphilophus_citrinellus
ENSGAGG00000013979	SALL1	100	70.315	ENSAOCG00000002800	sall1a	100	69.640	Amphiprion_ocellaris
ENSGAGG00000013979	SALL1	100	70.315	ENSAPEG00000010179	sall1a	100	69.640	Amphiprion_percula
ENSGAGG00000013979	SALL1	99	69.670	ENSATEG00000003006	sall1a	100	69.337	Anabas_testudineus
ENSGAGG00000013979	SALL1	100	94.118	ENSAPLG00000003356	SALL1	100	94.118	Anas_platyrhynchos
ENSGAGG00000013979	SALL1	99	86.903	ENSACAG00000014399	SALL1	96	86.491	Anolis_carolinensis
ENSGAGG00000013979	SALL1	99	86.928	ENSANAG00000027238	SALL1	100	86.460	Aotus_nancymaae
ENSGAGG00000013979	SALL1	100	68.896	ENSACLG00000017148	sall1a	100	68.544	Astatotilapia_calliptera
ENSGAGG00000013979	SALL1	100	71.268	ENSAMXG00000018599	sall1a	100	70.796	Astyanax_mexicanus
ENSGAGG00000013979	SALL1	99	53.210	ENSAMXG00000017702	sall1b	99	52.963	Astyanax_mexicanus
ENSGAGG00000013979	SALL1	100	85.258	ENSBTAG00000008544	SALL1	100	85.334	Bos_taurus
ENSGAGG00000013979	SALL1	99	86.765	ENSCJAG00000001740	SALL1	100	86.611	Callithrix_jacchus
ENSGAGG00000013979	SALL1	99	85.212	ENSCAFG00000009755	SALL1	100	84.970	Canis_familiaris
ENSGAGG00000013979	SALL1	99	85.212	ENSCAFG00020002842	SALL1	100	84.970	Canis_lupus_dingo
ENSGAGG00000013979	SALL1	100	85.152	ENSCHIG00000026074	SALL1	100	84.662	Capra_hircus
ENSGAGG00000013979	SALL1	99	87.747	ENSTSYG00000029464	SALL1	100	87.215	Carlito_syrichta
ENSGAGG00000013979	SALL1	99	87.407	ENSCPOG00000006564	SALL1	99	87.237	Cavia_porcellus
ENSGAGG00000013979	SALL1	99	84.124	ENSCCAG00000001639	SALL1	100	84.242	Cebus_capucinus
ENSGAGG00000013979	SALL1	99	87.224	ENSCATG00000004982	SALL1	100	87.036	Cercocebus_atys
ENSGAGG00000013979	SALL1	99	87.984	ENSCLAG00000006380	SALL1	100	87.510	Chinchilla_lanigera
ENSGAGG00000013979	SALL1	99	85.854	ENSCSAG00000005319	SALL1	100	85.844	Chlorocebus_sabaeus
ENSGAGG00000013979	SALL1	72	88.142	ENSCHOG00000000800	-	69	88.142	Choloepus_hoffmanni
ENSGAGG00000013979	SALL1	100	98.854	ENSCPBG00000015924	SALL1	100	98.854	Chrysemys_picta_bellii
ENSGAGG00000013979	SALL1	99	87.295	ENSCANG00000036664	SALL1	100	87.469	Colobus_angolensis_palliatus
ENSGAGG00000013979	SALL1	99	84.439	ENSCGRG00001023314	-	100	83.624	Cricetulus_griseus_chok1gshd
ENSGAGG00000013979	SALL1	99	84.439	ENSCGRG00000009496	Sall1	99	83.746	Cricetulus_griseus_crigri
ENSGAGG00000013979	SALL1	99	68.119	ENSCSEG00000009349	sall1a	99	68.114	Cynoglossus_semilaevis
ENSGAGG00000013979	SALL1	90	68.044	ENSCVAG00000020513	sall1a	99	67.481	Cyprinodon_variegatus
ENSGAGG00000013979	SALL1	99	48.293	ENSDARG00000075891	sall1b	99	47.705	Danio_rerio
ENSGAGG00000013979	SALL1	100	70.702	ENSDARG00000074319	sall1a	100	70.460	Danio_rerio
ENSGAGG00000013979	SALL1	99	86.524	ENSDNOG00000016413	SALL1	100	86.084	Dasypus_novemcinctus
ENSGAGG00000013979	SALL1	99	87.325	ENSETEG00000015150	SALL1	99	87.170	Echinops_telfairi
ENSGAGG00000013979	SALL1	90	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSGAGG00000013979	SALL1	99	35.845	ENSEBUG00000008798	SALL1	99	36.158	Eptatretus_burgeri
ENSGAGG00000013979	SALL1	99	86.584	ENSEASG00005014602	SALL1	100	86.443	Equus_asinus_asinus
ENSGAGG00000013979	SALL1	91	83.852	ENSECAG00000011334	SALL1	99	84.104	Equus_caballus
ENSGAGG00000013979	SALL1	99	85.620	ENSEEUG00000002014	SALL1	99	85.027	Erinaceus_europaeus
ENSGAGG00000013979	SALL1	100	67.949	ENSELUG00000006159	sall1a	100	67.855	Esox_lucius
ENSGAGG00000013979	SALL1	100	52.753	ENSELUG00000017774	-	100	52.498	Esox_lucius
ENSGAGG00000013979	SALL1	99	83.921	ENSFCAG00000024654	SALL1	100	83.852	Felis_catus
ENSGAGG00000013979	SALL1	100	92.895	ENSFALG00000000074	SALL1	100	92.895	Ficedula_albicollis
ENSGAGG00000013979	SALL1	100	69.206	ENSFHEG00000012579	sall1a	100	68.694	Fundulus_heteroclitus
ENSGAGG00000013979	SALL1	75	63.462	ENSFHEG00000008424	-	100	61.538	Fundulus_heteroclitus
ENSGAGG00000013979	SALL1	100	67.790	ENSGMOG00000006103	sall1a	100	67.616	Gadus_morhua
ENSGAGG00000013979	SALL1	98	41.142	ENSGMOG00000013383	-	99	41.519	Gadus_morhua
ENSGAGG00000013979	SALL1	100	93.234	ENSGALG00000039238	SALL1	100	93.201	Gallus_gallus
ENSGAGG00000013979	SALL1	100	69.467	ENSGAFG00000009964	sall1a	100	69.190	Gambusia_affinis
ENSGAGG00000013979	SALL1	99	68.413	ENSGACG00000016702	sall1a	99	67.814	Gasterosteus_aculeatus
ENSGAGG00000013979	SALL1	99	86.868	ENSGGOG00000000663	SALL1	100	86.631	Gorilla_gorilla
ENSGAGG00000013979	SALL1	100	68.896	ENSHBUG00000022005	sall1a	100	68.544	Haplochromis_burtoni
ENSGAGG00000013979	SALL1	99	87.325	ENSHGLG00000004288	-	100	86.519	Heterocephalus_glaber_female
ENSGAGG00000013979	SALL1	99	87.325	ENSHGLG00100017496	SALL1	100	86.519	Heterocephalus_glaber_male
ENSGAGG00000013979	SALL1	100	67.094	ENSHCOG00000000974	sall1a	100	67.163	Hippocampus_comes
ENSGAGG00000013979	SALL1	99	50.075	ENSIPUG00000022928	sall1b	99	50.150	Ictalurus_punctatus
ENSGAGG00000013979	SALL1	100	71.174	ENSIPUG00000016265	SALL1	100	70.871	Ictalurus_punctatus
ENSGAGG00000013979	SALL1	99	86.337	ENSSTOG00000020885	SALL1	100	85.986	Ictidomys_tridecemlineatus
ENSGAGG00000013979	SALL1	100	69.337	ENSKMAG00000016681	sall1a	100	68.666	Kryptolebias_marmoratus
ENSGAGG00000013979	SALL1	99	68.045	ENSLBEG00000012207	sall1a	95	67.749	Labrus_bergylta
ENSGAGG00000013979	SALL1	99	40.714	ENSLACG00000014018	-	99	40.401	Latimeria_chalumnae
ENSGAGG00000013979	SALL1	100	82.277	ENSLACG00000003556	SALL1	100	82.277	Latimeria_chalumnae
ENSGAGG00000013979	SALL1	100	75.859	ENSLOCG00000007283	sall1b	100	75.710	Lepisosteus_oculatus
ENSGAGG00000013979	SALL1	99	86.431	ENSLAFG00000015251	SALL1	100	86.579	Loxodonta_africana
ENSGAGG00000013979	SALL1	99	87.020	ENSMFAG00000003298	SALL1	100	86.772	Macaca_fascicularis
ENSGAGG00000013979	SALL1	99	87.020	ENSMMUG00000017200	SALL1	100	87.113	Macaca_mulatta
ENSGAGG00000013979	SALL1	99	86.868	ENSMNEG00000034770	SALL1	100	87.042	Macaca_nemestrina
ENSGAGG00000013979	SALL1	99	87.295	ENSMLEG00000036406	SALL1	100	87.551	Mandrillus_leucophaeus
ENSGAGG00000013979	SALL1	99	70.120	ENSMAMG00000004164	sall1a	99	69.820	Mastacembelus_armatus
ENSGAGG00000013979	SALL1	100	69.121	ENSMZEG00005006479	sall1a	100	68.544	Maylandia_zebra
ENSGAGG00000013979	SALL1	100	93.234	ENSMGAG00000004704	SALL1	100	93.224	Meleagris_gallopavo
ENSGAGG00000013979	SALL1	99	84.717	ENSMAUG00000019093	Sall1	100	83.638	Mesocricetus_auratus
ENSGAGG00000013979	SALL1	100	85.468	ENSMICG00000036486	SALL1	100	84.943	Microcebus_murinus
ENSGAGG00000013979	SALL1	99	69.181	ENSMMOG00000016400	sall1a	99	68.722	Mola_mola
ENSGAGG00000013979	SALL1	99	90.594	ENSMODG00000013114	SALL1	99	90.374	Monodelphis_domestica
ENSGAGG00000013979	SALL1	99	69.670	ENSMALG00000013400	sall1a	99	69.369	Monopterus_albus
ENSGAGG00000013979	SALL1	99	83.768	MGP_CAROLIEiJ_G0031362	Sall1	100	82.691	Mus_caroli
ENSGAGG00000013979	SALL1	99	83.605	ENSMUSG00000031665	Sall1	100	82.628	Mus_musculus
ENSGAGG00000013979	SALL1	99	83.537	MGP_PahariEiJ_G0022961	Sall1	100	82.415	Mus_pahari
ENSGAGG00000013979	SALL1	99	83.605	MGP_SPRETEiJ_G0032480	Sall1	100	82.704	Mus_spretus
ENSGAGG00000013979	SALL1	100	84.539	ENSMPUG00000003265	SALL1	96	83.991	Mustela_putorius_furo
ENSGAGG00000013979	SALL1	100	79.055	ENSMLUG00000015541	SALL1	100	79.754	Myotis_lucifugus
ENSGAGG00000013979	SALL1	100	68.896	ENSNBRG00000009307	sall1a	100	68.544	Neolamprologus_brichardi
ENSGAGG00000013979	SALL1	95	94.413	ENSNLEG00000001008	SALL1	100	93.889	Nomascus_leucogenys
ENSGAGG00000013979	SALL1	99	90.594	ENSMEUG00000012206	SALL1	99	90.145	Notamacropus_eugenii
ENSGAGG00000013979	SALL1	81	87.374	ENSOPRG00000005645	SALL1	74	87.249	Ochotona_princeps
ENSGAGG00000013979	SALL1	99	87.737	ENSODEG00000003685	SALL1	100	87.281	Octodon_degus
ENSGAGG00000013979	SALL1	100	69.046	ENSONIG00000002831	sall1a	100	68.694	Oreochromis_niloticus
ENSGAGG00000013979	SALL1	90	90.943	ENSOANG00000013399	SALL1	97	90.943	Ornithorhynchus_anatinus
ENSGAGG00000013979	SALL1	100	69.092	ENSORLG00000013827	sall1a	100	68.891	Oryzias_latipes
ENSGAGG00000013979	SALL1	100	69.017	ENSORLG00020020570	sall1a	100	68.816	Oryzias_latipes_hni
ENSGAGG00000013979	SALL1	100	69.092	ENSORLG00015018830	sall1a	100	68.891	Oryzias_latipes_hsok
ENSGAGG00000013979	SALL1	100	68.932	ENSOMEG00000016043	sall1a	100	68.666	Oryzias_melastigma
ENSGAGG00000013979	SALL1	99	86.230	ENSOGAG00000027316	SALL1	100	85.660	Otolemur_garnettii
ENSGAGG00000013979	SALL1	100	79.788	ENSOARG00000017583	SALL1	100	79.803	Ovis_aries
ENSGAGG00000013979	SALL1	99	87.113	ENSPPAG00000035657	SALL1	99	87.047	Pan_paniscus
ENSGAGG00000013979	SALL1	99	65.214	ENSPPAG00000035136	-	99	66.073	Pan_paniscus
ENSGAGG00000013979	SALL1	100	83.689	ENSPPRG00000023283	SALL1	100	83.689	Panthera_pardus
ENSGAGG00000013979	SALL1	89	71.134	ENSPTIG00000013539	-	96	71.266	Panthera_tigris_altaica
ENSGAGG00000013979	SALL1	98	65.581	ENSPTRG00000045256	-	99	65.661	Pan_troglodytes
ENSGAGG00000013979	SALL1	99	87.081	ENSPTRG00000008108	SALL1	100	86.980	Pan_troglodytes
ENSGAGG00000013979	SALL1	99	87.213	ENSPANG00000024176	SALL1	100	87.102	Papio_anubis
ENSGAGG00000013979	SALL1	100	66.423	ENSPKIG00000022251	sall1a	100	66.240	Paramormyrops_kingsleyae
ENSGAGG00000013979	SALL1	100	66.616	ENSPKIG00000005383	-	100	66.768	Paramormyrops_kingsleyae
ENSGAGG00000013979	SALL1	100	96.782	ENSPSIG00000008582	SALL1	100	96.715	Pelodiscus_sinensis
ENSGAGG00000013979	SALL1	99	67.100	ENSPMGG00000021788	sall1a	99	66.418	Periophthalmus_magnuspinnatus
ENSGAGG00000013979	SALL1	99	90.347	ENSPCIG00000017840	SALL1	99	89.916	Phascolarctos_cinereus
ENSGAGG00000013979	SALL1	100	69.417	ENSPFOG00000015799	sall1a	95	69.468	Poecilia_formosa
ENSGAGG00000013979	SALL1	100	69.542	ENSPLAG00000022539	sall1a	100	69.190	Poecilia_latipinna
ENSGAGG00000013979	SALL1	100	69.767	ENSPMEG00000020894	sall1a	100	69.415	Poecilia_mexicana
ENSGAGG00000013979	SALL1	100	69.617	ENSPREG00000006802	sall1a	100	69.265	Poecilia_reticulata
ENSGAGG00000013979	SALL1	90	85.896	ENSPPYG00000007345	SALL1	96	85.981	Pongo_abelii
ENSGAGG00000013979	SALL1	85	86.420	ENSPCAG00000008162	SALL1	93	86.420	Procavia_capensis
ENSGAGG00000013979	SALL1	100	85.932	ENSPCOG00000028192	SALL1	100	86.160	Propithecus_coquereli
ENSGAGG00000013979	SALL1	72	84.696	ENSPVAG00000015374	SALL1	100	85.047	Pteropus_vampyrus
ENSGAGG00000013979	SALL1	100	68.971	ENSPNYG00000010865	sall1a	100	68.619	Pundamilia_nyererei
ENSGAGG00000013979	SALL1	99	53.609	ENSPNAG00000007442	sall1b	99	53.158	Pygocentrus_nattereri
ENSGAGG00000013979	SALL1	99	63.462	ENSPNAG00000028248	-	70	63.462	Pygocentrus_nattereri
ENSGAGG00000013979	SALL1	100	68.764	ENSPNAG00000023644	sall1a	100	68.441	Pygocentrus_nattereri
ENSGAGG00000013979	SALL1	100	83.371	ENSRNOG00000013907	Sall1	100	83.599	Rattus_norvegicus
ENSGAGG00000013979	SALL1	99	86.917	ENSRBIG00000015707	SALL1	100	87.173	Rhinopithecus_bieti
ENSGAGG00000013979	SALL1	99	86.928	ENSRROG00000035777	SALL1	100	87.020	Rhinopithecus_roxellana
ENSGAGG00000013979	SALL1	99	86.694	ENSSBOG00000032186	SALL1	100	86.243	Saimiri_boliviensis_boliviensis
ENSGAGG00000013979	SALL1	99	89.761	ENSSHAG00000009477	SALL1	99	89.297	Sarcophilus_harrisii
ENSGAGG00000013979	SALL1	100	67.169	ENSSFOG00015020020	sall1a	100	67.219	Scleropages_formosus
ENSGAGG00000013979	SALL1	100	68.694	ENSSFOG00015001590	sall1a	99	68.736	Scleropages_formosus
ENSGAGG00000013979	SALL1	99	70.045	ENSSMAG00000009160	sall1a	99	69.595	Scophthalmus_maximus
ENSGAGG00000013979	SALL1	90	59.184	ENSSDUG00000000748	sall1b	99	59.184	Seriola_dumerili
ENSGAGG00000013979	SALL1	99	70.420	ENSSDUG00000006507	sall1a	99	69.895	Seriola_dumerili
ENSGAGG00000013979	SALL1	99	70.495	ENSSLDG00000017721	sall1a	99	69.970	Seriola_lalandi_dorsalis
ENSGAGG00000013979	SALL1	99	86.008	ENSSARG00000000661	SALL1	100	85.171	Sorex_araneus
ENSGAGG00000013979	SALL1	100	93.583	ENSSPUG00000000156	SALL1	100	93.583	Sphenodon_punctatus
ENSGAGG00000013979	SALL1	100	70.487	ENSSPAG00000021615	sall1a	100	69.813	Stegastes_partitus
ENSGAGG00000013979	SALL1	99	84.446	ENSSSCG00000002836	SALL1	100	84.540	Sus_scrofa
ENSGAGG00000013979	SALL1	100	93.354	ENSTGUG00000007514	SALL1	100	93.354	Taeniopygia_guttata
ENSGAGG00000013979	SALL1	91	66.694	ENSTRUG00000008950	sall1a	100	67.105	Takifugu_rubripes
ENSGAGG00000013979	SALL1	92	66.284	ENSTNIG00000004257	sall1a	100	66.448	Tetraodon_nigroviridis
ENSGAGG00000013979	SALL1	67	92.414	ENSTBEG00000002119	-	53	91.781	Tupaia_belangeri
ENSGAGG00000013979	SALL1	90	84.072	ENSUAMG00000023379	-	92	84.157	Ursus_americanus
ENSGAGG00000013979	SALL1	90	83.080	ENSVVUG00000019383	-	99	83.756	Vulpes_vulpes
ENSGAGG00000013979	SALL1	100	80.658	ENSXETG00000018417	sall1	100	78.167	Xenopus_tropicalis
ENSGAGG00000013979	SALL1	96	35.240	ENSXETG00000017176	sall2	70	39.754	Xenopus_tropicalis
ENSGAGG00000013979	SALL1	100	69.542	ENSXMAG00000016273	sall1a	100	69.190	Xiphophorus_maculatus