EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000014356 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 11578 bases
Position: chrPPEB01008874.1:17971-29548
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000019470	zf-C2H2	PF00096.26	3.5e-64	1	10
ENSGAGP00000019470	zf-C2H2	PF00096.26	3.5e-64	2	10
ENSGAGP00000019470	zf-C2H2	PF00096.26	3.5e-64	3	10
ENSGAGP00000019470	zf-C2H2	PF00096.26	3.5e-64	4	10
ENSGAGP00000019470	zf-C2H2	PF00096.26	3.5e-64	5	10
ENSGAGP00000019470	zf-C2H2	PF00096.26	3.5e-64	6	10
ENSGAGP00000019470	zf-C2H2	PF00096.26	3.5e-64	7	10
ENSGAGP00000019470	zf-C2H2	PF00096.26	3.5e-64	8	10
ENSGAGP00000019470	zf-C2H2	PF00096.26	3.5e-64	9	10
ENSGAGP00000019470	zf-C2H2	PF00096.26	3.5e-64	10	10
ENSGAGP00000019468	zf-C2H2	PF00096.26	2.4e-58	1	9
ENSGAGP00000019468	zf-C2H2	PF00096.26	2.4e-58	2	9
ENSGAGP00000019468	zf-C2H2	PF00096.26	2.4e-58	3	9
ENSGAGP00000019468	zf-C2H2	PF00096.26	2.4e-58	4	9
ENSGAGP00000019468	zf-C2H2	PF00096.26	2.4e-58	5	9
ENSGAGP00000019468	zf-C2H2	PF00096.26	2.4e-58	6	9
ENSGAGP00000019468	zf-C2H2	PF00096.26	2.4e-58	7	9
ENSGAGP00000019468	zf-C2H2	PF00096.26	2.4e-58	8	9
ENSGAGP00000019468	zf-C2H2	PF00096.26	2.4e-58	9	9
ENSGAGP00000019470	zf-met	PF12874.7	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000022170	-	1173	-	ENSGAGP00000019468	390 (aa)	-	-
ENSGAGT00000022172	-	1632	-	ENSGAGP00000019470	543 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000014356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000014356's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000014356	-	97	61.592	ENSGAGG00000002214	-	99	61.832
ENSGAGG00000014356	-	76	37.647	ENSGAGG00000020362	PRDM5	81	34.868
ENSGAGG00000014356	-	84	35.664	ENSGAGG00000021631	ZNF652	57	35.223
ENSGAGG00000014356	-	89	61.277	ENSGAGG00000015451	-	95	57.227
ENSGAGG00000014356	-	95	61.639	ENSGAGG00000006683	-	99	71.111
ENSGAGG00000014356	-	90	50.000	ENSGAGG00000020168	-	76	50.000
ENSGAGG00000014356	-	75	63.636	ENSGAGG00000010492	-	87	63.636
ENSGAGG00000014356	-	89	64.331	ENSGAGG00000015232	-	81	64.331
ENSGAGG00000014356	-	89	68.559	ENSGAGG00000012452	-	93	68.559
ENSGAGG00000014356	-	89	51.724	ENSGAGG00000011399	-	92	51.724
ENSGAGG00000014356	-	89	88.889	ENSGAGG00000001645	-	92	65.900
ENSGAGG00000014356	-	75	55.743	ENSGAGG00000001387	-	62	56.299
ENSGAGG00000014356	-	81	56.726	ENSGAGG00000011574	-	100	56.793
ENSGAGG00000014356	-	84	45.570	ENSGAGG00000003883	ZNF236	64	45.570
ENSGAGG00000014356	-	96	56.655	ENSGAGG00000009272	-	99	58.108
ENSGAGG00000014356	-	86	65.372	ENSGAGG00000014389	-	99	68.403
ENSGAGG00000014356	-	97	66.865	ENSGAGG00000020594	-	99	67.323
ENSGAGG00000014356	-	74	52.688	ENSGAGG00000004926	-	96	52.688
ENSGAGG00000014356	-	89	38.422	ENSGAGG00000022571	ZNF319	99	38.422
ENSGAGG00000014356	-	80	57.377	ENSGAGG00000005805	-	100	57.377
ENSGAGG00000014356	-	81	34.921	ENSGAGG00000025218	ZBTB41	50	34.797
ENSGAGG00000014356	-	81	52.414	ENSGAGG00000017640	-	78	56.863
ENSGAGG00000014356	-	92	71.386	ENSGAGG00000010833	-	98	71.386
ENSGAGG00000014356	-	83	57.792	ENSGAGG00000001469	-	100	54.897
ENSGAGG00000014356	-	85	61.187	ENSGAGG00000016529	-	94	67.553
ENSGAGG00000014356	-	95	65.282	ENSGAGG00000006960	-	98	66.909
ENSGAGG00000014356	-	76	55.782	ENSGAGG00000005331	-	92	50.228
ENSGAGG00000014356	-	74	48.214	ENSGAGG00000013021	-	99	48.214
ENSGAGG00000014356	-	85	59.701	ENSGAGG00000006323	-	91	61.607
ENSGAGG00000014356	-	82	66.332	ENSGAGG00000000971	-	91	67.347
ENSGAGG00000014356	-	96	54.475	ENSGAGG00000018885	-	79	53.543
ENSGAGG00000014356	-	75	45.876	ENSGAGG00000017094	-	55	46.222
ENSGAGG00000014356	-	83	56.667	ENSGAGG00000018445	-	99	56.667
ENSGAGG00000014356	-	91	67.401	ENSGAGG00000009739	-	99	68.235
ENSGAGG00000014356	-	83	57.770	ENSGAGG00000002828	-	88	57.770
ENSGAGG00000014356	-	79	46.061	ENSGAGG00000015200	MYNN	53	46.893
ENSGAGG00000014356	-	89	68.571	ENSGAGG00000019349	-	99	71.429
ENSGAGG00000014356	-	76	72.434	ENSGAGG00000007230	-	92	72.093
ENSGAGG00000014356	-	91	70.405	ENSGAGG00000008773	-	98	67.014
ENSGAGG00000014356	-	88	84.091	ENSGAGG00000010324	-	72	84.091
ENSGAGG00000014356	-	73	35.202	ENSGAGG00000003095	ZNF865	80	38.017
ENSGAGG00000014356	-	80	69.291	ENSGAGG00000017986	-	99	68.325
ENSGAGG00000014356	-	74	46.358	ENSGAGG00000021327	GFI1B	58	46.358
ENSGAGG00000014356	-	75	72.449	ENSGAGG00000013851	-	94	69.340
ENSGAGG00000014356	-	86	69.486	ENSGAGG00000004740	-	97	69.486
ENSGAGG00000014356	-	95	58.769	ENSGAGG00000002179	-	99	60.616
ENSGAGG00000014356	-	74	54.325	ENSGAGG00000011366	-	99	54.325
ENSGAGG00000014356	-	86	90.244	ENSGAGG00000020134	-	73	90.244
ENSGAGG00000014356	-	85	55.263	ENSGAGG00000006846	-	95	51.852
ENSGAGG00000014356	-	80	55.556	ENSGAGG00000006848	-	61	53.968
ENSGAGG00000014356	-	91	58.442	ENSGAGG00000011487	-	99	57.196

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000014356	-	74	59.722	ENSAMXG00000029161	-	89	59.722	Astyanax_mexicanus
ENSGAGG00000014356	-	91	60.099	ENSCPBG00000001272	-	98	63.607	Chrysemys_picta_bellii
ENSGAGG00000014356	-	89	70.927	ENSCPBG00000021479	-	99	68.858	Chrysemys_picta_bellii
ENSGAGG00000014356	-	94	51.171	ENSCPBG00000021487	-	96	51.171	Chrysemys_picta_bellii
ENSGAGG00000014356	-	84	59.385	ENSCPBG00000001421	-	98	60.084	Chrysemys_picta_bellii
ENSGAGG00000014356	-	90	87.179	ENSCPBG00000012976	-	95	69.350	Chrysemys_picta_bellii
ENSGAGG00000014356	-	91	65.900	ENSCPBG00000016841	-	99	66.000	Chrysemys_picta_bellii
ENSGAGG00000014356	-	98	64.463	ENSCPBG00000004990	-	96	64.463	Chrysemys_picta_bellii
ENSGAGG00000014356	-	91	72.813	ENSCPBG00000004030	-	97	72.813	Chrysemys_picta_bellii
ENSGAGG00000014356	-	76	56.211	ENSPSIG00000001026	-	98	56.211	Pelodiscus_sinensis
ENSGAGG00000014356	-	96	51.373	ENSPSIG00000015465	-	99	51.373	Pelodiscus_sinensis
ENSGAGG00000014356	-	85	82.927	ENSPSIG00000012865	-	98	63.816	Pelodiscus_sinensis
ENSGAGG00000014356	-	75	58.454	ENSPSIG00000002569	-	73	59.398	Pelodiscus_sinensis
ENSGAGG00000014356	-	92	82.353	ENSPSIG00000009893	-	94	82.353	Pelodiscus_sinensis
ENSGAGG00000014356	-	80	58.824	ENSPSIG00000000522	-	100	58.824	Pelodiscus_sinensis
ENSGAGG00000014356	-	79	58.871	ENSPSIG00000015216	-	100	58.871	Pelodiscus_sinensis
ENSGAGG00000014356	-	74	57.576	ENSTGUG00000013736	-	99	58.209	Taeniopygia_guttata
ENSGAGG00000014356	-	74	67.593	ENSTGUG00000018349	-	100	67.593	Taeniopygia_guttata
ENSGAGG00000014356	-	75	57.322	ENSTGUG00000016516	-	99	57.322	Taeniopygia_guttata
ENSGAGG00000014356	-	74	57.031	ENSTGUG00000018518	-	100	57.031	Taeniopygia_guttata
ENSGAGG00000014356	-	74	57.831	ENSTGUG00000018542	-	100	57.831	Taeniopygia_guttata
ENSGAGG00000014356	-	75	54.023	ENSTGUG00000016850	-	99	55.253	Taeniopygia_guttata
ENSGAGG00000014356	-	75	55.392	ENSTGUG00000014614	-	100	56.650	Taeniopygia_guttata
ENSGAGG00000014356	-	74	57.143	ENSTGUG00000014888	-	99	57.944	Taeniopygia_guttata
ENSGAGG00000014356	-	74	57.653	ENSTGUG00000018445	-	99	57.653	Taeniopygia_guttata
ENSGAGG00000014356	-	74	59.880	ENSTGUG00000018374	-	99	59.880	Taeniopygia_guttata
ENSGAGG00000014356	-	74	55.026	ENSTGUG00000015260	-	100	55.026	Taeniopygia_guttata
ENSGAGG00000014356	-	74	55.253	ENSTGUG00000016781	-	99	56.296	Taeniopygia_guttata
ENSGAGG00000014356	-	74	61.333	ENSTGUG00000018327	-	100	61.589	Taeniopygia_guttata