EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000015276 (Gene tree)
Gene ID: -
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 18109 bases
Position: chrPPEB01007870.1:9602-27710
Accession: 21185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000020748	CAF1	PF04857.20	1.2e-77	1	1
ENSGAGP00000020746	CAF1	PF04857.20	1.4e-77	1	1
ENSGAGP00000020749	CAF1	PF04857.20	8.6e-70	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000023635	PNLDC1-203	2135	-	ENSGAGP00000020749	480 (aa)	-	-
ENSGAGT00000023634	PNLDC1-202	1860	-	ENSGAGP00000020748	508 (aa)	-	-
ENSGAGT00000023632	PNLDC1-201	1679	-	ENSGAGP00000020746	531 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000015276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000015276's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000015276	PNLDC1	100	67.355	ENSG00000146453	PNLDC1	99	66.408	Homo_sapiens
ENSGAGG00000015276	PNLDC1	100	67.355	ENSAMEG00000015371	PNLDC1	99	66.098	Ailuropoda_melanoleuca
ENSGAGG00000015276	PNLDC1	100	70.928	ENSAPLG00000007014	PNLDC1	97	71.203	Anas_platyrhynchos
ENSGAGG00000015276	PNLDC1	100	67.500	ENSACAG00000013667	PNLDC1	99	67.110	Anolis_carolinensis
ENSGAGG00000015276	PNLDC1	100	66.322	ENSANAG00000034713	PNLDC1	100	65.430	Aotus_nancymaae
ENSGAGG00000015276	PNLDC1	100	68.595	ENSBTAG00000015166	PNLDC1	95	67.525	Bos_taurus
ENSGAGG00000015276	PNLDC1	100	65.909	ENSCJAG00000011865	PNLDC1	99	65.476	Callithrix_jacchus
ENSGAGG00000015276	PNLDC1	100	67.975	ENSCAFG00000000740	PNLDC1	99	67.045	Canis_familiaris
ENSGAGG00000015276	PNLDC1	100	66.529	ENSCAFG00020017742	PNLDC1	99	65.530	Canis_lupus_dingo
ENSGAGG00000015276	PNLDC1	100	65.988	ENSCHIG00000003141	PNLDC1	99	64.618	Capra_hircus
ENSGAGG00000015276	PNLDC1	100	66.322	ENSTSYG00000005606	PNLDC1	99	64.906	Carlito_syrichta
ENSGAGG00000015276	PNLDC1	100	48.456	ENSCAPG00000011893	PNLDC1	99	48.507	Cavia_aperea
ENSGAGG00000015276	PNLDC1	100	62.474	ENSCPOG00000019565	PNLDC1	99	60.829	Cavia_porcellus
ENSGAGG00000015276	PNLDC1	100	65.702	ENSCCAG00000026232	PNLDC1	99	64.528	Cebus_capucinus
ENSGAGG00000015276	PNLDC1	100	67.355	ENSCATG00000033196	PNLDC1	99	66.226	Cercocebus_atys
ENSGAGG00000015276	PNLDC1	100	67.355	ENSCLAG00000003228	PNLDC1	99	66.226	Chinchilla_lanigera
ENSGAGG00000015276	PNLDC1	100	66.461	ENSCSAG00000012478	PNLDC1	99	65.637	Chlorocebus_sabaeus
ENSGAGG00000015276	PNLDC1	100	96.667	ENSCPBG00000004050	PNLDC1	100	96.260	Chrysemys_picta_bellii
ENSGAGG00000015276	PNLDC1	100	67.562	ENSCANG00000043076	PNLDC1	99	66.731	Colobus_angolensis_palliatus
ENSGAGG00000015276	PNLDC1	100	53.402	ENSCGRG00001011981	-	99	52.166	Cricetulus_griseus_chok1gshd
ENSGAGG00000015276	PNLDC1	100	66.322	ENSCGRG00001007470	-	99	64.151	Cricetulus_griseus_chok1gshd
ENSGAGG00000015276	PNLDC1	100	54.845	ENSCGRG00000003103	-	99	53.484	Cricetulus_griseus_crigri
ENSGAGG00000015276	PNLDC1	100	66.322	ENSCGRG00000010221	-	99	64.151	Cricetulus_griseus_crigri
ENSGAGG00000015276	PNLDC1	100	68.660	ENSDNOG00000013709	PNLDC1	99	67.358	Dasypus_novemcinctus
ENSGAGG00000015276	PNLDC1	100	62.474	ENSDORG00000011517	Pnldc1	99	64.423	Dipodomys_ordii
ENSGAGG00000015276	PNLDC1	99	60.663	ENSETEG00000007587	PNLDC1	98	60.700	Echinops_telfairi
ENSGAGG00000015276	PNLDC1	100	61.711	ENSEASG00005019029	PNLDC1	99	61.381	Equus_asinus_asinus
ENSGAGG00000015276	PNLDC1	100	67.355	ENSECAG00000012898	PNLDC1	99	66.477	Equus_caballus
ENSGAGG00000015276	PNLDC1	74	64.516	ENSEEUG00000005717	-	85	64.516	Erinaceus_europaeus
ENSGAGG00000015276	PNLDC1	100	68.802	ENSFCAG00000002848	PNLDC1	99	67.992	Felis_catus
ENSGAGG00000015276	PNLDC1	100	67.909	ENSFALG00000012081	PNLDC1	99	68.064	Ficedula_albicollis
ENSGAGG00000015276	PNLDC1	100	66.116	ENSFDAG00000021334	PNLDC1	99	65.094	Fukomys_damarensis
ENSGAGG00000015276	PNLDC1	83	68.305	ENSGALG00000011624	PNLDC1	85	67.126	Gallus_gallus
ENSGAGG00000015276	PNLDC1	100	66.942	ENSGGOG00000014077	PNLDC1	99	65.849	Gorilla_gorilla
ENSGAGG00000015276	PNLDC1	100	66.942	ENSHGLG00000006889	PNLDC1	99	65.849	Heterocephalus_glaber_female
ENSGAGG00000015276	PNLDC1	100	66.942	ENSHGLG00100018275	PNLDC1	99	65.849	Heterocephalus_glaber_male
ENSGAGG00000015276	PNLDC1	100	68.388	ENSSTOG00000005595	PNLDC1	99	67.170	Ictidomys_tridecemlineatus
ENSGAGG00000015276	PNLDC1	100	62.397	ENSJJAG00000009937	Pnldc1	99	61.626	Jaculus_jaculus
ENSGAGG00000015276	PNLDC1	61	65.190	ENSLAFG00000030189	PNLDC1	92	65.190	Loxodonta_africana
ENSGAGG00000015276	PNLDC1	100	67.355	ENSMFAG00000041296	PNLDC1	99	66.415	Macaca_fascicularis
ENSGAGG00000015276	PNLDC1	100	67.355	ENSMMUG00000004181	PNLDC1	99	66.415	Macaca_mulatta
ENSGAGG00000015276	PNLDC1	100	67.355	ENSMNEG00000034271	PNLDC1	99	66.226	Macaca_nemestrina
ENSGAGG00000015276	PNLDC1	100	64.256	ENSMLEG00000044059	PNLDC1	99	63.396	Mandrillus_leucophaeus
ENSGAGG00000015276	PNLDC1	100	69.647	ENSMGAG00000012470	PNLDC1	97	69.980	Meleagris_gallopavo
ENSGAGG00000015276	PNLDC1	100	56.017	ENSMAUG00000012298	Pnldc1	99	55.133	Mesocricetus_auratus
ENSGAGG00000015276	PNLDC1	100	65.909	ENSMICG00000008021	PNLDC1	99	65.094	Microcebus_murinus
ENSGAGG00000015276	PNLDC1	100	66.598	ENSMOCG00000014287	Pnldc1	99	65.543	Microtus_ochrogaster
ENSGAGG00000015276	PNLDC1	100	71.901	ENSMODG00000007420	PNLDC1	99	70.810	Monodelphis_domestica
ENSGAGG00000015276	PNLDC1	100	66.942	MGP_CAROLIEiJ_G0021045	Pnldc1	99	65.720	Mus_caroli
ENSGAGG00000015276	PNLDC1	100	67.149	ENSMUSG00000073460	Pnldc1	99	66.667	Mus_musculus
ENSGAGG00000015276	PNLDC1	100	67.562	MGP_PahariEiJ_G0023361	Pnldc1	99	66.226	Mus_pahari
ENSGAGG00000015276	PNLDC1	100	66.736	MGP_SPRETEiJ_G0021975	Pnldc1	99	65.530	Mus_spretus
ENSGAGG00000015276	PNLDC1	100	67.562	ENSMPUG00000004920	PNLDC1	99	66.477	Mustela_putorius_furo
ENSGAGG00000015276	PNLDC1	100	68.388	ENSMLUG00000000747	PNLDC1	99	67.803	Myotis_lucifugus
ENSGAGG00000015276	PNLDC1	100	67.769	ENSNGAG00000017714	Pnldc1	99	66.415	Nannospalax_galili
ENSGAGG00000015276	PNLDC1	100	66.736	ENSNLEG00000011282	PNLDC1	97	66.733	Nomascus_leucogenys
ENSGAGG00000015276	PNLDC1	66	57.944	ENSMEUG00000011926	-	64	57.944	Notamacropus_eugenii
ENSGAGG00000015276	PNLDC1	60	62.630	ENSMEUG00000014042	-	100	62.630	Notamacropus_eugenii
ENSGAGG00000015276	PNLDC1	79	65.084	ENSOPRG00000003813	PNLDC1	70	64.706	Ochotona_princeps
ENSGAGG00000015276	PNLDC1	100	66.736	ENSODEG00000008047	PNLDC1	99	65.660	Octodon_degus
ENSGAGG00000015276	PNLDC1	100	57.025	ENSOANG00000012199	PNLDC1	99	57.358	Ornithorhynchus_anatinus
ENSGAGG00000015276	PNLDC1	100	67.975	ENSOCUG00000013867	PNLDC1	99	67.045	Oryctolagus_cuniculus
ENSGAGG00000015276	PNLDC1	100	67.355	ENSOGAG00000007331	PNLDC1	100	66.415	Otolemur_garnettii
ENSGAGG00000015276	PNLDC1	100	66.322	ENSOARG00000004585	PNLDC1	99	64.906	Ovis_aries
ENSGAGG00000015276	PNLDC1	100	66.736	ENSPPAG00000026651	PNLDC1	99	65.660	Pan_paniscus
ENSGAGG00000015276	PNLDC1	100	69.008	ENSPPRG00000012854	PNLDC1	99	68.371	Panthera_pardus
ENSGAGG00000015276	PNLDC1	100	67.149	ENSPTIG00000011501	PNLDC1	98	65.333	Panthera_tigris_altaica
ENSGAGG00000015276	PNLDC1	100	66.736	ENSPTRG00000018762	PNLDC1	99	65.825	Pan_troglodytes
ENSGAGG00000015276	PNLDC1	100	67.355	ENSPANG00000022009	PNLDC1	99	66.226	Papio_anubis
ENSGAGG00000015276	PNLDC1	53	91.765	ENSPSIG00000011419	PNLDC1	86	91.765	Pelodiscus_sinensis
ENSGAGG00000015276	PNLDC1	100	67.562	ENSPEMG00000016301	Pnldc1	99	66.477	Peromyscus_maniculatus_bairdii
ENSGAGG00000015276	PNLDC1	90	72.748	ENSPCIG00000023412	PNLDC1	98	72.748	Phascolarctos_cinereus
ENSGAGG00000015276	PNLDC1	100	61.759	ENSPPYG00000017148	PNLDC1	99	61.121	Pongo_abelii
ENSGAGG00000015276	PNLDC1	100	60.331	ENSPCAG00000014169	PNLDC1	99	59.659	Procavia_capensis
ENSGAGG00000015276	PNLDC1	100	66.322	ENSPCOG00000025722	PNLDC1	99	65.472	Propithecus_coquereli
ENSGAGG00000015276	PNLDC1	75	69.870	ENSPVAG00000005325	PNLDC1	72	69.870	Pteropus_vampyrus
ENSGAGG00000015276	PNLDC1	73	30.105	ENSPVAG00000002547	PARN	58	30.105	Pteropus_vampyrus
ENSGAGG00000015276	PNLDC1	100	67.355	ENSRNOG00000023140	Pnldc1	99	66.288	Rattus_norvegicus
ENSGAGG00000015276	PNLDC1	100	67.769	ENSRBIG00000033806	PNLDC1	99	66.667	Rhinopithecus_bieti
ENSGAGG00000015276	PNLDC1	100	67.769	ENSRROG00000043919	PNLDC1	99	66.925	Rhinopithecus_roxellana
ENSGAGG00000015276	PNLDC1	100	66.116	ENSSBOG00000019135	PNLDC1	99	64.906	Saimiri_boliviensis_boliviensis
ENSGAGG00000015276	PNLDC1	100	71.694	ENSSHAG00000015192	PNLDC1	98	71.037	Sarcophilus_harrisii
ENSGAGG00000015276	PNLDC1	59	83.333	ENSSPUG00000004627	PNLDC1	100	81.250	Sphenodon_punctatus
ENSGAGG00000015276	PNLDC1	100	65.979	ENSSSCG00000004046	PNLDC1	98	65.675	Sus_scrofa
ENSGAGG00000015276	PNLDC1	97	68.817	ENSTGUG00000011418	PNLDC1	99	68.944	Taeniopygia_guttata
ENSGAGG00000015276	PNLDC1	100	58.471	ENSTBEG00000009131	PNLDC1	97	58.614	Tupaia_belangeri
ENSGAGG00000015276	PNLDC1	75	65.104	ENSTTRG00000010409	PNLDC1	72	65.104	Tursiops_truncatus
ENSGAGG00000015276	PNLDC1	100	56.274	ENSUAMG00000015783	PNLDC1	99	56.089	Ursus_americanus
ENSGAGG00000015276	PNLDC1	100	62.146	ENSUMAG00000011903	PNLDC1	99	61.914	Ursus_maritimus
ENSGAGG00000015276	PNLDC1	100	67.975	ENSVVUG00000006586	PNLDC1	98	68.182	Vulpes_vulpes