EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000015232 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 4586 bases
Position: chrPPEB01004278.1:73202-77787
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000020677	zf-C2H2	PF00096.26	1.8e-31	1	5
ENSGAGP00000020677	zf-C2H2	PF00096.26	1.8e-31	2	5
ENSGAGP00000020677	zf-C2H2	PF00096.26	1.8e-31	3	5
ENSGAGP00000020677	zf-C2H2	PF00096.26	1.8e-31	4	5
ENSGAGP00000020677	zf-C2H2	PF00096.26	1.8e-31	5	5
ENSGAGP00000020677	zf-met	PF12874.7	6.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000023553	-	858	-	ENSGAGP00000020677	285 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000015232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000015232's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000015232	-	68	51.592	ENSGAGG00000017094	-	51	51.592
ENSGAGG00000015232	-	92	65.269	ENSGAGG00000010833	-	91	64.634
ENSGAGG00000015232	-	70	62.651	ENSGAGG00000013851	-	82	62.651
ENSGAGG00000015232	-	80	68.056	ENSGAGG00000006960	-	86	68.056
ENSGAGG00000015232	-	68	60.479	ENSGAGG00000009739	-	99	60.479
ENSGAGG00000015232	-	99	47.857	ENSGAGG00000009272	-	97	54.872
ENSGAGG00000015232	-	85	52.821	ENSGAGG00000001469	-	91	52.821
ENSGAGG00000015232	-	67	42.515	ENSGAGG00000022571	ZNF319	88	42.515
ENSGAGG00000015232	-	81	70.253	ENSGAGG00000020594	-	96	70.253
ENSGAGG00000015232	-	81	64.331	ENSGAGG00000014356	-	89	64.331
ENSGAGG00000015232	-	69	61.585	ENSGAGG00000001645	-	63	61.585
ENSGAGG00000015232	-	68	71.613	ENSGAGG00000015451	-	84	71.613
ENSGAGG00000015232	-	78	51.282	ENSGAGG00000001387	-	59	51.282
ENSGAGG00000015232	-	93	53.333	ENSGAGG00000002179	-	98	62.411
ENSGAGG00000015232	-	91	51.825	ENSGAGG00000011399	-	92	48.718
ENSGAGG00000015232	-	70	62.037	ENSGAGG00000016529	-	91	62.037
ENSGAGG00000015232	-	70	64.242	ENSGAGG00000011574	-	78	64.242
ENSGAGG00000015232	-	68	51.250	ENSGAGG00000004926	-	96	51.250
ENSGAGG00000015232	-	89	56.287	ENSGAGG00000006323	-	94	57.485
ENSGAGG00000015232	-	70	61.078	ENSGAGG00000000971	-	91	61.078
ENSGAGG00000015232	-	70	58.683	ENSGAGG00000011487	-	79	58.683
ENSGAGG00000015232	-	72	51.220	ENSGAGG00000010492	-	90	51.220
ENSGAGG00000015232	-	68	65.248	ENSGAGG00000004740	-	86	69.828
ENSGAGG00000015232	-	78	58.974	ENSGAGG00000014389	-	93	63.415
ENSGAGG00000015232	-	55	50.000	ENSGAGG00000015899	GFI1	98	50.000
ENSGAGG00000015232	-	68	48.503	ENSGAGG00000013021	-	86	48.503
ENSGAGG00000015232	-	71	62.987	ENSGAGG00000019349	-	79	62.987
ENSGAGG00000015232	-	70	53.503	ENSGAGG00000018445	-	78	53.503
ENSGAGG00000015232	-	70	54.762	ENSGAGG00000011366	-	95	54.762
ENSGAGG00000015232	-	81	60.563	ENSGAGG00000008773	-	87	60.563
ENSGAGG00000015232	-	68	63.694	ENSGAGG00000020134	-	66	63.694
ENSGAGG00000015232	-	97	47.692	ENSGAGG00000018885	-	81	47.692
ENSGAGG00000015232	-	71	55.488	ENSGAGG00000006846	-	92	55.488
ENSGAGG00000015232	-	75	50.270	ENSGAGG00000006848	-	59	50.270
ENSGAGG00000015232	-	68	61.538	ENSGAGG00000002828	-	67	61.538
ENSGAGG00000015232	-	86	57.317	ENSGAGG00000020168	-	71	57.317
ENSGAGG00000015232	-	87	58.333	ENSGAGG00000006683	-	99	63.006
ENSGAGG00000015232	-	84	60.510	ENSGAGG00000010324	-	81	57.143
ENSGAGG00000015232	-	68	42.675	ENSGAGG00000003095	ZNF865	84	42.675
ENSGAGG00000015232	-	93	56.923	ENSGAGG00000002214	-	87	57.297
ENSGAGG00000015232	-	60	58.163	ENSGAGG00000017640	-	59	53.097
ENSGAGG00000015232	-	70	52.000	ENSGAGG00000005331	-	80	52.000
ENSGAGG00000015232	-	68	58.960	ENSGAGG00000012452	-	67	58.960
ENSGAGG00000015232	-	70	55.844	ENSGAGG00000005805	-	83	55.844
ENSGAGG00000015232	-	87	58.333	ENSGAGG00000017986	-	90	70.213
ENSGAGG00000015232	-	68	65.868	ENSGAGG00000007230	-	77	65.868

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000015232	-	59	48.454	ENSAPOG00000009709	-	53	49.091	Acanthochromis_polyacanthus
ENSGAGG00000015232	-	70	45.122	ENSAPOG00000021966	-	50	45.122	Acanthochromis_polyacanthus
ENSGAGG00000015232	-	69	51.316	ENSAPOG00000004997	-	82	51.316	Acanthochromis_polyacanthus
ENSGAGG00000015232	-	70	48.889	ENSAPOG00000023008	-	60	48.889	Acanthochromis_polyacanthus
ENSGAGG00000015232	-	76	44.928	ENSACIG00000007096	-	73	44.928	Amphilophus_citrinellus
ENSGAGG00000015232	-	70	47.826	ENSACIG00000022738	-	91	47.973	Amphilophus_citrinellus
ENSGAGG00000015232	-	60	45.133	ENSACIG00000006228	-	56	45.133	Amphilophus_citrinellus
ENSGAGG00000015232	-	70	46.707	ENSAOCG00000016409	-	54	46.707	Amphiprion_ocellaris
ENSGAGG00000015232	-	69	38.095	ENSAPEG00000009553	-	55	40.719	Amphiprion_percula
ENSGAGG00000015232	-	70	46.108	ENSAPEG00000008746	-	54	46.108	Amphiprion_percula
ENSGAGG00000015232	-	70	49.032	ENSATEG00000015238	-	58	49.032	Anabas_testudineus
ENSGAGG00000015232	-	85	44.578	ENSATEG00000022064	-	92	45.783	Anabas_testudineus
ENSGAGG00000015232	-	68	42.073	ENSATEG00000021602	-	65	42.073	Anabas_testudineus
ENSGAGG00000015232	-	79	44.311	ENSATEG00000014684	-	93	44.311	Anabas_testudineus
ENSGAGG00000015232	-	68	44.118	ENSACLG00000022482	-	81	44.118	Astatotilapia_calliptera
ENSGAGG00000015232	-	88	44.286	ENSACLG00000008374	-	56	44.286	Astatotilapia_calliptera
ENSGAGG00000015232	-	59	38.686	ENSACLG00000013531	-	91	38.686	Astatotilapia_calliptera
ENSGAGG00000015232	-	59	44.000	ENSACLG00000018716	-	85	44.000	Astatotilapia_calliptera
ENSGAGG00000015232	-	68	47.101	ENSACLG00000005795	-	64	47.101	Astatotilapia_calliptera
ENSGAGG00000015232	-	68	47.500	ENSACLG00000001368	-	88	47.500	Astatotilapia_calliptera
ENSGAGG00000015232	-	58	41.958	ENSACLG00000019482	-	74	41.958	Astatotilapia_calliptera
ENSGAGG00000015232	-	68	45.223	ENSACLG00000019349	-	69	45.223	Astatotilapia_calliptera
ENSGAGG00000015232	-	59	43.713	ENSACLG00000011239	-	69	43.713	Astatotilapia_calliptera
ENSGAGG00000015232	-	68	47.143	ENSACLG00000006718	-	52	47.143	Astatotilapia_calliptera
ENSGAGG00000015232	-	68	47.143	ENSACLG00000020333	-	52	47.143	Astatotilapia_calliptera
ENSGAGG00000015232	-	59	43.949	ENSACLG00000014365	-	90	43.949	Astatotilapia_calliptera
ENSGAGG00000015232	-	74	44.586	ENSACLG00000015462	-	65	44.586	Astatotilapia_calliptera
ENSGAGG00000015232	-	68	46.795	ENSAMXG00000007973	-	89	44.286	Astyanax_mexicanus
ENSGAGG00000015232	-	70	44.138	ENSAMXG00000034934	-	75	44.138	Astyanax_mexicanus
ENSGAGG00000015232	-	65	42.754	ENSCSEG00000019848	-	59	41.622	Cynoglossus_semilaevis
ENSGAGG00000015232	-	55	42.000	ENSCSEG00000019599	-	61	42.000	Cynoglossus_semilaevis
ENSGAGG00000015232	-	59	37.195	ENSCVAG00000020968	-	58	37.195	Cyprinodon_variegatus
ENSGAGG00000015232	-	68	47.305	ENSCVAG00000019097	-	56	47.305	Cyprinodon_variegatus
ENSGAGG00000015232	-	66	43.158	ENSCVAG00000021152	-	63	43.158	Cyprinodon_variegatus
ENSGAGG00000015232	-	68	47.143	ENSELUG00000004677	-	67	48.408	Esox_lucius
ENSGAGG00000015232	-	59	48.872	ENSFHEG00000003460	-	63	48.872	Fundulus_heteroclitus
ENSGAGG00000015232	-	59	44.361	ENSFHEG00000004548	-	53	44.361	Fundulus_heteroclitus
ENSGAGG00000015232	-	68	52.229	ENSGMOG00000009187	ZNF626	74	52.229	Gadus_morhua
ENSGAGG00000015232	-	59	60.606	ENSGMOG00000017518	-	63	60.606	Gadus_morhua
ENSGAGG00000015232	-	84	44.516	ENSGAFG00000001481	-	79	46.497	Gambusia_affinis
ENSGAGG00000015232	-	59	41.732	ENSGAFG00000007532	-	74	41.732	Gambusia_affinis
ENSGAGG00000015232	-	55	43.165	ENSHBUG00000020544	-	84	43.165	Haplochromis_burtoni
ENSGAGG00000015232	-	88	44.286	ENSHBUG00000017924	-	56	44.286	Haplochromis_burtoni
ENSGAGG00000015232	-	59	44.586	ENSHBUG00000020527	-	84	44.586	Haplochromis_burtoni
ENSGAGG00000015232	-	68	45.860	ENSHBUG00000009274	-	83	45.860	Haplochromis_burtoni
ENSGAGG00000015232	-	68	46.341	ENSHBUG00000011944	-	64	39.320	Haplochromis_burtoni
ENSGAGG00000015232	-	68	44.444	ENSHBUG00000017251	-	98	44.444	Haplochromis_burtoni
ENSGAGG00000015232	-	74	44.586	ENSHBUG00000019377	-	65	44.586	Haplochromis_burtoni
ENSGAGG00000015232	-	68	46.377	ENSHBUG00000013065	-	58	46.377	Haplochromis_burtoni
ENSGAGG00000015232	-	70	43.713	ENSIPUG00000022266	ZNF135	60	43.713	Ictalurus_punctatus
ENSGAGG00000015232	-	70	47.134	ENSKMAG00000000802	-	90	47.134	Kryptolebias_marmoratus
ENSGAGG00000015232	-	68	47.742	ENSKMAG00000015304	-	59	47.742	Kryptolebias_marmoratus
ENSGAGG00000015232	-	59	43.000	ENSLBEG00000008909	-	77	43.000	Labrus_bergylta
ENSGAGG00000015232	-	59	44.186	ENSLBEG00000026457	-	97	44.186	Labrus_bergylta
ENSGAGG00000015232	-	70	43.056	ENSLBEG00000008850	-	69	43.056	Labrus_bergylta
ENSGAGG00000015232	-	84	42.614	ENSLOCG00000017422	-	75	42.614	Lepisosteus_oculatus
ENSGAGG00000015232	-	70	49.677	ENSMAMG00000010902	-	58	49.677	Mastacembelus_armatus
ENSGAGG00000015232	-	73	39.744	ENSMAMG00000002083	-	99	39.744	Mastacembelus_armatus
ENSGAGG00000015232	-	59	50.980	ENSMAMG00000015434	-	68	50.980	Mastacembelus_armatus
ENSGAGG00000015232	-	74	44.586	ENSMZEG00005018502	-	65	44.586	Maylandia_zebra
ENSGAGG00000015232	-	68	49.180	ENSMZEG00005020568	-	79	49.180	Maylandia_zebra
ENSGAGG00000015232	-	68	48.485	ENSMZEG00005025125	-	94	48.485	Maylandia_zebra
ENSGAGG00000015232	-	68	45.270	ENSMZEG00005025725	-	91	45.270	Maylandia_zebra
ENSGAGG00000015232	-	68	41.667	ENSMZEG00005027551	-	91	43.421	Maylandia_zebra
ENSGAGG00000015232	-	68	46.341	ENSMZEG00005025965	-	53	46.341	Maylandia_zebra
ENSGAGG00000015232	-	88	44.286	ENSMZEG00005011431	-	89	45.614	Maylandia_zebra
ENSGAGG00000015232	-	68	47.101	ENSMZEG00005011812	-	58	47.101	Maylandia_zebra
ENSGAGG00000015232	-	55	39.080	ENSMZEG00005025006	-	88	39.080	Maylandia_zebra
ENSGAGG00000015232	-	64	44.615	ENSMZEG00005012676	-	88	44.615	Maylandia_zebra
ENSGAGG00000015232	-	68	45.223	ENSMZEG00005028563	-	85	45.223	Maylandia_zebra
ENSGAGG00000015232	-	59	48.780	ENSMZEG00005023565	-	63	48.780	Maylandia_zebra
ENSGAGG00000015232	-	75	32.340	ENSMZEG00005003951	-	91	32.340	Maylandia_zebra
ENSGAGG00000015232	-	69	40.244	ENSMZEG00005022884	-	90	40.244	Maylandia_zebra
ENSGAGG00000015232	-	50	40.708	ENSMMOG00000005437	-	52	40.708	Mola_mola
ENSGAGG00000015232	-	68	46.452	ENSMMOG00000009252	-	64	46.452	Mola_mola
ENSGAGG00000015232	-	81	48.936	ENSMALG00000005696	-	51	47.436	Monopterus_albus
ENSGAGG00000015232	-	84	39.806	ENSMALG00000010959	-	91	47.664	Monopterus_albus
ENSGAGG00000015232	-	71	45.902	ENSMALG00000002956	-	100	45.902	Monopterus_albus
ENSGAGG00000015232	-	68	46.452	ENSMALG00000011756	-	63	46.452	Monopterus_albus
ENSGAGG00000015232	-	68	47.826	ENSNBRG00000019004	-	85	46.341	Neolamprologus_brichardi
ENSGAGG00000015232	-	68	45.926	ENSNBRG00000024179	-	61	45.926	Neolamprologus_brichardi
ENSGAGG00000015232	-	59	41.071	ENSNBRG00000004723	-	83	41.071	Neolamprologus_brichardi
ENSGAGG00000015232	-	68	45.070	ENSONIG00000019139	-	100	45.070	Oreochromis_niloticus
ENSGAGG00000015232	-	68	56.552	ENSONIG00000020667	-	96	56.552	Oreochromis_niloticus
ENSGAGG00000015232	-	61	45.946	ENSONIG00000015024	-	80	45.946	Oreochromis_niloticus
ENSGAGG00000015232	-	55	44.586	ENSONIG00000014012	-	90	44.586	Oreochromis_niloticus
ENSGAGG00000015232	-	69	50.980	ENSONIG00000012374	-	96	45.652	Oreochromis_niloticus
ENSGAGG00000015232	-	68	43.846	ENSONIG00000001986	-	96	43.846	Oreochromis_niloticus
ENSGAGG00000015232	-	68	57.241	ENSONIG00000008297	-	92	57.241	Oreochromis_niloticus
ENSGAGG00000015232	-	66	45.000	ENSORLG00000012581	-	63	45.000	Oryzias_latipes
ENSGAGG00000015232	-	70	49.624	ENSOMEG00000015179	-	63	49.624	Oryzias_melastigma
ENSGAGG00000015232	-	68	48.718	ENSPKIG00000015951	-	70	48.718	Paramormyrops_kingsleyae
ENSGAGG00000015232	-	59	46.218	ENSPMGG00000008518	-	86	46.218	Periophthalmus_magnuspinnatus
ENSGAGG00000015232	-	66	48.120	ENSPMGG00000020606	-	91	48.120	Periophthalmus_magnuspinnatus
ENSGAGG00000015232	-	99	34.459	ENSPMGG00000011591	-	79	34.459	Periophthalmus_magnuspinnatus
ENSGAGG00000015232	-	99	45.161	ENSPFOG00000000667	-	72	45.161	Poecilia_formosa
ENSGAGG00000015232	-	68	46.108	ENSPFOG00000018771	-	62	46.108	Poecilia_formosa
ENSGAGG00000015232	-	59	47.727	ENSPLAG00000005106	-	65	47.727	Poecilia_latipinna
ENSGAGG00000015232	-	99	45.806	ENSPLAG00000013745	-	94	55.357	Poecilia_latipinna
ENSGAGG00000015232	-	68	45.860	ENSPMEG00000022651	-	61	45.860	Poecilia_mexicana
ENSGAGG00000015232	-	67	44.167	ENSPMEG00000020864	-	84	44.167	Poecilia_mexicana
ENSGAGG00000015232	-	68	46.341	ENSPNYG00000019325	-	73	39.320	Pundamilia_nyererei
ENSGAGG00000015232	-	88	44.286	ENSPNYG00000016157	-	56	44.286	Pundamilia_nyererei
ENSGAGG00000015232	-	59	41.618	ENSPNYG00000003834	-	84	41.618	Pundamilia_nyererei
ENSGAGG00000015232	-	68	46.377	ENSPNYG00000011024	-	64	46.377	Pundamilia_nyererei
ENSGAGG00000015232	-	64	46.763	ENSPNYG00000020737	-	80	46.763	Pundamilia_nyererei
ENSGAGG00000015232	-	67	43.590	ENSPNAG00000011660	-	55	43.590	Pygocentrus_nattereri
ENSGAGG00000015232	-	69	43.077	ENSPNAG00000025882	-	63	43.114	Pygocentrus_nattereri
ENSGAGG00000015232	-	61	48.305	ENSPNAG00000010850	-	83	46.667	Pygocentrus_nattereri
ENSGAGG00000015232	-	67	49.020	ENSSFOG00015006083	-	56	49.020	Scleropages_formosus
ENSGAGG00000015232	-	85	40.000	ENSSMAG00000013663	-	96	45.614	Scophthalmus_maximus
ENSGAGG00000015232	-	68	38.519	ENSSMAG00000004429	-	83	38.519	Scophthalmus_maximus
ENSGAGG00000015232	-	70	48.387	ENSSMAG00000013828	-	60	48.387	Scophthalmus_maximus
ENSGAGG00000015232	-	70	48.148	ENSSDUG00000015013	-	72	47.742	Seriola_dumerili
ENSGAGG00000015232	-	68	47.771	ENSSDUG00000023764	-	96	47.771	Seriola_dumerili
ENSGAGG00000015232	-	64	45.926	ENSSDUG00000023765	-	82	45.926	Seriola_dumerili
ENSGAGG00000015232	-	70	48.148	ENSSLDG00000021278	-	72	47.742	Seriola_lalandi_dorsalis
ENSGAGG00000015232	-	70	43.902	ENSSPAG00000007691	-	75	43.902	Stegastes_partitus
ENSGAGG00000015232	-	70	48.148	ENSSPAG00000007403	-	92	56.522	Stegastes_partitus
ENSGAGG00000015232	-	59	50.980	ENSSPAG00000008950	-	77	41.935	Stegastes_partitus
ENSGAGG00000015232	-	70	56.051	ENSTGUG00000015549	-	100	56.051	Taeniopygia_guttata
ENSGAGG00000015232	-	70	62.411	ENSTGUG00000018254	-	99	62.411	Taeniopygia_guttata
ENSGAGG00000015232	-	67	60.870	ENSTGUG00000018439	-	100	60.870	Taeniopygia_guttata
ENSGAGG00000015232	-	60	45.732	ENSTRUG00000023491	-	60	45.732	Takifugu_rubripes
ENSGAGG00000015232	-	68	45.223	ENSTNIG00000002344	-	100	45.223	Tetraodon_nigroviridis
ENSGAGG00000015232	-	59	40.845	ENSXCOG00000013306	-	60	40.845	Xiphophorus_couchianus
ENSGAGG00000015232	-	59	47.872	ENSXCOG00000011372	-	69	47.872	Xiphophorus_couchianus
ENSGAGG00000015232	-	59	46.226	ENSXCOG00000020769	-	81	46.226	Xiphophorus_couchianus
ENSGAGG00000015232	-	79	35.976	ENSXMAG00000025174	-	64	35.976	Xiphophorus_maculatus
ENSGAGG00000015232	-	68	45.860	ENSXMAG00000024973	-	64	45.860	Xiphophorus_maculatus