EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000014558 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 2676 bases
Position: chrPPEB01003344.1:107861-110536
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000019738	RRM_5	PF13893.6	1.5e-11	1	2
ENSGAGP00000019738	RRM_5	PF13893.6	1.5e-11	2	2
ENSGAGP00000019738	RRM_1	PF00076.22	8.1e-33	1	2
ENSGAGP00000019738	RRM_1	PF00076.22	8.1e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000022488	-	483	-	ENSGAGP00000019738	160 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000014558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000014558's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000014558	-	93	48.571	ENSGAGG00000001387	-	96	40.994
ENSGAGG00000014558	-	91	41.964	ENSGAGG00000001366	-	83	41.964

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000014558	-	92	52.174	ENSAPOG00000012375	-	95	52.174	Acanthochromis_polyacanthus
ENSGAGG00000014558	-	93	51.429	ENSACIG00000016472	-	84	51.429	Amphilophus_citrinellus
ENSGAGG00000014558	-	92	52.174	ENSAOCG00000010907	-	95	52.174	Amphiprion_ocellaris
ENSGAGG00000014558	-	92	52.174	ENSAPEG00000009476	-	96	52.174	Amphiprion_percula
ENSGAGG00000014558	-	92	52.174	ENSATEG00000001912	-	89	52.174	Anabas_testudineus
ENSGAGG00000014558	-	92	46.617	ENSAMXG00000032121	rbm4.2	84	46.617	Astyanax_mexicanus
ENSGAGG00000014558	-	100	98.125	ENSCPBG00000023666	-	100	98.125	Chrysemys_picta_bellii
ENSGAGG00000014558	-	92	47.541	ENSCSEG00000007739	-	99	47.541	Cynoglossus_semilaevis
ENSGAGG00000014558	-	93	47.945	ENSDARG00000036386	rbm4.1	81	48.905	Danio_rerio
ENSGAGG00000014558	-	92	47.682	ENSEBUG00000007174	-	88	47.682	Eptatretus_burgeri
ENSGAGG00000014558	-	92	52.174	ENSFHEG00000003483	-	91	52.174	Fundulus_heteroclitus
ENSGAGG00000014558	-	92	49.275	ENSGAFG00000019301	-	91	49.275	Gambusia_affinis
ENSGAGG00000014558	-	92	50.725	ENSHBUG00000011624	-	91	50.725	Haplochromis_burtoni
ENSGAGG00000014558	-	92	49.275	ENSHCOG00000011413	-	81	49.275	Hippocampus_comes
ENSGAGG00000014558	-	93	51.429	ENSLBEG00000019756	-	83	52.174	Labrus_bergylta
ENSGAGG00000014558	-	93	75.000	ENSLACG00000006343	zgc:77262	55	72.152	Latimeria_chalumnae
ENSGAGG00000014558	-	93	45.833	ENSLOCG00000002772	rbm4.1	97	45.833	Lepisosteus_oculatus
ENSGAGG00000014558	-	88	42.143	ENSMZEG00005009210	-	78	42.143	Maylandia_zebra
ENSGAGG00000014558	-	92	44.037	ENSMZEG00005028161	-	65	44.037	Maylandia_zebra
ENSGAGG00000014558	-	92	50.725	ENSMZEG00005028160	-	90	50.725	Maylandia_zebra
ENSGAGG00000014558	-	92	55.072	ENSMMOG00000020484	-	85	55.072	Mola_mola
ENSGAGG00000014558	-	92	50.725	ENSNBRG00000017763	-	90	50.725	Neolamprologus_brichardi
ENSGAGG00000014558	-	99	45.570	ENSPKIG00000020805	rbm4.1	96	45.570	Paramormyrops_kingsleyae
ENSGAGG00000014558	-	92	50.376	ENSPMGG00000004331	rbm4.1	92	50.376	Periophthalmus_magnuspinnatus
ENSGAGG00000014558	-	93	48.649	ENSPMAG00000003433	rbm4.2	71	48.649	Petromyzon_marinus
ENSGAGG00000014558	-	92	50.725	ENSPFOG00000012685	-	59	50.725	Poecilia_formosa
ENSGAGG00000014558	-	92	50.725	ENSPLAG00000018569	-	96	50.725	Poecilia_latipinna
ENSGAGG00000014558	-	92	50.725	ENSPMEG00000006278	-	96	50.725	Poecilia_mexicana
ENSGAGG00000014558	-	92	49.275	ENSPREG00000003764	-	59	48.571	Poecilia_reticulata
ENSGAGG00000014558	-	92	50.725	ENSPNYG00000004649	-	90	50.725	Pundamilia_nyererei
ENSGAGG00000014558	-	89	65.152	ENSSFOG00015018567	zgc:77262	91	65.152	Scleropages_formosus
ENSGAGG00000014558	-	92	50.725	ENSSMAG00000007575	-	88	50.725	Scophthalmus_maximus
ENSGAGG00000014558	-	92	49.275	ENSXCOG00000003730	-	86	49.275	Xiphophorus_couchianus