EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000015451 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 2007 bases
Position: chrPPEB01014568.1:8144-10150
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000021042	zf-C2H2	PF00096.26	8.8e-51	1	9
ENSGAGP00000021042	zf-C2H2	PF00096.26	8.8e-51	2	9
ENSGAGP00000021042	zf-C2H2	PF00096.26	8.8e-51	3	9
ENSGAGP00000021042	zf-C2H2	PF00096.26	8.8e-51	4	9
ENSGAGP00000021042	zf-C2H2	PF00096.26	8.8e-51	5	9
ENSGAGP00000021042	zf-C2H2	PF00096.26	8.8e-51	6	9
ENSGAGP00000021042	zf-C2H2	PF00096.26	8.8e-51	7	9
ENSGAGP00000021042	zf-C2H2	PF00096.26	8.8e-51	8	9
ENSGAGP00000021042	zf-C2H2	PF00096.26	8.8e-51	9	9
ENSGAGP00000021042	zf-met	PF12874.7	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000023963	-	1041	-	ENSGAGP00000021042	346 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000015451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000015451's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000015451	-	90	70.811	ENSGAGG00000004740	-	87	70.811
ENSGAGG00000015451	-	88	53.143	ENSGAGG00000004926	-	97	51.295
ENSGAGG00000015451	-	89	66.558	ENSGAGG00000007230	-	82	66.558
ENSGAGG00000015451	-	90	64.192	ENSGAGG00000011574	-	81	59.807
ENSGAGG00000015451	-	88	50.000	ENSGAGG00000001387	-	61	53.684
ENSGAGG00000015451	-	84	71.613	ENSGAGG00000015232	-	68	71.613
ENSGAGG00000015451	-	97	58.416	ENSGAGG00000001645	-	81	57.692
ENSGAGG00000015451	-	98	63.123	ENSGAGG00000010833	-	95	63.123
ENSGAGG00000015451	-	96	54.450	ENSGAGG00000006848	-	70	53.403
ENSGAGG00000015451	-	97	60.664	ENSGAGG00000002179	-	100	58.099
ENSGAGG00000015451	-	88	60.086	ENSGAGG00000005805	-	100	60.086
ENSGAGG00000015451	-	81	45.161	ENSGAGG00000021327	GFI1B	51	45.638
ENSGAGG00000015451	-	95	55.862	ENSGAGG00000006323	-	93	57.333
ENSGAGG00000015451	-	80	48.101	ENSGAGG00000019591	ZNF770	63	37.647
ENSGAGG00000015451	-	99	71.192	ENSGAGG00000020594	-	96	71.192
ENSGAGG00000015451	-	88	57.692	ENSGAGG00000011487	-	82	55.849
ENSGAGG00000015451	-	98	59.259	ENSGAGG00000002214	-	96	60.223
ENSGAGG00000015451	-	85	58.576	ENSGAGG00000001469	-	94	58.576
ENSGAGG00000015451	-	86	62.000	ENSGAGG00000019349	-	79	63.300
ENSGAGG00000015451	-	99	58.503	ENSGAGG00000020134	-	71	58.503
ENSGAGG00000015451	-	90	49.474	ENSGAGG00000003883	ZNF236	57	49.474
ENSGAGG00000015451	-	89	65.646	ENSGAGG00000014389	-	96	67.213
ENSGAGG00000015451	-	83	50.980	ENSGAGG00000013021	-	98	50.980
ENSGAGG00000015451	-	84	51.370	ENSGAGG00000020168	-	74	51.370
ENSGAGG00000015451	-	84	56.557	ENSGAGG00000018445	-	78	56.557
ENSGAGG00000015451	-	90	48.760	ENSGAGG00000017094	-	55	48.760
ENSGAGG00000015451	-	99	65.667	ENSGAGG00000008773	-	98	65.667
ENSGAGG00000015451	-	81	46.847	ENSGAGG00000015200	MYNN	50	44.033
ENSGAGG00000015451	-	89	68.030	ENSGAGG00000012452	-	69	62.500
ENSGAGG00000015451	-	88	71.521	ENSGAGG00000006683	-	99	69.536
ENSGAGG00000015451	-	83	54.150	ENSGAGG00000011366	-	97	54.150
ENSGAGG00000015451	-	90	62.882	ENSGAGG00000009272	-	97	59.426
ENSGAGG00000015451	-	89	61.774	ENSGAGG00000013851	-	80	61.774
ENSGAGG00000015451	-	83	63.006	ENSGAGG00000010492	-	77	63.006
ENSGAGG00000015451	-	99	45.977	ENSGAGG00000017640	-	93	51.639
ENSGAGG00000015451	-	90	68.992	ENSGAGG00000017986	-	94	64.396
ENSGAGG00000015451	-	89	51.534	ENSGAGG00000005331	-	81	51.534
ENSGAGG00000015451	-	88	55.512	ENSGAGG00000018885	-	65	55.512
ENSGAGG00000015451	-	91	63.636	ENSGAGG00000016529	-	93	67.081
ENSGAGG00000015451	-	84	41.353	ENSGAGG00000022571	ZNF319	93	41.353
ENSGAGG00000015451	-	81	66.946	ENSGAGG00000009739	-	99	66.946
ENSGAGG00000015451	-	90	57.874	ENSGAGG00000010324	-	81	57.285
ENSGAGG00000015451	-	98	55.597	ENSGAGG00000002828	-	90	55.597
ENSGAGG00000015451	-	88	70.866	ENSGAGG00000006960	-	82	67.219
ENSGAGG00000015451	-	92	55.376	ENSGAGG00000006846	-	87	54.054
ENSGAGG00000015451	-	82	43.119	ENSGAGG00000003095	ZNF865	80	38.182
ENSGAGG00000015451	-	95	57.227	ENSGAGG00000014356	-	89	61.277
ENSGAGG00000015451	-	83	36.863	ENSGAGG00000020362	PRDM5	71	34.643
ENSGAGG00000015451	-	83	66.029	ENSGAGG00000000971	-	92	65.234
ENSGAGG00000015451	-	87	54.321	ENSGAGG00000011399	-	96	54.321

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000015451	-	83	56.420	ENSAPLG00000012660	-	81	56.420	Anas_platyrhynchos
ENSGAGG00000015451	-	89	50.179	ENSAMXG00000037143	-	95	50.482	Astyanax_mexicanus
ENSGAGG00000015451	-	82	63.478	ENSAMXG00000037703	-	85	63.478	Astyanax_mexicanus
ENSGAGG00000015451	-	83	54.494	ENSAMXG00000019489	-	93	54.902	Astyanax_mexicanus
ENSGAGG00000015451	-	84	58.478	ENSAMXG00000025455	-	98	58.478	Astyanax_mexicanus
ENSGAGG00000015451	-	82	58.065	ENSAMXG00000004610	-	96	58.065	Astyanax_mexicanus
ENSGAGG00000015451	-	88	56.485	ENSAMXG00000003002	-	89	56.485	Astyanax_mexicanus
ENSGAGG00000015451	-	95	53.287	ENSAMXG00000040212	-	96	53.287	Astyanax_mexicanus
ENSGAGG00000015451	-	82	55.862	ENSAMXG00000031489	-	94	58.015	Astyanax_mexicanus
ENSGAGG00000015451	-	88	55.344	ENSAMXG00000001626	-	93	55.344	Astyanax_mexicanus
ENSGAGG00000015451	-	90	61.765	ENSAMXG00000029878	-	91	61.765	Astyanax_mexicanus
ENSGAGG00000015451	-	83	56.716	ENSAMXG00000032619	-	96	56.716	Astyanax_mexicanus
ENSGAGG00000015451	-	84	58.209	ENSAMXG00000038453	-	84	58.209	Astyanax_mexicanus
ENSGAGG00000015451	-	96	55.017	ENSAMXG00000039752	-	91	55.431	Astyanax_mexicanus
ENSGAGG00000015451	-	85	54.651	ENSAMXG00000043978	-	86	54.651	Astyanax_mexicanus
ENSGAGG00000015451	-	82	59.701	ENSAMXG00000011804	-	83	59.701	Astyanax_mexicanus
ENSGAGG00000015451	-	88	58.824	ENSAMXG00000035690	-	70	58.824	Astyanax_mexicanus
ENSGAGG00000015451	-	85	54.138	ENSAMXG00000026142	-	85	54.380	Astyanax_mexicanus
ENSGAGG00000015451	-	84	56.170	ENSAMXG00000026144	-	92	56.170	Astyanax_mexicanus
ENSGAGG00000015451	-	82	59.048	ENSAMXG00000033124	-	67	53.521	Astyanax_mexicanus
ENSGAGG00000015451	-	84	54.132	ENSAMXG00000037326	-	96	54.132	Astyanax_mexicanus
ENSGAGG00000015451	-	92	57.721	ENSAMXG00000041725	-	94	57.721	Astyanax_mexicanus
ENSGAGG00000015451	-	82	57.746	ENSCPBG00000002014	-	58	57.746	Chrysemys_picta_bellii
ENSGAGG00000015451	-	94	60.554	ENSEASG00005020341	-	96	60.554	Equus_asinus_asinus
ENSGAGG00000015451	-	96	63.197	ENSECAG00000039445	-	96	63.197	Equus_caballus
ENSGAGG00000015451	-	90	60.554	ENSECAG00000017293	-	96	60.554	Equus_caballus
ENSGAGG00000015451	-	83	58.130	ENSIPUG00000015177	-	53	58.130	Ictalurus_punctatus
ENSGAGG00000015451	-	97	58.167	ENSIPUG00000015400	-	89	57.045	Ictalurus_punctatus
ENSGAGG00000015451	-	88	57.292	ENSMPUG00000008437	-	90	57.292	Mustela_putorius_furo
ENSGAGG00000015451	-	93	56.489	ENSPTIG00000009259	-	97	58.725	Panthera_tigris_altaica
ENSGAGG00000015451	-	92	60.181	ENSPSIG00000016247	-	61	60.181	Pelodiscus_sinensis
ENSGAGG00000015451	-	83	54.630	ENSPNAG00000024704	-	94	54.150	Pygocentrus_nattereri
ENSGAGG00000015451	-	88	56.318	ENSPNAG00000005914	-	74	56.318	Pygocentrus_nattereri
ENSGAGG00000015451	-	82	50.282	ENSPNAG00000029386	-	83	52.985	Pygocentrus_nattereri
ENSGAGG00000015451	-	83	63.514	ENSPNAG00000007072	-	87	63.514	Pygocentrus_nattereri
ENSGAGG00000015451	-	92	52.667	ENSPNAG00000017479	-	89	52.667	Pygocentrus_nattereri
ENSGAGG00000015451	-	83	55.797	ENSPNAG00000008653	-	96	59.363	Pygocentrus_nattereri
ENSGAGG00000015451	-	82	62.338	ENSPNAG00000012138	-	91	62.338	Pygocentrus_nattereri
ENSGAGG00000015451	-	83	63.348	ENSPNAG00000016025	-	88	63.348	Pygocentrus_nattereri
ENSGAGG00000015451	-	84	56.017	ENSPNAG00000021942	-	92	56.017	Pygocentrus_nattereri
ENSGAGG00000015451	-	83	57.977	ENSPNAG00000002287	-	95	54.717	Pygocentrus_nattereri
ENSGAGG00000015451	-	84	61.826	ENSPNAG00000018437	-	72	61.826	Pygocentrus_nattereri
ENSGAGG00000015451	-	96	55.978	ENSPNAG00000028765	-	88	55.978	Pygocentrus_nattereri
ENSGAGG00000015451	-	91	53.251	ENSPNAG00000016045	-	74	53.251	Pygocentrus_nattereri
ENSGAGG00000015451	-	93	59.231	ENSPNAG00000018471	-	86	59.231	Pygocentrus_nattereri
ENSGAGG00000015451	-	80	59.624	ENSPNAG00000003919	-	95	58.167	Pygocentrus_nattereri
ENSGAGG00000015451	-	82	56.180	ENSPNAG00000012366	-	90	55.294	Pygocentrus_nattereri
ENSGAGG00000015451	-	89	60.236	ENSPNAG00000003526	-	82	60.236	Pygocentrus_nattereri
ENSGAGG00000015451	-	89	56.109	ENSPNAG00000017455	-	92	56.109	Pygocentrus_nattereri
ENSGAGG00000015451	-	93	50.676	ENSPNAG00000000783	-	99	50.676	Pygocentrus_nattereri
ENSGAGG00000015451	-	84	61.458	ENSUAMG00000027415	-	90	60.280	Ursus_americanus
ENSGAGG00000015451	-	98	58.163	ENSUAMG00000027384	-	92	57.085	Ursus_americanus
ENSGAGG00000015451	-	83	58.478	ENSVPAG00000002698	-	99	58.478	Vicugna_pacos