EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000014124 (Gene tree)
Gene ID: -
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 22334 bases
Position: chrPPEB01002631.1:179086-201419
Accession: 2717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000019095	CPSF_A	PF03178.15	2.4e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000021763	DDB1-201	4122	-	ENSGAGP00000019095	1084 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000014124's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000014124's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000014124	DDB1	100	97.694	ENSG00000167986	DDB1	100	98.788	Homo_sapiens
ENSGAGG00000014124	DDB1	98	90.643	ENSAPOG00000005036	ddb1	94	90.693	Acanthochromis_polyacanthus
ENSGAGG00000014124	DDB1	100	97.786	ENSAMEG00000016518	DDB1	95	97.786	Ailuropoda_melanoleuca
ENSGAGG00000014124	DDB1	85	91.017	ENSACIG00000020624	ddb1	94	91.017	Amphilophus_citrinellus
ENSGAGG00000014124	DDB1	100	90.683	ENSAOCG00000003066	ddb1	95	90.683	Amphiprion_ocellaris
ENSGAGG00000014124	DDB1	100	90.775	ENSAPEG00000000092	ddb1	95	90.775	Amphiprion_percula
ENSGAGG00000014124	DDB1	94	91.070	ENSATEG00000020571	ddb1	92	91.070	Anabas_testudineus
ENSGAGG00000014124	DDB1	99	98.065	ENSAPLG00000007174	DDB1	96	98.065	Anas_platyrhynchos
ENSGAGG00000014124	DDB1	100	97.878	ENSACAG00000017758	DDB1	95	97.878	Anolis_carolinensis
ENSGAGG00000014124	DDB1	100	97.694	ENSANAG00000021878	DDB1	95	97.694	Aotus_nancymaae
ENSGAGG00000014124	DDB1	100	91.052	ENSACLG00000012401	ddb1	95	91.052	Astatotilapia_calliptera
ENSGAGG00000014124	DDB1	100	97.786	ENSBTAG00000021569	DDB1	89	97.786	Bos_taurus
ENSGAGG00000014124	DDB1	100	36.927	WBGene00010890	ddb-1	95	36.837	Caenorhabditis_elegans
ENSGAGG00000014124	DDB1	100	97.694	ENSCJAG00000019319	DDB1	95	97.694	Callithrix_jacchus
ENSGAGG00000014124	DDB1	100	97.786	ENSCAFG00000016264	DDB1	95	97.786	Canis_familiaris
ENSGAGG00000014124	DDB1	94	97.645	ENSCAFG00020012722	DDB1	94	97.645	Canis_lupus_dingo
ENSGAGG00000014124	DDB1	100	97.786	ENSCHIG00000014969	DDB1	95	97.786	Capra_hircus
ENSGAGG00000014124	DDB1	100	97.325	ENSTSYG00000008027	DDB1	95	97.325	Carlito_syrichta
ENSGAGG00000014124	DDB1	100	97.140	ENSCAPG00000010786	DDB1	97	97.140	Cavia_aperea
ENSGAGG00000014124	DDB1	100	97.140	ENSCPOG00000009956	DDB1	95	97.140	Cavia_porcellus
ENSGAGG00000014124	DDB1	100	97.694	ENSCCAG00000035883	DDB1	95	97.694	Cebus_capucinus
ENSGAGG00000014124	DDB1	100	95.073	ENSCATG00000044495	DDB1	95	95.073	Cercocebus_atys
ENSGAGG00000014124	DDB1	100	97.232	ENSCLAG00000004126	DDB1	95	97.232	Chinchilla_lanigera
ENSGAGG00000014124	DDB1	100	97.694	ENSCSAG00000006392	DDB1	95	97.694	Chlorocebus_sabaeus
ENSGAGG00000014124	DDB1	87	91.477	ENSCHOG00000011377	DDB1	84	91.477	Choloepus_hoffmanni
ENSGAGG00000014124	DDB1	100	99.908	ENSCPBG00000017728	DDB1	95	99.908	Chrysemys_picta_bellii
ENSGAGG00000014124	DDB1	100	61.314	ENSCING00000007437	-	95	61.223	Ciona_intestinalis
ENSGAGG00000014124	DDB1	99	60.589	ENSCSAVG00000004783	-	100	60.589	Ciona_savignyi
ENSGAGG00000014124	DDB1	100	97.694	ENSCANG00000019948	DDB1	95	97.694	Colobus_angolensis_palliatus
ENSGAGG00000014124	DDB1	100	97.786	ENSCGRG00001016599	Ddb1	95	97.786	Cricetulus_griseus_chok1gshd
ENSGAGG00000014124	DDB1	100	97.786	ENSCGRG00000013427	Ddb1	95	97.786	Cricetulus_griseus_crigri
ENSGAGG00000014124	DDB1	93	90.547	ENSCSEG00000012499	ddb1	94	88.841	Cynoglossus_semilaevis
ENSGAGG00000014124	DDB1	94	90.757	ENSCVAG00000019531	ddb1	94	90.757	Cyprinodon_variegatus
ENSGAGG00000014124	DDB1	100	88.122	ENSDARG00000074431	ddb1	95	88.246	Danio_rerio
ENSGAGG00000014124	DDB1	94	97.350	ENSDNOG00000014884	DDB1	92	97.350	Dasypus_novemcinctus
ENSGAGG00000014124	DDB1	83	98.788	ENSDORG00000000127	Ddb1	94	98.788	Dipodomys_ordii
ENSGAGG00000014124	DDB1	99	60.718	FBgn0260962	pic	95	60.497	Drosophila_melanogaster
ENSGAGG00000014124	DDB1	69	98.990	ENSETEG00000001053	-	66	98.990	Echinops_telfairi
ENSGAGG00000014124	DDB1	77	84.154	ENSEBUG00000014593	ddb1	91	84.154	Eptatretus_burgeri
ENSGAGG00000014124	DDB1	100	97.601	ENSEASG00005008184	DDB1	95	97.601	Equus_asinus_asinus
ENSGAGG00000014124	DDB1	100	97.694	ENSECAG00000012136	DDB1	95	97.694	Equus_caballus
ENSGAGG00000014124	DDB1	83	95.455	ENSEEUG00000003194	DDB1	79	95.455	Erinaceus_europaeus
ENSGAGG00000014124	DDB1	100	90.683	ENSELUG00000023868	ddb1	95	90.683	Esox_lucius
ENSGAGG00000014124	DDB1	100	97.786	ENSFCAG00000029716	DDB1	95	97.786	Felis_catus
ENSGAGG00000014124	DDB1	100	98.068	ENSFALG00000011981	DDB1	95	98.068	Ficedula_albicollis
ENSGAGG00000014124	DDB1	100	97.325	ENSFDAG00000005128	DDB1	95	97.325	Fukomys_damarensis
ENSGAGG00000014124	DDB1	90	91.765	ENSFHEG00000022133	ddb1	93	91.765	Fundulus_heteroclitus
ENSGAGG00000014124	DDB1	83	94.649	ENSGMOG00000019386	ddb1	94	94.649	Gadus_morhua
ENSGAGG00000014124	DDB1	100	98.063	ENSGALG00000042333	DDB1	95	98.063	Gallus_gallus
ENSGAGG00000014124	DDB1	94	90.462	ENSGAFG00000013142	ddb1	94	90.462	Gambusia_affinis
ENSGAGG00000014124	DDB1	95	89.855	ENSGACG00000017182	ddb1	95	89.855	Gasterosteus_aculeatus
ENSGAGG00000014124	DDB1	100	97.694	ENSGGOG00000004052	DDB1	95	97.694	Gorilla_gorilla
ENSGAGG00000014124	DDB1	100	91.052	ENSHBUG00000008873	ddb1	100	91.052	Haplochromis_burtoni
ENSGAGG00000014124	DDB1	100	97.417	ENSHGLG00000018430	DDB1	95	97.417	Heterocephalus_glaber_female
ENSGAGG00000014124	DDB1	100	96.310	ENSHGLG00100014475	DDB1	95	96.310	Heterocephalus_glaber_male
ENSGAGG00000014124	DDB1	94	90.196	ENSHCOG00000018670	ddb1	93	90.196	Hippocampus_comes
ENSGAGG00000014124	DDB1	100	90.221	ENSIPUG00000005612	DDB1	95	90.221	Ictalurus_punctatus
ENSGAGG00000014124	DDB1	100	97.694	ENSSTOG00000007552	DDB1	95	97.694	Ictidomys_tridecemlineatus
ENSGAGG00000014124	DDB1	100	97.694	ENSJJAG00000017769	Ddb1	95	97.694	Jaculus_jaculus
ENSGAGG00000014124	DDB1	94	90.560	ENSKMAG00000002315	ddb1	95	90.560	Kryptolebias_marmoratus
ENSGAGG00000014124	DDB1	85	90.909	ENSLBEG00000017065	ddb1	95	90.909	Labrus_bergylta
ENSGAGG00000014124	DDB1	100	93.738	ENSLACG00000017611	DDB1	95	93.738	Latimeria_chalumnae
ENSGAGG00000014124	DDB1	92	82.595	ENSLOCG00000000012	ddb1	95	82.595	Lepisosteus_oculatus
ENSGAGG00000014124	DDB1	100	97.694	ENSLAFG00000011513	DDB1	95	97.694	Loxodonta_africana
ENSGAGG00000014124	DDB1	100	97.694	ENSMFAG00000042035	DDB1	95	97.694	Macaca_fascicularis
ENSGAGG00000014124	DDB1	99	97.767	ENSMMUG00000002691	DDB1	95	97.767	Macaca_mulatta
ENSGAGG00000014124	DDB1	100	97.694	ENSMNEG00000031559	DDB1	95	97.694	Macaca_nemestrina
ENSGAGG00000014124	DDB1	100	97.694	ENSMLEG00000044136	DDB1	95	97.694	Mandrillus_leucophaeus
ENSGAGG00000014124	DDB1	100	91.144	ENSMAMG00000014372	ddb1	95	91.144	Mastacembelus_armatus
ENSGAGG00000014124	DDB1	100	90.959	ENSMZEG00005013835	ddb1	95	90.959	Maylandia_zebra
ENSGAGG00000014124	DDB1	99	97.672	ENSMGAG00000004990	DDB1	100	97.672	Meleagris_gallopavo
ENSGAGG00000014124	DDB1	100	97.786	ENSMAUG00000012926	Ddb1	95	97.786	Mesocricetus_auratus
ENSGAGG00000014124	DDB1	100	97.694	ENSMICG00000013703	DDB1	95	97.694	Microcebus_murinus
ENSGAGG00000014124	DDB1	100	97.509	ENSMOCG00000020499	Ddb1	95	97.509	Microtus_ochrogaster
ENSGAGG00000014124	DDB1	85	90.801	ENSMMOG00000001758	ddb1	94	90.801	Mola_mola
ENSGAGG00000014124	DDB1	100	87.909	ENSMODG00000020353	DDB1	95	87.909	Monodelphis_domestica
ENSGAGG00000014124	DDB1	100	91.052	ENSMALG00000014071	ddb1	95	91.052	Monopterus_albus
ENSGAGG00000014124	DDB1	100	97.786	MGP_CAROLIEiJ_G0022695	Ddb1	95	97.786	Mus_caroli
ENSGAGG00000014124	DDB1	100	97.694	ENSMUSG00000024740	Ddb1	95	97.694	Mus_musculus
ENSGAGG00000014124	DDB1	100	97.786	MGP_PahariEiJ_G0014189	Ddb1	95	97.786	Mus_pahari
ENSGAGG00000014124	DDB1	100	97.786	MGP_SPRETEiJ_G0023609	Ddb1	95	97.786	Mus_spretus
ENSGAGG00000014124	DDB1	100	94.373	ENSMPUG00000014200	DDB1	95	94.373	Mustela_putorius_furo
ENSGAGG00000014124	DDB1	100	97.694	ENSMLUG00000013232	DDB1	95	97.694	Myotis_lucifugus
ENSGAGG00000014124	DDB1	100	97.509	ENSNGAG00000009384	Ddb1	95	97.509	Nannospalax_galili
ENSGAGG00000014124	DDB1	100	91.144	ENSNBRG00000019581	ddb1	95	91.144	Neolamprologus_brichardi
ENSGAGG00000014124	DDB1	100	94.434	ENSNLEG00000002022	DDB1	95	94.434	Nomascus_leucogenys
ENSGAGG00000014124	DDB1	91	97.887	ENSMEUG00000001099	DDB1	88	97.887	Notamacropus_eugenii
ENSGAGG00000014124	DDB1	95	89.331	ENSOPRG00000008254	DDB1	90	89.331	Ochotona_princeps
ENSGAGG00000014124	DDB1	100	96.956	ENSODEG00000002419	DDB1	95	96.956	Octodon_degus
ENSGAGG00000014124	DDB1	100	91.052	ENSONIG00000005804	ddb1	95	91.052	Oreochromis_niloticus
ENSGAGG00000014124	DDB1	95	98.062	ENSOANG00000004897	DDB1	100	98.062	Ornithorhynchus_anatinus
ENSGAGG00000014124	DDB1	100	97.694	ENSOCUG00000001667	DDB1	95	97.694	Oryctolagus_cuniculus
ENSGAGG00000014124	DDB1	95	89.179	ENSORLG00000001399	ddb1	93	90.457	Oryzias_latipes
ENSGAGG00000014124	DDB1	95	89.082	ENSORLG00020001277	ddb1	92	89.082	Oryzias_latipes_hni
ENSGAGG00000014124	DDB1	94	90.285	ENSORLG00015002080	ddb1	93	90.285	Oryzias_latipes_hsok
ENSGAGG00000014124	DDB1	96	89.049	ENSOMEG00000006181	ddb1	94	89.049	Oryzias_melastigma
ENSGAGG00000014124	DDB1	100	97.786	ENSOGAG00000016103	DDB1	95	97.786	Otolemur_garnettii
ENSGAGG00000014124	DDB1	98	97.938	ENSOARG00000011716	DDB1	93	97.938	Ovis_aries
ENSGAGG00000014124	DDB1	100	97.694	ENSPPAG00000035343	DDB1	95	97.694	Pan_paniscus
ENSGAGG00000014124	DDB1	100	97.786	ENSPPRG00000013300	DDB1	95	97.786	Panthera_pardus
ENSGAGG00000014124	DDB1	100	97.786	ENSPTIG00000006909	DDB1	95	97.786	Panthera_tigris_altaica
ENSGAGG00000014124	DDB1	100	97.694	ENSPTRG00000003737	DDB1	95	97.694	Pan_troglodytes
ENSGAGG00000014124	DDB1	100	97.694	ENSPANG00000000242	DDB1	95	97.694	Papio_anubis
ENSGAGG00000014124	DDB1	94	90.757	ENSPKIG00000019213	ddb1	89	90.757	Paramormyrops_kingsleyae
ENSGAGG00000014124	DDB1	100	99.263	ENSPSIG00000013275	DDB1	97	99.263	Pelodiscus_sinensis
ENSGAGG00000014124	DDB1	85	90.693	ENSPMGG00000021179	ddb1	94	90.693	Periophthalmus_magnuspinnatus
ENSGAGG00000014124	DDB1	100	97.786	ENSPEMG00000012241	Ddb1	95	97.786	Peromyscus_maniculatus_bairdii
ENSGAGG00000014124	DDB1	91	86.049	ENSPMAG00000008479	ddb1	96	86.049	Petromyzon_marinus
ENSGAGG00000014124	DDB1	100	98.155	ENSPCIG00000002643	DDB1	95	98.155	Phascolarctos_cinereus
ENSGAGG00000014124	DDB1	100	90.415	ENSPFOG00000002768	ddb1	95	90.415	Poecilia_formosa
ENSGAGG00000014124	DDB1	100	90.221	ENSPLAG00000017227	ddb1	95	90.221	Poecilia_latipinna
ENSGAGG00000014124	DDB1	100	90.221	ENSPMEG00000011398	ddb1	95	90.221	Poecilia_mexicana
ENSGAGG00000014124	DDB1	94	90.579	ENSPREG00000004440	ddb1	92	90.579	Poecilia_reticulata
ENSGAGG00000014124	DDB1	100	92.569	ENSPPYG00000003193	DDB1	95	92.569	Pongo_abelii
ENSGAGG00000014124	DDB1	83	97.164	ENSPCAG00000011040	DDB1	79	97.164	Procavia_capensis
ENSGAGG00000014124	DDB1	100	96.133	ENSPCOG00000015176	DDB1	95	96.133	Propithecus_coquereli
ENSGAGG00000014124	DDB1	100	97.601	ENSPVAG00000003847	DDB1	95	97.601	Pteropus_vampyrus
ENSGAGG00000014124	DDB1	51	90.391	ENSPNYG00000010482	ddb1	100	90.391	Pundamilia_nyererei
ENSGAGG00000014124	DDB1	94	90.757	ENSPNAG00000006635	ddb1	92	90.757	Pygocentrus_nattereri
ENSGAGG00000014124	DDB1	100	97.694	ENSRNOG00000020715	Ddb1	95	97.694	Rattus_norvegicus
ENSGAGG00000014124	DDB1	100	97.694	ENSRBIG00000033611	DDB1	95	97.767	Rhinopithecus_bieti
ENSGAGG00000014124	DDB1	100	97.694	ENSRROG00000041407	DDB1	95	97.694	Rhinopithecus_roxellana
ENSGAGG00000014124	DDB1	100	97.786	ENSSBOG00000019775	DDB1	95	97.786	Saimiri_boliviensis_boliviensis
ENSGAGG00000014124	DDB1	99	96.262	ENSSHAG00000011600	DDB1	100	96.262	Sarcophilus_harrisii
ENSGAGG00000014124	DDB1	94	90.980	ENSSFOG00015011151	ddb1	92	90.980	Scleropages_formosus
ENSGAGG00000014124	DDB1	100	90.590	ENSSMAG00000009495	ddb1	95	90.590	Scophthalmus_maximus
ENSGAGG00000014124	DDB1	100	90.959	ENSSDUG00000004642	ddb1	95	90.959	Seriola_dumerili
ENSGAGG00000014124	DDB1	100	90.959	ENSSLDG00000015804	ddb1	95	90.959	Seriola_lalandi_dorsalis
ENSGAGG00000014124	DDB1	67	99.115	ENSSARG00000003290	-	66	99.115	Sorex_araneus
ENSGAGG00000014124	DDB1	100	99.077	ENSSPUG00000019338	DDB1	95	99.077	Sphenodon_punctatus
ENSGAGG00000014124	DDB1	94	90.873	ENSSPAG00000009888	ddb1	94	90.873	Stegastes_partitus
ENSGAGG00000014124	DDB1	100	96.771	ENSSSCG00000013094	DDB1	95	96.771	Sus_scrofa
ENSGAGG00000014124	DDB1	100	97.878	ENSTGUG00000006414	DDB1	95	97.878	Taeniopygia_guttata
ENSGAGG00000014124	DDB1	94	89.479	ENSTRUG00000016682	ddb1	93	89.479	Takifugu_rubripes
ENSGAGG00000014124	DDB1	92	85.030	ENSTNIG00000009565	ddb1	99	85.030	Tetraodon_nigroviridis
ENSGAGG00000014124	DDB1	94	92.689	ENSTTRG00000011055	DDB1	91	92.689	Tursiops_truncatus
ENSGAGG00000014124	DDB1	94	97.645	ENSUAMG00000017793	DDB1	89	97.645	Ursus_americanus
ENSGAGG00000014124	DDB1	94	97.645	ENSUMAG00000011788	DDB1	93	97.645	Ursus_maritimus
ENSGAGG00000014124	DDB1	91	97.059	ENSVPAG00000007963	DDB1	88	97.059	Vicugna_pacos
ENSGAGG00000014124	DDB1	100	97.694	ENSVVUG00000004987	DDB1	95	97.694	Vulpes_vulpes
ENSGAGG00000014124	DDB1	100	92.647	ENSXETG00000008820	ddb1	95	92.647	Xenopus_tropicalis
ENSGAGG00000014124	DDB1	85	90.476	ENSXCOG00000013956	ddb1	94	90.476	Xiphophorus_couchianus
ENSGAGG00000014124	DDB1	94	90.462	ENSXMAG00000000022	ddb1	94	90.462	Xiphophorus_maculatus