EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000014999 (Gene tree)
Gene ID: -
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 4094 bases
Position: chrPPEB01009355.1:35393-39486
Accession: 587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000020347	Exo_endo_phos	PF03372.23	3.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000023183	APEX1-201	1182	-	ENSGAGP00000020347	318 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000014999's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000014999's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000014999	APEX1	100	71.787	ENSG00000100823	APEX1	100	71.787	Homo_sapiens
ENSGAGG00000014999	APEX1	87	72.302	ENSAPOG00000017002	apex1	99	66.456	Acanthochromis_polyacanthus
ENSGAGG00000014999	APEX1	100	70.219	ENSAMEG00000005418	APEX1	100	70.219	Ailuropoda_melanoleuca
ENSGAGG00000014999	APEX1	87	75.725	ENSACIG00000010653	apex1	96	74.912	Amphilophus_citrinellus
ENSGAGG00000014999	APEX1	87	73.022	ENSAOCG00000009649	apex1	99	67.722	Amphiprion_ocellaris
ENSGAGG00000014999	APEX1	87	73.022	ENSAPEG00000021453	apex1	99	67.722	Amphiprion_percula
ENSGAGG00000014999	APEX1	99	70.159	ENSATEG00000002883	apex1	97	70.159	Anabas_testudineus
ENSGAGG00000014999	APEX1	100	76.176	ENSACAG00000008099	APEX1	100	76.176	Anolis_carolinensis
ENSGAGG00000014999	APEX1	80	31.699	ENSACAG00000011201	APEX2	59	31.699	Anolis_carolinensis
ENSGAGG00000014999	APEX1	100	71.160	ENSANAG00000030117	APEX1	100	71.160	Aotus_nancymaae
ENSGAGG00000014999	APEX1	86	76.727	ENSACLG00000018441	apex1	99	71.203	Astatotilapia_calliptera
ENSGAGG00000014999	APEX1	100	71.875	ENSAMXG00000034699	apex1	100	70.938	Astyanax_mexicanus
ENSGAGG00000014999	APEX1	100	71.473	ENSBTAG00000002745	APEX1	100	71.473	Bos_taurus
ENSGAGG00000014999	APEX1	91	44.521	WBGene00001372	exo-3	88	47.843	Caenorhabditis_elegans
ENSGAGG00000014999	APEX1	100	71.787	ENSCJAG00000009726	APEX1	100	71.787	Callithrix_jacchus
ENSGAGG00000014999	APEX1	100	70.533	ENSCAFG00000032033	APEX1	100	70.533	Canis_familiaris
ENSGAGG00000014999	APEX1	54	61.272	ENSCAFG00020023002	-	96	61.272	Canis_lupus_dingo
ENSGAGG00000014999	APEX1	100	70.533	ENSCAFG00020014377	-	100	70.533	Canis_lupus_dingo
ENSGAGG00000014999	APEX1	85	59.410	ENSCHIG00000014537	-	86	59.410	Capra_hircus
ENSGAGG00000014999	APEX1	100	71.473	ENSCHIG00000007298	-	100	71.473	Capra_hircus
ENSGAGG00000014999	APEX1	100	70.533	ENSTSYG00000034813	APEX1	100	70.533	Carlito_syrichta
ENSGAGG00000014999	APEX1	81	69.349	ENSCAPG00000016235	APEX1	91	74.153	Cavia_aperea
ENSGAGG00000014999	APEX1	100	70.533	ENSCPOG00000030909	APEX1	100	70.533	Cavia_porcellus
ENSGAGG00000014999	APEX1	100	71.787	ENSCCAG00000033056	-	100	71.787	Cebus_capucinus
ENSGAGG00000014999	APEX1	100	61.442	ENSCCAG00000031931	-	100	61.442	Cebus_capucinus
ENSGAGG00000014999	APEX1	100	71.473	ENSCATG00000015580	APEX1	100	71.473	Cercocebus_atys
ENSGAGG00000014999	APEX1	100	70.533	ENSCLAG00000001002	APEX1	100	70.533	Chinchilla_lanigera
ENSGAGG00000014999	APEX1	100	71.787	ENSCSAG00000016670	-	100	71.787	Chlorocebus_sabaeus
ENSGAGG00000014999	APEX1	100	71.787	ENSCSAG00000016685	-	100	71.787	Chlorocebus_sabaeus
ENSGAGG00000014999	APEX1	80	30.897	ENSCPBG00000016631	APEX2	62	30.897	Chrysemys_picta_bellii
ENSGAGG00000014999	APEX1	100	96.855	ENSCPBG00000009567	APEX1	100	96.855	Chrysemys_picta_bellii
ENSGAGG00000014999	APEX1	93	55.184	ENSCING00000008137	-	85	58.801	Ciona_intestinalis
ENSGAGG00000014999	APEX1	90	49.169	ENSCSAVG00000007144	-	100	55.426	Ciona_savignyi
ENSGAGG00000014999	APEX1	100	71.787	ENSCANG00000030726	APEX1	100	71.787	Colobus_angolensis_palliatus
ENSGAGG00000014999	APEX1	100	70.219	ENSCGRG00001017046	Apex1	100	70.219	Cricetulus_griseus_chok1gshd
ENSGAGG00000014999	APEX1	100	70.219	ENSCGRG00000008984	Apex1	100	70.219	Cricetulus_griseus_crigri
ENSGAGG00000014999	APEX1	99	68.671	ENSCSEG00000017499	apex1	99	67.722	Cynoglossus_semilaevis
ENSGAGG00000014999	APEX1	99	69.620	ENSCVAG00000022075	apex1	99	69.620	Cyprinodon_variegatus
ENSGAGG00000014999	APEX1	100	71.384	ENSDARG00000045843	apex1	100	71.384	Danio_rerio
ENSGAGG00000014999	APEX1	100	66.144	ENSDNOG00000042234	APEX1	95	66.144	Dasypus_novemcinctus
ENSGAGG00000014999	APEX1	100	70.219	ENSDORG00000001616	Apex1	100	70.219	Dipodomys_ordii
ENSGAGG00000014999	APEX1	100	71.160	ENSETEG00000004855	-	100	71.160	Echinops_telfairi
ENSGAGG00000014999	APEX1	75	60.924	ENSEBUG00000000622	-	92	60.924	Eptatretus_burgeri
ENSGAGG00000014999	APEX1	100	71.160	ENSEASG00005017489	APEX1	74	71.160	Equus_asinus_asinus
ENSGAGG00000014999	APEX1	100	71.160	ENSECAG00000022325	APEX1	82	71.160	Equus_caballus
ENSGAGG00000014999	APEX1	90	69.792	ENSEEUG00000012569	APEX1	100	69.792	Erinaceus_europaeus
ENSGAGG00000014999	APEX1	87	76.087	ENSELUG00000021706	apex1	100	70.846	Esox_lucius
ENSGAGG00000014999	APEX1	100	71.160	ENSFCAG00000030869	APEX1	100	71.160	Felis_catus
ENSGAGG00000014999	APEX1	100	71.160	ENSFDAG00000006120	APEX1	100	71.160	Fukomys_damarensis
ENSGAGG00000014999	APEX1	99	70.886	ENSFHEG00000009031	apex1	83	70.886	Fundulus_heteroclitus
ENSGAGG00000014999	APEX1	99	68.038	ENSGMOG00000007943	apex1	99	67.296	Gadus_morhua
ENSGAGG00000014999	APEX1	99	69.620	ENSGAFG00000005311	apex1	99	69.620	Gambusia_affinis
ENSGAGG00000014999	APEX1	99	70.253	ENSGACG00000019497	apex1	99	74.812	Gasterosteus_aculeatus
ENSGAGG00000014999	APEX1	100	71.787	ENSGGOG00000002128	APEX1	100	71.787	Gorilla_gorilla
ENSGAGG00000014999	APEX1	99	70.886	ENSHBUG00000005894	apex1	99	70.570	Haplochromis_burtoni
ENSGAGG00000014999	APEX1	100	71.160	ENSHGLG00000002848	APEX1	100	71.160	Heterocephalus_glaber_female
ENSGAGG00000014999	APEX1	100	71.160	ENSHGLG00100017878	APEX1	100	71.160	Heterocephalus_glaber_male
ENSGAGG00000014999	APEX1	99	70.253	ENSHCOG00000009961	apex1	99	69.937	Hippocampus_comes
ENSGAGG00000014999	APEX1	100	72.642	ENSIPUG00000005799	apex1	100	72.013	Ictalurus_punctatus
ENSGAGG00000014999	APEX1	100	71.473	ENSSTOG00000010096	APEX1	100	71.473	Ictidomys_tridecemlineatus
ENSGAGG00000014999	APEX1	93	64.765	ENSJJAG00000020465	-	96	64.765	Jaculus_jaculus
ENSGAGG00000014999	APEX1	100	69.279	ENSJJAG00000012067	-	100	69.279	Jaculus_jaculus
ENSGAGG00000014999	APEX1	100	62.382	ENSJJAG00000003660	-	100	62.382	Jaculus_jaculus
ENSGAGG00000014999	APEX1	87	76.619	ENSKMAG00000021171	apex1	99	70.570	Kryptolebias_marmoratus
ENSGAGG00000014999	APEX1	99	69.937	ENSLBEG00000010248	apex1	99	69.937	Labrus_bergylta
ENSGAGG00000014999	APEX1	100	71.875	ENSLACG00000008617	APEX1	100	71.384	Latimeria_chalumnae
ENSGAGG00000014999	APEX1	100	70.279	ENSLOCG00000015516	apex1	89	75.445	Lepisosteus_oculatus
ENSGAGG00000014999	APEX1	100	69.592	ENSLAFG00000021872	APEX1	100	69.592	Loxodonta_africana
ENSGAGG00000014999	APEX1	100	71.160	ENSMFAG00000002565	APEX1	100	71.160	Macaca_fascicularis
ENSGAGG00000014999	APEX1	100	71.473	ENSMMUG00000048039	APEX1	100	71.473	Macaca_mulatta
ENSGAGG00000014999	APEX1	100	71.473	ENSMNEG00000036944	APEX1	100	71.473	Macaca_nemestrina
ENSGAGG00000014999	APEX1	100	71.473	ENSMLEG00000042125	APEX1	100	71.473	Mandrillus_leucophaeus
ENSGAGG00000014999	APEX1	99	69.937	ENSMAMG00000023526	apex1	99	69.937	Mastacembelus_armatus
ENSGAGG00000014999	APEX1	86	76.727	ENSMZEG00005014187	apex1	99	71.203	Maylandia_zebra
ENSGAGG00000014999	APEX1	100	69.906	ENSMAUG00000013994	Apex1	100	69.279	Mesocricetus_auratus
ENSGAGG00000014999	APEX1	100	69.906	ENSMICG00000043554	APEX1	100	69.906	Microcebus_murinus
ENSGAGG00000014999	APEX1	100	69.279	ENSMOCG00000013721	Apex1	100	69.279	Microtus_ochrogaster
ENSGAGG00000014999	APEX1	96	67.823	ENSMMOG00000010031	apex1	97	69.085	Mola_mola
ENSGAGG00000014999	APEX1	100	68.438	ENSMODG00000007125	APEX1	100	68.438	Monodelphis_domestica
ENSGAGG00000014999	APEX1	87	69.424	ENSMALG00000011699	apex1	76	68.905	Monopterus_albus
ENSGAGG00000014999	APEX1	99	71.069	MGP_CAROLIEiJ_G0019209	Apex1	99	71.069	Mus_caroli
ENSGAGG00000014999	APEX1	100	70.846	ENSMUSG00000035960	Apex1	100	70.846	Mus_musculus
ENSGAGG00000014999	APEX1	100	70.846	MGP_PahariEiJ_G0030232	Apex1	100	70.846	Mus_pahari
ENSGAGG00000014999	APEX1	100	70.846	MGP_SPRETEiJ_G0020101	Apex1	100	70.846	Mus_spretus
ENSGAGG00000014999	APEX1	100	69.470	ENSMLUG00000028957	APEX1	100	69.470	Myotis_lucifugus
ENSGAGG00000014999	APEX1	88	56.429	ENSNGAG00000021748	-	86	56.429	Nannospalax_galili
ENSGAGG00000014999	APEX1	100	69.279	ENSNGAG00000002725	-	100	69.279	Nannospalax_galili
ENSGAGG00000014999	APEX1	86	76.364	ENSNBRG00000005334	apex1	91	70.886	Neolamprologus_brichardi
ENSGAGG00000014999	APEX1	100	71.473	ENSNLEG00000010839	APEX1	100	71.473	Nomascus_leucogenys
ENSGAGG00000014999	APEX1	100	68.339	ENSMEUG00000014519	APEX1	100	68.339	Notamacropus_eugenii
ENSGAGG00000014999	APEX1	100	71.160	ENSOPRG00000014029	APEX1	100	70.533	Ochotona_princeps
ENSGAGG00000014999	APEX1	100	70.219	ENSODEG00000001703	-	100	70.219	Octodon_degus
ENSGAGG00000014999	APEX1	97	56.311	ENSODEG00000004777	-	99	56.311	Octodon_degus
ENSGAGG00000014999	APEX1	100	55.077	ENSODEG00000006583	-	100	55.077	Octodon_degus
ENSGAGG00000014999	APEX1	87	76.812	ENSONIG00000012089	apex1	99	71.203	Oreochromis_niloticus
ENSGAGG00000014999	APEX1	89	71.127	ENSOANG00000008836	APEX1	80	69.231	Ornithorhynchus_anatinus
ENSGAGG00000014999	APEX1	100	70.846	ENSOCUG00000005022	APEX1	100	70.846	Oryctolagus_cuniculus
ENSGAGG00000014999	APEX1	99	70.570	ENSORLG00000012378	apex1	99	70.570	Oryzias_latipes
ENSGAGG00000014999	APEX1	99	70.570	ENSORLG00020021371	apex1	99	70.570	Oryzias_latipes_hni
ENSGAGG00000014999	APEX1	99	70.570	ENSORLG00015020089	apex1	99	70.570	Oryzias_latipes_hsok
ENSGAGG00000014999	APEX1	99	70.570	ENSOMEG00000018876	apex1	99	70.570	Oryzias_melastigma
ENSGAGG00000014999	APEX1	100	70.533	ENSOGAG00000013335	-	100	70.533	Otolemur_garnettii
ENSGAGG00000014999	APEX1	99	63.608	ENSOGAG00000029355	-	100	63.608	Otolemur_garnettii
ENSGAGG00000014999	APEX1	97	67.638	ENSOARG00000001876	-	100	67.638	Ovis_aries
ENSGAGG00000014999	APEX1	94	60.000	ENSOARG00000014424	-	97	57.947	Ovis_aries
ENSGAGG00000014999	APEX1	100	71.160	ENSOARG00000019740	-	100	71.160	Ovis_aries
ENSGAGG00000014999	APEX1	100	72.100	ENSPPAG00000038760	APEX1	100	72.100	Pan_paniscus
ENSGAGG00000014999	APEX1	100	70.846	ENSPPRG00000011794	APEX1	100	70.846	Panthera_pardus
ENSGAGG00000014999	APEX1	100	71.160	ENSPTIG00000014829	APEX1	100	71.160	Panthera_tigris_altaica
ENSGAGG00000014999	APEX1	100	72.100	ENSPTRG00000006093	APEX1	100	72.100	Pan_troglodytes
ENSGAGG00000014999	APEX1	100	71.473	ENSPANG00000022757	APEX1	100	71.473	Papio_anubis
ENSGAGG00000014999	APEX1	87	73.913	ENSPKIG00000003504	apex1	100	69.182	Paramormyrops_kingsleyae
ENSGAGG00000014999	APEX1	85	66.912	ENSPMGG00000016596	apex1	80	66.912	Periophthalmus_magnuspinnatus
ENSGAGG00000014999	APEX1	100	70.533	ENSPEMG00000019097	Apex1	100	70.533	Peromyscus_maniculatus_bairdii
ENSGAGG00000014999	APEX1	94	69.900	ENSPMAG00000007275	-	96	71.277	Petromyzon_marinus
ENSGAGG00000014999	APEX1	100	66.771	ENSPCIG00000023274	APEX1	100	68.536	Phascolarctos_cinereus
ENSGAGG00000014999	APEX1	99	69.937	ENSPFOG00000004178	apex1	99	70.570	Poecilia_formosa
ENSGAGG00000014999	APEX1	99	69.937	ENSPLAG00000012779	apex1	99	70.570	Poecilia_latipinna
ENSGAGG00000014999	APEX1	99	69.937	ENSPMEG00000019623	apex1	99	70.570	Poecilia_mexicana
ENSGAGG00000014999	APEX1	99	70.253	ENSPREG00000014298	apex1	99	70.570	Poecilia_reticulata
ENSGAGG00000014999	APEX1	100	72.100	ENSPPYG00000005565	APEX1	100	72.100	Pongo_abelii
ENSGAGG00000014999	APEX1	100	68.339	ENSPCAG00000010376	APEX1	100	68.339	Procavia_capensis
ENSGAGG00000014999	APEX1	100	70.219	ENSPCOG00000021564	APEX1	100	70.219	Propithecus_coquereli
ENSGAGG00000014999	APEX1	100	70.717	ENSPVAG00000010736	APEX1	100	70.405	Pteropus_vampyrus
ENSGAGG00000014999	APEX1	86	76.727	ENSPNYG00000023940	apex1	99	71.203	Pundamilia_nyererei
ENSGAGG00000014999	APEX1	96	68.627	ENSPNAG00000020897	apex1	96	70.548	Pygocentrus_nattereri
ENSGAGG00000014999	APEX1	100	69.906	ENSRNOG00000009663	Apex1	100	69.906	Rattus_norvegicus
ENSGAGG00000014999	APEX1	100	71.787	ENSRBIG00000038325	APEX1	99	71.787	Rhinopithecus_bieti
ENSGAGG00000014999	APEX1	100	71.787	ENSSBOG00000018921	-	100	71.787	Saimiri_boliviensis_boliviensis
ENSGAGG00000014999	APEX1	100	59.875	ENSSBOG00000031372	-	100	58.934	Saimiri_boliviensis_boliviensis
ENSGAGG00000014999	APEX1	100	66.358	ENSSHAG00000013524	APEX1	100	66.358	Sarcophilus_harrisii
ENSGAGG00000014999	APEX1	100	69.182	ENSSFOG00015001948	apex1	100	69.497	Scleropages_formosus
ENSGAGG00000014999	APEX1	87	74.275	ENSSMAG00000013348	apex1	99	69.937	Scophthalmus_maximus
ENSGAGG00000014999	APEX1	99	70.253	ENSSDUG00000016377	apex1	99	70.570	Seriola_dumerili
ENSGAGG00000014999	APEX1	99	69.937	ENSSLDG00000023005	apex1	99	70.253	Seriola_lalandi_dorsalis
ENSGAGG00000014999	APEX1	92	78.767	ENSSPUG00000000531	APEX1	99	74.132	Sphenodon_punctatus
ENSGAGG00000014999	APEX1	99	67.405	ENSSPAG00000000458	apex1	99	67.405	Stegastes_partitus
ENSGAGG00000014999	APEX1	84	43.590	ENSSSCG00000039705	-	90	43.590	Sus_scrofa
ENSGAGG00000014999	APEX1	100	70.533	ENSSSCG00000040060	-	100	70.533	Sus_scrofa
ENSGAGG00000014999	APEX1	74	63.830	ENSTGUG00000014378	APEX1	100	63.830	Taeniopygia_guttata
ENSGAGG00000014999	APEX1	87	73.188	ENSTRUG00000004268	apex1	95	68.354	Takifugu_rubripes
ENSGAGG00000014999	APEX1	99	69.304	ENSTNIG00000005778	apex1	99	69.304	Tetraodon_nigroviridis
ENSGAGG00000014999	APEX1	100	68.966	ENSTBEG00000006405	APEX1	100	68.966	Tupaia_belangeri
ENSGAGG00000014999	APEX1	74	72.766	ENSTTRG00000007860	APEX1	100	72.766	Tursiops_truncatus
ENSGAGG00000014999	APEX1	100	69.906	ENSUAMG00000010457	APEX1	100	69.906	Ursus_americanus
ENSGAGG00000014999	APEX1	100	69.906	ENSUMAG00000009178	APEX1	100	69.906	Ursus_maritimus
ENSGAGG00000014999	APEX1	74	69.787	ENSVPAG00000005083	APEX1	100	69.787	Vicugna_pacos
ENSGAGG00000014999	APEX1	100	70.219	ENSVVUG00000009010	APEX1	100	70.219	Vulpes_vulpes
ENSGAGG00000014999	APEX1	100	71.384	ENSXETG00000024773	apex1	100	71.384	Xenopus_tropicalis
ENSGAGG00000014999	APEX1	99	70.570	ENSXCOG00000015233	apex1	99	70.253	Xiphophorus_couchianus
ENSGAGG00000014999	APEX1	99	70.570	ENSXMAG00000006195	apex1	99	70.253	Xiphophorus_maculatus