EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000014083 (Gene tree)
Gene ID: -
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 14528 bases
Position: chrPPEB01001698.1:2767-17294
Accession: 13997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000019031	zf-C2H2	PF00096.26	2.3e-12	1	2
ENSGAGP00000019031	zf-C2H2	PF00096.26	2.3e-12	2	2
ENSGAGP00000019031	zf-met	PF12874.7	7.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000021693	PRDM12-201	1065	-	ENSGAGP00000019031	354 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000014083's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000014083's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000014083	PRDM12	69	40.000	ENSGAGG00000020362	PRDM5	93	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000014083	PRDM12	94	92.814	ENSG00000130711	PRDM12	100	88.283	Homo_sapiens
ENSGAGG00000014083	PRDM12	99	66.757	ENSAPOG00000018234	-	100	67.120	Acanthochromis_polyacanthus
ENSGAGG00000014083	PRDM12	99	76.302	ENSAPOG00000016051	prdm12b	100	76.562	Acanthochromis_polyacanthus
ENSGAGG00000014083	PRDM12	91	91.331	ENSAMEG00000016234	PRDM12	99	91.331	Ailuropoda_melanoleuca
ENSGAGG00000014083	PRDM12	99	78.364	ENSACIG00000005193	-	100	78.364	Amphilophus_citrinellus
ENSGAGG00000014083	PRDM12	99	77.926	ENSACIG00000019578	prdm12b	100	77.926	Amphilophus_citrinellus
ENSGAGG00000014083	PRDM12	99	77.632	ENSAOCG00000015040	prdm12b	100	77.632	Amphiprion_ocellaris
ENSGAGG00000014083	PRDM12	100	72.585	ENSAPEG00000022849	-	100	73.890	Amphiprion_percula
ENSGAGG00000014083	PRDM12	99	78.249	ENSAPEG00000015092	prdm12b	100	78.249	Amphiprion_percula
ENSGAGG00000014083	PRDM12	95	81.579	ENSATEG00000014595	-	99	81.579	Anabas_testudineus
ENSGAGG00000014083	PRDM12	96	92.941	ENSANAG00000020616	PRDM12	100	92.941	Aotus_nancymaae
ENSGAGG00000014083	PRDM12	99	75.381	ENSACLG00000007631	-	100	76.142	Astatotilapia_calliptera
ENSGAGG00000014083	PRDM12	99	80.110	ENSACLG00000011876	prdm12b	100	80.110	Astatotilapia_calliptera
ENSGAGG00000014083	PRDM12	99	83.514	ENSAMXG00000033665	prdm12b	100	85.405	Astyanax_mexicanus
ENSGAGG00000014083	PRDM12	99	80.833	ENSAMXG00000008540	PRDM12	100	80.833	Astyanax_mexicanus
ENSGAGG00000014083	PRDM12	94	93.413	ENSBTAG00000023797	PRDM12	100	90.305	Bos_taurus
ENSGAGG00000014083	PRDM12	94	93.114	ENSCJAG00000020540	PRDM12	100	90.278	Callithrix_jacchus
ENSGAGG00000014083	PRDM12	82	93.127	ENSCAFG00000023076	PRDM12	99	88.785	Canis_familiaris
ENSGAGG00000014083	PRDM12	94	93.713	ENSCAFG00020024046	PRDM12	100	89.835	Canis_lupus_dingo
ENSGAGG00000014083	PRDM12	94	93.713	ENSCHIG00000025005	PRDM12	100	90.331	Capra_hircus
ENSGAGG00000014083	PRDM12	88	93.291	ENSCPOG00000005901	PRDM12	95	93.291	Cavia_porcellus
ENSGAGG00000014083	PRDM12	94	93.114	ENSCCAG00000037485	PRDM12	100	89.532	Cebus_capucinus
ENSGAGG00000014083	PRDM12	94	93.114	ENSCATG00000020327	PRDM12	100	89.532	Cercocebus_atys
ENSGAGG00000014083	PRDM12	94	93.114	ENSCLAG00000005499	PRDM12	92	93.114	Chinchilla_lanigera
ENSGAGG00000014083	PRDM12	94	93.114	ENSCSAG00000014756	PRDM12	100	89.286	Chlorocebus_sabaeus
ENSGAGG00000014083	PRDM12	100	99.718	ENSCPBG00000022628	PRDM12	100	99.718	Chrysemys_picta_bellii
ENSGAGG00000014083	PRDM12	94	93.114	ENSCGRG00001015005	Prdm12	100	88.798	Cricetulus_griseus_chok1gshd
ENSGAGG00000014083	PRDM12	99	78.976	ENSCVAG00000017166	prdm12b	100	79.357	Cyprinodon_variegatus
ENSGAGG00000014083	PRDM12	99	74.872	ENSCVAG00000000944	-	100	75.897	Cyprinodon_variegatus
ENSGAGG00000014083	PRDM12	99	85.792	ENSDARG00000007430	prdm12b	100	85.792	Danio_rerio
ENSGAGG00000014083	PRDM12	94	92.814	ENSDNOG00000042302	PRDM12	99	89.751	Dasypus_novemcinctus
ENSGAGG00000014083	PRDM12	91	62.571	ENSEBUG00000016780	prdm12b	78	64.000	Eptatretus_burgeri
ENSGAGG00000014083	PRDM12	96	93.529	ENSEASG00005008472	PRDM12	100	90.331	Equus_asinus_asinus
ENSGAGG00000014083	PRDM12	96	93.235	ENSECAG00000005933	PRDM12	100	90.055	Equus_caballus
ENSGAGG00000014083	PRDM12	99	83.288	ENSELUG00000009905	prdm12b	100	83.288	Esox_lucius
ENSGAGG00000014083	PRDM12	99	79.444	ENSELUG00000013674	PRDM12	99	79.444	Esox_lucius
ENSGAGG00000014083	PRDM12	94	93.713	ENSFCAG00000043086	PRDM12	100	90.083	Felis_catus
ENSGAGG00000014083	PRDM12	100	97.175	ENSFALG00000001445	PRDM12	89	97.175	Ficedula_albicollis
ENSGAGG00000014083	PRDM12	99	78.610	ENSFHEG00000003944	prdm12b	100	79.255	Fundulus_heteroclitus
ENSGAGG00000014083	PRDM12	99	77.003	ENSFHEG00000007746	-	100	76.744	Fundulus_heteroclitus
ENSGAGG00000014083	PRDM12	99	81.356	ENSGMOG00000011797	prdm12b	99	81.356	Gadus_morhua
ENSGAGG00000014083	PRDM12	100	97.175	ENSGALG00000003895	PRDM12	100	97.175	Gallus_gallus
ENSGAGG00000014083	PRDM12	100	78.042	ENSGAFG00000010827	prdm12b	100	79.365	Gambusia_affinis
ENSGAGG00000014083	PRDM12	100	79.301	ENSGACG00000016713	prdm12b	100	79.301	Gasterosteus_aculeatus
ENSGAGG00000014083	PRDM12	94	92.515	ENSGGOG00000010568	PRDM12	100	88.251	Gorilla_gorilla
ENSGAGG00000014083	PRDM12	99	78.610	ENSHBUG00000022878	prdm12b	100	78.610	Haplochromis_burtoni
ENSGAGG00000014083	PRDM12	99	75.381	ENSHBUG00000022537	-	93	76.142	Haplochromis_burtoni
ENSGAGG00000014083	PRDM12	94	92.216	ENSHGLG00000013939	PRDM12	100	87.945	Heterocephalus_glaber_female
ENSGAGG00000014083	PRDM12	99	74.862	ENSHCOG00000021167	-	100	74.862	Hippocampus_comes
ENSGAGG00000014083	PRDM12	92	80.117	ENSHCOG00000003663	prdm12b	100	73.469	Hippocampus_comes
ENSGAGG00000014083	PRDM12	99	84.511	ENSIPUG00000017053	prdm12b	100	84.783	Ictalurus_punctatus
ENSGAGG00000014083	PRDM12	99	77.198	ENSIPUG00000019544	PRDM12	100	77.198	Ictalurus_punctatus
ENSGAGG00000014083	PRDM12	95	93.491	ENSSTOG00000005986	PRDM12	88	93.491	Ictidomys_tridecemlineatus
ENSGAGG00000014083	PRDM12	93	93.636	ENSJJAG00000005424	Prdm12	100	93.636	Jaculus_jaculus
ENSGAGG00000014083	PRDM12	99	80.112	ENSKMAG00000021205	-	93	83.136	Kryptolebias_marmoratus
ENSGAGG00000014083	PRDM12	99	73.020	ENSKMAG00000016921	prdm12b	100	73.515	Kryptolebias_marmoratus
ENSGAGG00000014083	PRDM12	99	77.513	ENSLBEG00000017769	prdm12b	100	78.042	Labrus_bergylta
ENSGAGG00000014083	PRDM12	99	77.105	ENSLBEG00000007776	-	100	78.421	Labrus_bergylta
ENSGAGG00000014083	PRDM12	99	92.918	ENSLACG00000017560	PRDM12	99	92.918	Latimeria_chalumnae
ENSGAGG00000014083	PRDM12	99	86.777	ENSLOCG00000005429	prdm12b	99	87.328	Lepisosteus_oculatus
ENSGAGG00000014083	PRDM12	94	92.059	ENSLAFG00000006979	PRDM12	93	91.931	Loxodonta_africana
ENSGAGG00000014083	PRDM12	100	86.649	ENSMFAG00000040322	PRDM12	100	88.828	Macaca_fascicularis
ENSGAGG00000014083	PRDM12	94	93.114	ENSMNEG00000037234	PRDM12	100	89.532	Macaca_nemestrina
ENSGAGG00000014083	PRDM12	99	76.804	ENSMAMG00000018988	-	100	76.804	Mastacembelus_armatus
ENSGAGG00000014083	PRDM12	99	78.933	ENSMAMG00000013212	prdm12b	100	79.467	Mastacembelus_armatus
ENSGAGG00000014083	PRDM12	99	75.000	ENSMZEG00005000415	PRDM12	100	75.758	Maylandia_zebra
ENSGAGG00000014083	PRDM12	98	97.126	ENSMGAG00000005438	PRDM12	98	97.126	Meleagris_gallopavo
ENSGAGG00000014083	PRDM12	100	89.041	ENSMAUG00000013040	Prdm12	100	89.041	Mesocricetus_auratus
ENSGAGG00000014083	PRDM12	96	93.255	ENSMICG00000015480	PRDM12	100	90.055	Microcebus_murinus
ENSGAGG00000014083	PRDM12	99	91.453	ENSMOCG00000021026	Prdm12	93	93.255	Microtus_ochrogaster
ENSGAGG00000014083	PRDM12	100	96.338	ENSMODG00000012108	PRDM12	100	96.338	Monodelphis_domestica
ENSGAGG00000014083	PRDM12	99	68.194	ENSMALG00000021901	prdm12b	99	68.194	Monopterus_albus
ENSGAGG00000014083	PRDM12	94	92.814	MGP_CAROLIEiJ_G0023414	Prdm12	100	88.767	Mus_caroli
ENSGAGG00000014083	PRDM12	94	92.814	ENSMUSG00000079466	Prdm12	100	88.767	Mus_musculus
ENSGAGG00000014083	PRDM12	94	92.814	MGP_PahariEiJ_G0024871	Prdm12	100	88.767	Mus_pahari
ENSGAGG00000014083	PRDM12	94	92.814	MGP_SPRETEiJ_G0024331	Prdm12	100	88.767	Mus_spretus
ENSGAGG00000014083	PRDM12	92	93.578	ENSNGAG00000018480	Prdm12	100	89.106	Nannospalax_galili
ENSGAGG00000014083	PRDM12	99	75.549	ENSNBRG00000024312	-	100	76.099	Neolamprologus_brichardi
ENSGAGG00000014083	PRDM12	99	77.984	ENSNBRG00000006727	prdm12b	100	77.984	Neolamprologus_brichardi
ENSGAGG00000014083	PRDM12	100	85.634	ENSMEUG00000003828	PRDM12	100	85.634	Notamacropus_eugenii
ENSGAGG00000014083	PRDM12	93	92.727	ENSOPRG00000008680	PRDM12	100	92.727	Ochotona_princeps
ENSGAGG00000014083	PRDM12	96	92.962	ENSODEG00000016282	PRDM12	64	92.962	Octodon_degus
ENSGAGG00000014083	PRDM12	61	95.392	ENSOANG00000001043	PRDM12	100	95.392	Ornithorhynchus_anatinus
ENSGAGG00000014083	PRDM12	88	88.498	ENSOCUG00000008241	PRDM12	100	88.498	Oryctolagus_cuniculus
ENSGAGG00000014083	PRDM12	99	73.590	ENSORLG00000017558	-	100	75.385	Oryzias_latipes
ENSGAGG00000014083	PRDM12	100	77.045	ENSORLG00000007114	prdm12b	100	77.309	Oryzias_latipes
ENSGAGG00000014083	PRDM12	100	75.591	ENSORLG00020019565	prdm12b	100	76.640	Oryzias_latipes_hni
ENSGAGG00000014083	PRDM12	99	73.402	ENSORLG00020013167	-	100	75.192	Oryzias_latipes_hni
ENSGAGG00000014083	PRDM12	99	73.590	ENSORLG00015003435	-	100	75.385	Oryzias_latipes_hsok
ENSGAGG00000014083	PRDM12	100	75.989	ENSORLG00015007621	prdm12b	100	77.045	Oryzias_latipes_hsok
ENSGAGG00000014083	PRDM12	100	75.718	ENSOMEG00000004134	prdm12b	100	76.501	Oryzias_melastigma
ENSGAGG00000014083	PRDM12	99	77.188	ENSOMEG00000007762	-	100	77.454	Oryzias_melastigma
ENSGAGG00000014083	PRDM12	94	93.694	ENSOGAG00000007557	PRDM12	100	93.694	Otolemur_garnettii
ENSGAGG00000014083	PRDM12	83	90.785	ENSPPAG00000031506	-	99	90.785	Pan_paniscus
ENSGAGG00000014083	PRDM12	100	82.730	ENSPPRG00000023024	PRDM12	92	82.730	Panthera_pardus
ENSGAGG00000014083	PRDM12	94	92.814	ENSPTRG00000043324	-	100	88.525	Pan_troglodytes
ENSGAGG00000014083	PRDM12	94	92.814	ENSPTRG00000021475	PRDM12	100	88.525	Pan_troglodytes
ENSGAGG00000014083	PRDM12	94	93.114	ENSPANG00000025967	PRDM12	100	89.532	Papio_anubis
ENSGAGG00000014083	PRDM12	99	84.677	ENSPKIG00000007228	prdm12b	100	84.946	Paramormyrops_kingsleyae
ENSGAGG00000014083	PRDM12	97	77.684	ENSPKIG00000004305	PRDM12	99	78.063	Paramormyrops_kingsleyae
ENSGAGG00000014083	PRDM12	100	97.740	ENSPSIG00000006739	PRDM12	100	97.740	Pelodiscus_sinensis
ENSGAGG00000014083	PRDM12	99	75.196	ENSPMGG00000002356	-	100	75.196	Periophthalmus_magnuspinnatus
ENSGAGG00000014083	PRDM12	100	79.348	ENSPMGG00000008867	prdm12b	100	79.891	Periophthalmus_magnuspinnatus
ENSGAGG00000014083	PRDM12	94	93.072	ENSPEMG00000009969	Prdm12	96	89.489	Peromyscus_maniculatus_bairdii
ENSGAGG00000014083	PRDM12	100	96.338	ENSPCIG00000024119	PRDM12	100	96.338	Phascolarctos_cinereus
ENSGAGG00000014083	PRDM12	99	80.323	ENSPFOG00000019841	prdm12b	100	80.323	Poecilia_formosa
ENSGAGG00000014083	PRDM12	100	77.428	ENSPLAG00000016626	prdm12b	100	78.740	Poecilia_latipinna
ENSGAGG00000014083	PRDM12	97	77.358	ENSPMEG00000016698	prdm12b	100	78.167	Poecilia_mexicana
ENSGAGG00000014083	PRDM12	100	77.225	ENSPREG00000015073	prdm12b	100	78.796	Poecilia_reticulata
ENSGAGG00000014083	PRDM12	94	77.326	ENSPREG00000003211	-	94	77.326	Poecilia_reticulata
ENSGAGG00000014083	PRDM12	97	91.570	ENSPPYG00000019694	PRDM12	98	91.570	Pongo_abelii
ENSGAGG00000014083	PRDM12	94	93.713	ENSPCOG00000022255	PRDM12	100	89.617	Propithecus_coquereli
ENSGAGG00000014083	PRDM12	94	93.413	ENSPVAG00000001511	PRDM12	100	89.071	Pteropus_vampyrus
ENSGAGG00000014083	PRDM12	99	75.000	ENSPNYG00000013589	-	100	75.758	Pundamilia_nyererei
ENSGAGG00000014083	PRDM12	99	77.926	ENSPNYG00000009607	prdm12b	100	77.926	Pundamilia_nyererei
ENSGAGG00000014083	PRDM12	99	85.054	ENSPNAG00000024532	prdm12b	100	86.413	Pygocentrus_nattereri
ENSGAGG00000014083	PRDM12	99	74.933	ENSPNAG00000013396	PRDM12	100	76.011	Pygocentrus_nattereri
ENSGAGG00000014083	PRDM12	94	92.814	ENSRNOG00000009218	Prdm12	100	88.767	Rattus_norvegicus
ENSGAGG00000014083	PRDM12	90	93.691	ENSRBIG00000042712	PRDM12	98	86.275	Rhinopithecus_bieti
ENSGAGG00000014083	PRDM12	91	93.769	ENSRROG00000043554	PRDM12	100	93.769	Rhinopithecus_roxellana
ENSGAGG00000014083	PRDM12	100	95.506	ENSSHAG00000015972	PRDM12	100	95.506	Sarcophilus_harrisii
ENSGAGG00000014083	PRDM12	99	75.321	ENSSMAG00000003754	prdm12b	100	76.093	Scophthalmus_maximus
ENSGAGG00000014083	PRDM12	96	81.341	ENSSDUG00000019071	-	100	78.329	Seriola_dumerili
ENSGAGG00000014083	PRDM12	99	78.125	ENSSDUG00000023498	prdm12b	100	78.125	Seriola_dumerili
ENSGAGG00000014083	PRDM12	99	78.215	ENSSLDG00000009557	prdm12b	100	78.215	Seriola_lalandi_dorsalis
ENSGAGG00000014083	PRDM12	99	82.303	ENSSLDG00000013562	-	100	82.303	Seriola_lalandi_dorsalis
ENSGAGG00000014083	PRDM12	100	96.893	ENSSPUG00000013424	PRDM12	100	96.893	Sphenodon_punctatus
ENSGAGG00000014083	PRDM12	99	68.912	ENSSPAG00000022420	-	100	69.948	Stegastes_partitus
ENSGAGG00000014083	PRDM12	99	77.690	ENSSPAG00000018824	prdm12b	100	78.740	Stegastes_partitus
ENSGAGG00000014083	PRDM12	94	93.713	ENSSSCG00000005703	PRDM12	100	89.835	Sus_scrofa
ENSGAGG00000014083	PRDM12	99	79.189	ENSTRUG00000018659	prdm12b	100	79.459	Takifugu_rubripes
ENSGAGG00000014083	PRDM12	99	79.224	ENSTRUG00000013239	-	100	79.224	Takifugu_rubripes
ENSGAGG00000014083	PRDM12	99	78.378	ENSTNIG00000009020	prdm12b	99	79.189	Tetraodon_nigroviridis
ENSGAGG00000014083	PRDM12	99	77.374	ENSTNIG00000005859	-	99	77.374	Tetraodon_nigroviridis
ENSGAGG00000014083	PRDM12	94	93.713	ENSUAMG00000009653	PRDM12	94	92.962	Ursus_americanus
ENSGAGG00000014083	PRDM12	94	93.675	ENSVVUG00000027662	PRDM12	79	93.675	Vulpes_vulpes
ENSGAGG00000014083	PRDM12	100	78.457	ENSXCOG00000002836	prdm12b	100	79.521	Xiphophorus_couchianus
ENSGAGG00000014083	PRDM12	99	75.781	ENSXMAG00000028012	-	100	76.302	Xiphophorus_maculatus
ENSGAGG00000014083	PRDM12	99	78.133	ENSXMAG00000005537	prdm12b	100	79.200	Xiphophorus_maculatus