EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000015899 (Gene tree)
Gene ID: -
Gene Symbol: GFI1
Alias: GFI-1|GFI1A|ZNF163
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 3652 bases
Position: chrPPEB01000152.1:474630-478281
Accession: 4237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000021663	zf-C2H2	PF00096.26	1.7e-24	1	4
ENSGAGP00000021663	zf-C2H2	PF00096.26	1.7e-24	2	4
ENSGAGP00000021663	zf-C2H2	PF00096.26	1.7e-24	3	4
ENSGAGP00000021663	zf-C2H2	PF00096.26	1.7e-24	4	4
ENSGAGP00000021663	zf-met	PF12874.7	2.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000024675	GFI1-201	408	-	ENSGAGP00000021663	135 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000015899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000015899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000015899	GFI1	99	53.398	ENSGAGG00000009272	-	97	51.181
ENSGAGG00000015899	GFI1	100	49.606	ENSGAGG00000011399	-	79	49.606
ENSGAGG00000015899	GFI1	98	47.706	ENSGAGG00000017640	-	50	41.463
ENSGAGG00000015899	GFI1	98	50.000	ENSGAGG00000015232	-	55	50.000
ENSGAGG00000015899	GFI1	99	48.507	ENSGAGG00000001645	-	52	46.739
ENSGAGG00000015899	GFI1	99	45.669	ENSGAGG00000006848	-	53	45.669
ENSGAGG00000015899	GFI1	99	47.619	ENSGAGG00000006846	-	65	47.619
ENSGAGG00000015899	GFI1	99	46.457	ENSGAGG00000002179	-	64	46.457
ENSGAGG00000015899	GFI1	100	47.273	ENSGAGG00000005805	-	83	47.273
ENSGAGG00000015899	GFI1	100	41.538	ENSGAGG00000003095	ZNF865	75	41.538
ENSGAGG00000015899	GFI1	100	48.052	ENSGAGG00000004740	-	88	48.485
ENSGAGG00000015899	GFI1	100	45.679	ENSGAGG00000003883	ZNF236	51	45.679
ENSGAGG00000015899	GFI1	100	46.970	ENSGAGG00000013021	-	99	46.970
ENSGAGG00000015899	GFI1	99	48.696	ENSGAGG00000006683	-	84	48.649
ENSGAGG00000015899	GFI1	99	50.588	ENSGAGG00000010492	-	79	50.588
ENSGAGG00000015899	GFI1	98	46.324	ENSGAGG00000005331	-	67	46.324
ENSGAGG00000015899	GFI1	99	49.505	ENSGAGG00000016529	-	83	49.505
ENSGAGG00000015899	GFI1	99	51.923	ENSGAGG00000010324	-	68	45.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000015899	GFI1	100	99.259	ENSAMEG00000013858	-	92	99.259	Ailuropoda_melanoleuca
ENSGAGG00000015899	GFI1	99	72.388	ENSACIG00000002180	-	99	72.388	Amphilophus_citrinellus
ENSGAGG00000015899	GFI1	100	99.259	ENSAPLG00000015700	GFI1	50	99.259	Anas_platyrhynchos
ENSGAGG00000015899	GFI1	83	82.143	ENSACLG00000001258	-	91	82.143	Astatotilapia_calliptera
ENSGAGG00000015899	GFI1	82	82.883	ENSAMXG00000015228	-	51	82.883	Astyanax_mexicanus
ENSGAGG00000015899	GFI1	99	92.537	ENSAMXG00000006669	GFI1	54	92.537	Astyanax_mexicanus
ENSGAGG00000015899	GFI1	84	100.000	ENSCAPG00000016268	-	100	100.000	Cavia_aperea
ENSGAGG00000015899	GFI1	100	100.000	ENSCPBG00000015742	-	100	100.000	Chrysemys_picta_bellii
ENSGAGG00000015899	GFI1	99	77.612	ENSCING00000011342	-	71	77.612	Ciona_intestinalis
ENSGAGG00000015899	GFI1	100	78.519	ENSCSAVG00000005904	-	83	78.519	Ciona_savignyi
ENSGAGG00000015899	GFI1	100	99.259	ENSCGRG00000013485	-	100	99.259	Cricetulus_griseus_crigri
ENSGAGG00000015899	GFI1	100	99.259	ENSDORG00000023443	-	100	99.259	Dipodomys_ordii
ENSGAGG00000015899	GFI1	100	99.259	ENSFDAG00000019296	-	100	99.259	Fukomys_damarensis
ENSGAGG00000015899	GFI1	100	96.296	ENSIPUG00000013414	GFI1	56	96.296	Ictalurus_punctatus
ENSGAGG00000015899	GFI1	82	81.982	ENSIPUG00000021407	-	52	81.982	Ictalurus_punctatus
ENSGAGG00000015899	GFI1	84	100.000	ENSJJAG00000022622	-	100	100.000	Jaculus_jaculus
ENSGAGG00000015899	GFI1	100	99.259	ENSMMUG00000005068	GFI1	100	99.259	Macaca_mulatta
ENSGAGG00000015899	GFI1	100	99.259	ENSMAUG00000021273	-	100	99.259	Mesocricetus_auratus
ENSGAGG00000015899	GFI1	100	99.259	ENSMOCG00000004478	-	100	99.259	Microtus_ochrogaster
ENSGAGG00000015899	GFI1	100	94.815	ENSMMOG00000005556	gfi1ab	62	94.815	Mola_mola
ENSGAGG00000015899	GFI1	100	99.259	MGP_CAROLIEiJ_G0027508	Gfi1	100	99.259	Mus_caroli
ENSGAGG00000015899	GFI1	100	99.259	MGP_PahariEiJ_G0017280	Gfi1	100	99.259	Mus_pahari
ENSGAGG00000015899	GFI1	100	99.259	ENSNGAG00000002549	-	100	99.259	Nannospalax_galili
ENSGAGG00000015899	GFI1	84	80.531	ENSNBRG00000010351	-	88	80.531	Neolamprologus_brichardi
ENSGAGG00000015899	GFI1	82	79.279	ENSNBRG00000001834	-	94	79.279	Neolamprologus_brichardi
ENSGAGG00000015899	GFI1	100	99.259	ENSODEG00000006410	-	100	99.259	Octodon_degus
ENSGAGG00000015899	GFI1	100	97.778	ENSOANG00000022289	-	72	97.778	Ornithorhynchus_anatinus
ENSGAGG00000015899	GFI1	99	88.722	ENSPTIG00000002680	-	99	88.722	Panthera_tigris_altaica
ENSGAGG00000015899	GFI1	100	97.037	ENSPMGG00000012546	gfi1ab	73	97.037	Periophthalmus_magnuspinnatus
ENSGAGG00000015899	GFI1	98	93.939	ENSPMGG00000011041	GFI1	59	93.939	Periophthalmus_magnuspinnatus
ENSGAGG00000015899	GFI1	100	97.037	ENSPLAG00000010879	gfi1ab	55	97.037	Poecilia_latipinna
ENSGAGG00000015899	GFI1	83	82.143	ENSPNYG00000001775	-	88	82.143	Pundamilia_nyererei
ENSGAGG00000015899	GFI1	82	81.982	ENSPNAG00000014299	-	54	81.982	Pygocentrus_nattereri
ENSGAGG00000015899	GFI1	96	71.756	ENSSLDG00000017614	-	95	71.756	Seriola_lalandi_dorsalis
ENSGAGG00000015899	GFI1	100	97.037	ENSSPAG00000009140	gfi1ab	58	97.037	Stegastes_partitus
ENSGAGG00000015899	GFI1	100	99.259	ENSTGUG00000006060	GFI1	58	99.259	Taeniopygia_guttata
ENSGAGG00000015899	GFI1	100	99.259	ENSUMAG00000011251	-	100	99.259	Ursus_maritimus
ENSGAGG00000015899	GFI1	83	92.857	ENSXCOG00000009186	-	90	92.857	Xiphophorus_couchianus
ENSGAGG00000015899	GFI1	96	64.000	ENSXMAG00000006527	-	50	64.000	Xiphophorus_maculatus