EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000014132 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 252 bases
Position: chrPPEB01004819.1:30015-30266
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000019106	LSM	PF01423.22	3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000021774	-	252	-	ENSGAGP00000019106	83 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000014132's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000014132's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000014132	-	75	90.323	ENSGAGG00000020974	-	54	87.500
ENSGAGG00000014132	-	81	76.119	ENSGAGG00000012945	-	63	84.058
ENSGAGG00000014132	-	87	34.722	ENSGAGG00000020980	LSM6	79	38.095
ENSGAGG00000014132	-	90	73.333	ENSGAGG00000022991	-	72	86.885
ENSGAGG00000014132	-	59	75.510	ENSGAGG00000014834	-	83	75.510
ENSGAGG00000014132	-	52	86.047	ENSGAGG00000011163	-	75	86.047

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000014132	-	83	86.957	ENSG00000139343	SNRPF	80	86.957	Homo_sapiens
ENSGAGG00000014132	-	82	83.824	ENSAPOG00000003377	snrpf	53	83.824	Acanthochromis_polyacanthus
ENSGAGG00000014132	-	82	77.941	ENSAMEG00000018718	-	79	77.941	Ailuropoda_melanoleuca
ENSGAGG00000014132	-	82	86.765	ENSAMEG00000002166	-	80	86.765	Ailuropoda_melanoleuca
ENSGAGG00000014132	-	81	83.582	ENSACIG00000013216	snrpf	79	83.582	Amphilophus_citrinellus
ENSGAGG00000014132	-	81	83.582	ENSAOCG00000015108	snrpf	79	83.582	Amphiprion_ocellaris
ENSGAGG00000014132	-	81	83.582	ENSAPEG00000022022	snrpf	79	83.582	Amphiprion_percula
ENSGAGG00000014132	-	81	83.582	ENSATEG00000022625	snrpf	72	83.582	Anabas_testudineus
ENSGAGG00000014132	-	82	85.294	ENSACAG00000014073	SNRPF	78	85.294	Anolis_carolinensis
ENSGAGG00000014132	-	81	62.687	ENSANAG00000025860	-	74	62.687	Aotus_nancymaae
ENSGAGG00000014132	-	82	77.941	ENSANAG00000020297	-	62	77.941	Aotus_nancymaae
ENSGAGG00000014132	-	83	86.957	ENSANAG00000032845	SNRPF	80	86.957	Aotus_nancymaae
ENSGAGG00000014132	-	81	83.582	ENSACLG00000016066	snrpf	79	83.582	Astatotilapia_calliptera
ENSGAGG00000014132	-	83	82.609	ENSAMXG00000007421	snrpf	80	82.609	Astyanax_mexicanus
ENSGAGG00000014132	-	94	75.641	ENSBTAG00000050012	-	85	82.609	Bos_taurus
ENSGAGG00000014132	-	83	86.957	ENSBTAG00000016271	SNRPF	80	86.957	Bos_taurus
ENSGAGG00000014132	-	78	64.615	WBGene00004918	snr-5	76	64.615	Caenorhabditis_elegans
ENSGAGG00000014132	-	83	86.957	ENSCJAG00000002705	-	80	86.957	Callithrix_jacchus
ENSGAGG00000014132	-	83	78.261	ENSCAFG00000031151	-	80	78.261	Canis_familiaris
ENSGAGG00000014132	-	83	86.957	ENSCAFG00000006395	-	62	86.957	Canis_familiaris
ENSGAGG00000014132	-	83	78.261	ENSCAFG00020010823	-	80	78.261	Canis_lupus_dingo
ENSGAGG00000014132	-	94	74.359	ENSCAFG00020013161	-	68	84.375	Canis_lupus_dingo
ENSGAGG00000014132	-	83	81.429	ENSTSYG00000036502	-	80	81.429	Carlito_syrichta
ENSGAGG00000014132	-	83	73.913	ENSTSYG00000030635	-	80	73.913	Carlito_syrichta
ENSGAGG00000014132	-	96	72.289	ENSTSYG00000031636	-	56	83.582	Carlito_syrichta
ENSGAGG00000014132	-	82	86.765	ENSCAPG00000007242	SNRPF	80	86.765	Cavia_aperea
ENSGAGG00000014132	-	83	86.957	ENSCPOG00000013898	SNRPF	80	86.957	Cavia_porcellus
ENSGAGG00000014132	-	83	86.957	ENSCCAG00000037378	-	80	86.957	Cebus_capucinus
ENSGAGG00000014132	-	95	72.152	ENSCCAG00000033627	-	54	78.261	Cebus_capucinus
ENSGAGG00000014132	-	83	86.957	ENSCCAG00000017356	-	80	86.957	Cebus_capucinus
ENSGAGG00000014132	-	83	86.957	ENSCLAG00000007200	SNRPF	80	86.957	Chinchilla_lanigera
ENSGAGG00000014132	-	83	86.957	ENSCSAG00000003602	-	56	86.957	Chlorocebus_sabaeus
ENSGAGG00000014132	-	77	90.625	ENSCHOG00000009392	SNRPF	100	90.625	Choloepus_hoffmanni
ENSGAGG00000014132	-	83	82.609	ENSCPBG00000006227	-	80	82.609	Chrysemys_picta_bellii
ENSGAGG00000014132	-	94	78.205	ENSCPBG00000024287	-	57	83.099	Chrysemys_picta_bellii
ENSGAGG00000014132	-	96	78.750	ENSCPBG00000026463	-	78	86.567	Chrysemys_picta_bellii
ENSGAGG00000014132	-	95	74.684	ENSCPBG00000001985	-	82	82.609	Chrysemys_picta_bellii
ENSGAGG00000014132	-	82	77.941	ENSCSAVG00000007498	-	77	77.941	Ciona_savignyi
ENSGAGG00000014132	-	83	78.261	ENSCGRG00001008965	-	54	78.261	Cricetulus_griseus_chok1gshd
ENSGAGG00000014132	-	83	86.957	ENSCGRG00001017100	-	80	86.957	Cricetulus_griseus_chok1gshd
ENSGAGG00000014132	-	83	86.957	ENSCGRG00000000336	-	80	86.957	Cricetulus_griseus_crigri
ENSGAGG00000014132	-	96	71.250	ENSCGRG00000018878	-	86	78.261	Cricetulus_griseus_crigri
ENSGAGG00000014132	-	83	82.609	ENSCSEG00000004748	snrpf	80	82.609	Cynoglossus_semilaevis
ENSGAGG00000014132	-	82	83.824	ENSCVAG00000000397	snrpf	54	83.824	Cyprinodon_variegatus
ENSGAGG00000014132	-	83	81.690	ENSDARG00000105037	snrpf	81	81.690	Danio_rerio
ENSGAGG00000014132	-	83	85.507	ENSDNOG00000048989	-	62	85.507	Dasypus_novemcinctus
ENSGAGG00000014132	-	83	73.913	ENSDNOG00000049373	-	60	73.913	Dasypus_novemcinctus
ENSGAGG00000014132	-	83	75.362	ENSDORG00000025351	-	96	75.362	Dipodomys_ordii
ENSGAGG00000014132	-	81	74.627	ENSDORG00000029740	-	79	74.627	Dipodomys_ordii
ENSGAGG00000014132	-	82	69.118	FBgn0000426	SmF	76	70.149	Drosophila_melanogaster
ENSGAGG00000014132	-	83	86.957	ENSETEG00000001558	-	80	86.957	Echinops_telfairi
ENSGAGG00000014132	-	90	72.727	ENSEBUG00000001793	-	69	79.688	Eptatretus_burgeri
ENSGAGG00000014132	-	83	86.957	ENSECAG00000019817	SNRPF	56	86.957	Equus_caballus
ENSGAGG00000014132	-	82	86.765	ENSEEUG00000013509	SNRPF	80	86.765	Erinaceus_europaeus
ENSGAGG00000014132	-	83	81.159	ENSELUG00000007737	RUXF	79	81.159	Esox_lucius
ENSGAGG00000014132	-	83	81.159	ENSELUG00000003121	RUXF	80	81.159	Esox_lucius
ENSGAGG00000014132	-	83	66.667	ENSFCAG00000031148	-	63	66.667	Felis_catus
ENSGAGG00000014132	-	76	71.429	ENSFCAG00000021942	-	77	71.429	Felis_catus
ENSGAGG00000014132	-	83	86.957	ENSFCAG00000029966	-	80	86.957	Felis_catus
ENSGAGG00000014132	-	82	86.765	ENSFALG00000010799	SNRPF	79	86.765	Ficedula_albicollis
ENSGAGG00000014132	-	83	86.957	ENSFDAG00000002831	-	80	86.957	Fukomys_damarensis
ENSGAGG00000014132	-	82	83.824	ENSFHEG00000003240	snrpf	60	83.824	Fundulus_heteroclitus
ENSGAGG00000014132	-	82	83.824	ENSGMOG00000007741	snrpf	80	83.824	Gadus_morhua
ENSGAGG00000014132	-	83	86.957	ENSGALG00000011409	SNRPF	80	86.957	Gallus_gallus
ENSGAGG00000014132	-	81	83.582	ENSGAFG00000016187	snrpf	77	83.582	Gambusia_affinis
ENSGAGG00000014132	-	82	82.353	ENSGACG00000020055	snrpf	80	82.353	Gasterosteus_aculeatus
ENSGAGG00000014132	-	83	66.667	ENSGGOG00000039936	-	76	66.667	Gorilla_gorilla
ENSGAGG00000014132	-	83	86.957	ENSGGOG00000001127	-	80	86.957	Gorilla_gorilla
ENSGAGG00000014132	-	95	56.962	ENSGGOG00000039564	-	82	60.870	Gorilla_gorilla
ENSGAGG00000014132	-	83	85.507	ENSHGLG00000021172	-	80	85.507	Heterocephalus_glaber_female
ENSGAGG00000014132	-	83	86.957	ENSHGLG00000009108	SNRPF	80	86.957	Heterocephalus_glaber_female
ENSGAGG00000014132	-	82	86.765	ENSHGLG00100008103	-	80	86.765	Heterocephalus_glaber_male
ENSGAGG00000014132	-	83	85.507	ENSHGLG00100019596	-	80	85.507	Heterocephalus_glaber_male
ENSGAGG00000014132	-	88	68.750	ENSHCOG00000018663	snrpf	61	70.513	Hippocampus_comes
ENSGAGG00000014132	-	83	84.058	ENSIPUG00000018994	snrpf	80	84.058	Ictalurus_punctatus
ENSGAGG00000014132	-	83	86.957	ENSSTOG00000010434	-	80	86.957	Ictidomys_tridecemlineatus
ENSGAGG00000014132	-	95	67.089	ENSJJAG00000004558	-	82	73.913	Jaculus_jaculus
ENSGAGG00000014132	-	100	71.429	ENSJJAG00000010502	-	82	79.710	Jaculus_jaculus
ENSGAGG00000014132	-	83	86.957	ENSJJAG00000011272	-	80	86.957	Jaculus_jaculus
ENSGAGG00000014132	-	72	73.333	ENSJJAG00000004828	-	77	84.000	Jaculus_jaculus
ENSGAGG00000014132	-	83	82.609	ENSKMAG00000013566	snrpf	80	82.609	Kryptolebias_marmoratus
ENSGAGG00000014132	-	83	82.609	ENSLBEG00000008800	snrpf	80	82.609	Labrus_bergylta
ENSGAGG00000014132	-	83	85.507	ENSLACG00000002456	-	59	85.507	Latimeria_chalumnae
ENSGAGG00000014132	-	83	81.159	ENSLOCG00000015744	snrpf	80	81.159	Lepisosteus_oculatus
ENSGAGG00000014132	-	82	86.765	ENSLAFG00000017426	SNRPF	79	86.765	Loxodonta_africana
ENSGAGG00000014132	-	81	82.090	ENSMAMG00000016593	snrpf	79	82.090	Mastacembelus_armatus
ENSGAGG00000014132	-	81	83.582	ENSMZEG00005014701	snrpf	79	83.582	Maylandia_zebra
ENSGAGG00000014132	-	82	85.294	ENSMGAG00000011453	-	60	86.567	Meleagris_gallopavo
ENSGAGG00000014132	-	93	55.422	ENSMAUG00000010289	-	82	63.768	Mesocricetus_auratus
ENSGAGG00000014132	-	83	81.159	ENSMAUG00000008799	-	80	81.159	Mesocricetus_auratus
ENSGAGG00000014132	-	69	87.719	ENSMAUG00000016909	-	77	87.719	Mesocricetus_auratus
ENSGAGG00000014132	-	69	87.719	ENSMAUG00000019737	-	77	87.719	Mesocricetus_auratus
ENSGAGG00000014132	-	83	86.957	ENSMICG00000012153	-	80	86.957	Microcebus_murinus
ENSGAGG00000014132	-	82	82.353	ENSMICG00000030494	-	54	82.353	Microcebus_murinus
ENSGAGG00000014132	-	73	78.689	ENSMOCG00000020220	-	77	80.000	Microtus_ochrogaster
ENSGAGG00000014132	-	83	72.464	ENSMOCG00000022166	-	76	72.464	Microtus_ochrogaster
ENSGAGG00000014132	-	83	86.957	ENSMOCG00000020437	Snrpf	80	86.957	Microtus_ochrogaster
ENSGAGG00000014132	-	82	83.824	ENSMMOG00000007127	snrpf	80	83.824	Mola_mola
ENSGAGG00000014132	-	83	86.957	ENSMODG00000008091	SNRPF	61	86.957	Monodelphis_domestica
ENSGAGG00000014132	-	81	83.582	ENSMALG00000012328	snrpf	79	83.582	Monopterus_albus
ENSGAGG00000014132	-	83	86.957	MGP_CAROLIEiJ_G0015735	-	80	86.957	Mus_caroli
ENSGAGG00000014132	-	83	86.957	ENSMUSG00000020018	Snrpf	80	86.957	Mus_musculus
ENSGAGG00000014132	-	83	86.957	MGP_PahariEiJ_G0031350	Snrpf	80	86.957	Mus_pahari
ENSGAGG00000014132	-	83	86.957	MGP_SPRETEiJ_G0016553	Snrpf	80	86.957	Mus_spretus
ENSGAGG00000014132	-	83	86.957	ENSMPUG00000007176	-	62	86.957	Mustela_putorius_furo
ENSGAGG00000014132	-	83	72.464	ENSMLUG00000026269	-	65	72.464	Myotis_lucifugus
ENSGAGG00000014132	-	82	86.765	ENSMLUG00000013577	-	80	86.765	Myotis_lucifugus
ENSGAGG00000014132	-	83	86.957	ENSMLUG00000029201	-	65	86.957	Myotis_lucifugus
ENSGAGG00000014132	-	83	86.957	ENSMLUG00000027932	-	65	86.957	Myotis_lucifugus
ENSGAGG00000014132	-	83	86.957	ENSMLUG00000026149	-	65	86.957	Myotis_lucifugus
ENSGAGG00000014132	-	64	79.245	ENSNGAG00000005851	-	62	79.245	Nannospalax_galili
ENSGAGG00000014132	-	83	86.957	ENSNGAG00000024292	-	80	86.957	Nannospalax_galili
ENSGAGG00000014132	-	82	83.824	ENSNBRG00000011682	snrpf	69	83.824	Neolamprologus_brichardi
ENSGAGG00000014132	-	83	86.957	ENSODEG00000010328	-	80	86.957	Octodon_degus
ENSGAGG00000014132	-	83	85.507	ENSOCUG00000010925	SNRPF	61	85.507	Oryctolagus_cuniculus
ENSGAGG00000014132	-	82	82.353	ENSORLG00020008216	snrpf	80	82.353	Oryzias_latipes_hni
ENSGAGG00000014132	-	82	82.353	ENSORLG00015007418	snrpf	80	82.353	Oryzias_latipes_hsok
ENSGAGG00000014132	-	81	82.090	ENSOMEG00000003018	snrpf	79	82.090	Oryzias_melastigma
ENSGAGG00000014132	-	83	85.507	ENSOGAG00000030323	-	80	85.507	Otolemur_garnettii
ENSGAGG00000014132	-	83	86.957	ENSOARG00000011853	-	60	86.957	Ovis_aries
ENSGAGG00000014132	-	83	68.116	ENSPPAG00000037544	-	76	68.116	Pan_paniscus
ENSGAGG00000014132	-	95	59.494	ENSPPAG00000037479	-	82	63.768	Pan_paniscus
ENSGAGG00000014132	-	83	86.957	ENSPPRG00000005875	-	80	86.957	Panthera_pardus
ENSGAGG00000014132	-	94	60.494	ENSPPRG00000007449	-	70	66.667	Panthera_pardus
ENSGAGG00000014132	-	83	66.667	ENSPTIG00000005117	-	82	66.667	Panthera_tigris_altaica
ENSGAGG00000014132	-	83	86.957	ENSPTIG00000007520	SNRPF	80	86.957	Panthera_tigris_altaica
ENSGAGG00000014132	-	95	56.962	ENSPTRG00000047717	-	82	60.870	Pan_troglodytes
ENSGAGG00000014132	-	83	68.116	ENSPTRG00000043814	-	76	68.116	Pan_troglodytes
ENSGAGG00000014132	-	82	83.824	ENSPKIG00000014784	snrpf	75	83.824	Paramormyrops_kingsleyae
ENSGAGG00000014132	-	82	86.765	ENSPSIG00000016462	SNRPF	79	86.765	Pelodiscus_sinensis
ENSGAGG00000014132	-	82	83.824	ENSPMGG00000023548	snrpf	80	83.824	Periophthalmus_magnuspinnatus
ENSGAGG00000014132	-	83	86.957	ENSPEMG00000023326	Snrpf	80	86.957	Peromyscus_maniculatus_bairdii
ENSGAGG00000014132	-	81	83.582	ENSPLAG00000023932	snrpf	79	83.582	Poecilia_latipinna
ENSGAGG00000014132	-	81	83.582	ENSPMEG00000003377	snrpf	79	83.582	Poecilia_mexicana
ENSGAGG00000014132	-	81	83.582	ENSPREG00000022635	snrpf	77	83.582	Poecilia_reticulata
ENSGAGG00000014132	-	83	86.957	ENSPPYG00000004847	-	80	86.957	Pongo_abelii
ENSGAGG00000014132	-	83	86.957	ENSPCOG00000023833	-	80	86.957	Propithecus_coquereli
ENSGAGG00000014132	-	83	86.957	ENSPVAG00000009036	SNRPF	80	86.957	Pteropus_vampyrus
ENSGAGG00000014132	-	81	83.582	ENSPNYG00000021712	snrpf	79	83.582	Pundamilia_nyererei
ENSGAGG00000014132	-	81	82.090	ENSPNAG00000019117	snrpf	79	82.090	Pygocentrus_nattereri
ENSGAGG00000014132	-	83	86.957	ENSRNOG00000005556	Snrpf	80	86.957	Rattus_norvegicus
ENSGAGG00000014132	-	83	84.058	ENSRBIG00000030414	-	80	84.058	Rhinopithecus_bieti
ENSGAGG00000014132	-	83	84.058	ENSRROG00000021975	-	80	84.058	Rhinopithecus_roxellana
ENSGAGG00000014132	-	78	48.485	YPR182W	SMX3	77	48.485	Saccharomyces_cerevisiae
ENSGAGG00000014132	-	83	69.444	ENSSBOG00000027638	-	81	69.444	Saimiri_boliviensis_boliviensis
ENSGAGG00000014132	-	83	86.957	ENSSBOG00000012868	-	80	86.957	Saimiri_boliviensis_boliviensis
ENSGAGG00000014132	-	83	86.957	ENSSBOG00000036179	-	80	86.957	Saimiri_boliviensis_boliviensis
ENSGAGG00000014132	-	83	75.362	ENSSBOG00000032297	-	78	75.362	Saimiri_boliviensis_boliviensis
ENSGAGG00000014132	-	82	86.765	ENSSHAG00000012294	SNRPF	61	86.765	Sarcophilus_harrisii
ENSGAGG00000014132	-	77	85.938	ENSSFOG00015021523	snrpf	96	85.938	Scleropages_formosus
ENSGAGG00000014132	-	83	81.159	ENSSMAG00000005533	snrpf	79	81.159	Scophthalmus_maximus
ENSGAGG00000014132	-	78	86.154	ENSSDUG00000016283	snrpf	77	86.154	Seriola_dumerili
ENSGAGG00000014132	-	93	60.000	ENSSLDG00000003885	-	83	64.706	Seriola_lalandi_dorsalis
ENSGAGG00000014132	-	83	82.609	ENSSLDG00000005119	snrpf	80	82.609	Seriola_lalandi_dorsalis
ENSGAGG00000014132	-	81	86.567	ENSSPUG00000014590	-	79	86.567	Sphenodon_punctatus
ENSGAGG00000014132	-	82	83.824	ENSSPAG00000003283	snrpf	77	83.824	Stegastes_partitus
ENSGAGG00000014132	-	83	86.957	ENSSSCG00000000895	SNRPF	80	86.957	Sus_scrofa
ENSGAGG00000014132	-	61	82.353	ENSTRUG00000014956	snrpf	74	82.353	Takifugu_rubripes
ENSGAGG00000014132	-	83	82.609	ENSTNIG00000012672	snrpf	80	82.609	Tetraodon_nigroviridis
ENSGAGG00000014132	-	52	86.047	ENSTTRG00000006070	SNRPF	50	86.047	Tursiops_truncatus
ENSGAGG00000014132	-	83	86.957	ENSUAMG00000008176	-	92	81.944	Ursus_americanus
ENSGAGG00000014132	-	100	68.235	ENSUAMG00000001101	-	81	76.812	Ursus_americanus
ENSGAGG00000014132	-	83	76.812	ENSUMAG00000006177	-	81	76.812	Ursus_maritimus
ENSGAGG00000014132	-	83	86.957	ENSUMAG00000003528	-	79	89.231	Ursus_maritimus
ENSGAGG00000014132	-	83	86.957	ENSVPAG00000008712	-	80	86.957	Vicugna_pacos
ENSGAGG00000014132	-	94	71.795	ENSVVUG00000023821	-	88	78.261	Vulpes_vulpes
ENSGAGG00000014132	-	82	60.000	ENSXETG00000021630	snrpf	80	60.000	Xenopus_tropicalis
ENSGAGG00000014132	-	81	83.582	ENSXCOG00000013860	snrpf	77	83.582	Xiphophorus_couchianus
ENSGAGG00000014132	-	81	83.582	ENSXMAG00000015448	snrpf	79	83.582	Xiphophorus_maculatus