EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000015642 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 37410 bases
Position: chrPPEB01000150.1:69565-106974
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000021306	MMR_HSR1	PF01926.23	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000024266	-	2598	-	ENSGAGP00000021306	206 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000015642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000015642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000015642	-	79	44.785	ENSGAGG00000000742	-	81	44.785
ENSGAGG00000015642	-	89	37.368	ENSGAGG00000002936	RAB33B	84	37.368
ENSGAGG00000015642	-	96	41.546	ENSGAGG00000020703	RAB25	96	41.546
ENSGAGG00000015642	-	78	47.531	ENSGAGG00000020702	-	75	47.531
ENSGAGG00000015642	-	79	39.759	ENSGAGG00000012314	RAB9B	83	39.759
ENSGAGG00000015642	-	77	40.373	ENSGAGG00000004918	-	79	40.373
ENSGAGG00000015642	-	78	48.148	ENSGAGG00000012557	-	74	48.148
ENSGAGG00000015642	-	81	36.310	ENSGAGG00000020094	MRAS	95	33.495
ENSGAGG00000015642	-	78	34.337	ENSGAGG00000021838	RERG	81	34.337
ENSGAGG00000015642	-	70	46.259	ENSGAGG00000009488	RAB33A	65	46.259
ENSGAGG00000015642	-	89	48.404	ENSGAGG00000023041	RAB2B	86	48.404
ENSGAGG00000015642	-	83	48.837	ENSGAGG00000017207	RAB35	95	46.114
ENSGAGG00000015642	-	84	32.955	ENSGAGG00000012473	RAB34	76	32.955
ENSGAGG00000015642	-	93	41.837	ENSGAGG00000005319	RAB5A	90	41.837
ENSGAGG00000015642	-	79	49.091	ENSGAGG00000007278	RAB12	67	49.091
ENSGAGG00000015642	-	56	33.607	ENSGAGG00000014586	ARL14	55	33.607
ENSGAGG00000015642	-	83	39.884	ENSGAGG00000008447	RAB39B	81	39.884
ENSGAGG00000015642	-	81	32.530	ENSGAGG00000019886	-	87	32.530
ENSGAGG00000015642	-	82	47.337	ENSGAGG00000004474	RAB30	83	47.337
ENSGAGG00000015642	-	52	33.645	ENSGAGG00000016932	-	80	34.746
ENSGAGG00000015642	-	87	33.149	ENSGAGG00000017673	NRAS	95	33.149
ENSGAGG00000015642	-	78	48.148	ENSGAGG00000014814	RAB11A	75	48.148
ENSGAGG00000015642	-	94	37.500	ENSGAGG00000021701	RAB6A	94	37.500
ENSGAGG00000015642	-	80	38.095	ENSGAGG00000017981	RAB9A	84	38.095
ENSGAGG00000015642	-	83	40.351	ENSGAGG00000022371	-	80	40.351
ENSGAGG00000015642	-	95	44.949	ENSGAGG00000006802	RAB1A	95	44.949
ENSGAGG00000015642	-	72	36.000	ENSGAGG00000025053	RRAS2	79	36.025
ENSGAGG00000015642	-	78	50.617	ENSGAGG00000023956	RAB1B	80	50.617
ENSGAGG00000015642	-	79	39.394	ENSGAGG00000004921	RAB42	80	39.394
ENSGAGG00000015642	-	94	40.000	ENSGAGG00000018569	RAB22A	98	40.000
ENSGAGG00000015642	-	83	36.628	ENSGAGG00000012709	RAB23	72	36.628
ENSGAGG00000015642	-	89	48.936	ENSGAGG00000005606	RAB2A	97	46.411
ENSGAGG00000015642	-	79	49.390	ENSGAGG00000004988	RAB14	76	49.390
ENSGAGG00000015642	-	86	34.444	ENSGAGG00000025340	RAB36	67	34.444
ENSGAGG00000015642	-	80	32.927	ENSGAGG00000011790	-	88	32.927
ENSGAGG00000015642	-	79	46.341	ENSGAGG00000013139	RAB19	74	46.341
ENSGAGG00000015642	-	92	31.579	ENSGAGG00000011057	KRAS	88	33.133
ENSGAGG00000015642	-	59	44.715	ENSGAGG00000020394	RAB7B	78	44.715
ENSGAGG00000015642	-	79	38.922	ENSGAGG00000012234	RAB7A	81	38.922

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000015642	-	100	86.408	ENSAPOG00000010760	rab18a	100	86.408	Acanthochromis_polyacanthus
ENSGAGG00000015642	-	100	74.272	ENSACIG00000009617	rab18a	100	74.272	Amphilophus_citrinellus
ENSGAGG00000015642	-	100	85.922	ENSAOCG00000016233	rab18a	100	85.922	Amphiprion_ocellaris
ENSGAGG00000015642	-	100	85.922	ENSAPEG00000005392	rab18a	100	85.922	Amphiprion_percula
ENSGAGG00000015642	-	100	86.893	ENSATEG00000021911	rab18a	100	86.893	Anabas_testudineus
ENSGAGG00000015642	-	100	95.146	ENSACAG00000005463	-	100	95.146	Anolis_carolinensis
ENSGAGG00000015642	-	100	84.466	ENSACLG00000011484	rab18a	100	84.466	Astatotilapia_calliptera
ENSGAGG00000015642	-	96	71.212	ENSCPBG00000027619	-	98	71.212	Chrysemys_picta_bellii
ENSGAGG00000015642	-	100	99.029	ENSCPBG00000015839	-	100	99.029	Chrysemys_picta_bellii
ENSGAGG00000015642	-	97	76.500	ENSCING00000006838	-	100	76.500	Ciona_intestinalis
ENSGAGG00000015642	-	97	74.000	ENSCSAVG00000010348	-	100	74.000	Ciona_savignyi
ENSGAGG00000015642	-	100	87.864	ENSCSEG00000011816	rab18a	100	87.864	Cynoglossus_semilaevis
ENSGAGG00000015642	-	93	88.482	ENSCVAG00000015451	rab18a	100	86.408	Cyprinodon_variegatus
ENSGAGG00000015642	-	100	81.553	ENSDARG00000055291	rab18a	100	81.553	Danio_rerio
ENSGAGG00000015642	-	100	89.320	ENSELUG00000003805	rab18a	100	89.320	Esox_lucius
ENSGAGG00000015642	-	93	87.958	ENSFHEG00000019455	rab18a	100	85.922	Fundulus_heteroclitus
ENSGAGG00000015642	-	93	87.958	ENSGAFG00000002790	rab18a	100	86.893	Gambusia_affinis
ENSGAGG00000015642	-	100	84.466	ENSHBUG00000001518	rab18a	100	84.466	Haplochromis_burtoni
ENSGAGG00000015642	-	99	85.854	ENSLBEG00000005861	rab18a	95	85.854	Labrus_bergylta
ENSGAGG00000015642	-	93	97.917	ENSLACG00000009310	rab18a	100	96.117	Latimeria_chalumnae
ENSGAGG00000015642	-	100	91.748	ENSLOCG00000007491	rab18a	100	91.748	Lepisosteus_oculatus
ENSGAGG00000015642	-	100	86.893	ENSMAMG00000014320	rab18a	100	86.893	Mastacembelus_armatus
ENSGAGG00000015642	-	100	83.981	ENSMZEG00005017235	rab18a	100	83.981	Maylandia_zebra
ENSGAGG00000015642	-	100	87.379	ENSMALG00000009813	rab18a	100	87.379	Monopterus_albus
ENSGAGG00000015642	-	100	84.466	ENSNBRG00000013507	rab18a	100	84.466	Neolamprologus_brichardi
ENSGAGG00000015642	-	93	86.387	ENSORLG00000004624	rab18a	100	83.981	Oryzias_latipes
ENSGAGG00000015642	-	93	86.911	ENSORLG00020008333	rab18a	100	84.466	Oryzias_latipes_hni
ENSGAGG00000015642	-	93	86.387	ENSORLG00015004739	rab18a	100	83.981	Oryzias_latipes_hsok
ENSGAGG00000015642	-	93	86.387	ENSOMEG00000020605	rab18a	100	84.466	Oryzias_melastigma
ENSGAGG00000015642	-	100	88.835	ENSPKIG00000009825	rab18a	100	88.835	Paramormyrops_kingsleyae
ENSGAGG00000015642	-	100	83.010	ENSPMGG00000020409	-	100	84.466	Periophthalmus_magnuspinnatus
ENSGAGG00000015642	-	93	87.958	ENSPFOG00000007571	rab18a	100	86.893	Poecilia_formosa
ENSGAGG00000015642	-	93	87.958	ENSPLAG00000010104	rab18a	100	86.893	Poecilia_latipinna
ENSGAGG00000015642	-	93	87.958	ENSPMEG00000013085	rab18a	100	86.893	Poecilia_mexicana
ENSGAGG00000015642	-	93	87.958	ENSPREG00000005923	rab18a	83	86.893	Poecilia_reticulata
ENSGAGG00000015642	-	100	84.466	ENSPNYG00000007064	rab18a	100	84.466	Pundamilia_nyererei
ENSGAGG00000015642	-	99	82.759	ENSPNAG00000011548	rab18a	100	82.759	Pygocentrus_nattereri
ENSGAGG00000015642	-	100	89.806	ENSSFOG00015017444	rab18a	84	90.291	Scleropages_formosus
ENSGAGG00000015642	-	93	89.062	ENSSMAG00000002969	rab18a	100	86.473	Scophthalmus_maximus
ENSGAGG00000015642	-	93	89.529	ENSSDUG00000003823	rab18a	100	86.893	Seriola_dumerili
ENSGAGG00000015642	-	93	89.529	ENSSLDG00000006977	rab18a	100	86.893	Seriola_lalandi_dorsalis
ENSGAGG00000015642	-	100	95.631	ENSSPUG00000017677	-	100	95.631	Sphenodon_punctatus
ENSGAGG00000015642	-	100	84.951	ENSTRUG00000004984	rab18a	100	84.951	Takifugu_rubripes
ENSGAGG00000015642	-	100	94.175	ENSUMAG00000015574	-	100	94.175	Ursus_maritimus
ENSGAGG00000015642	-	100	91.262	ENSXETG00000004556	rab18	100	91.262	Xenopus_tropicalis
ENSGAGG00000015642	-	93	88.482	ENSXMAG00000024122	rab18a	100	87.379	Xiphophorus_maculatus