EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000016098 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 11923 bases
Position: chrPPEB01000936.1:11186-23108
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000021923	SM-ATX	PF14438.6	6.7e-09	1	1
ENSGAGP00000021923	LSM14	PF12701.7	1.8e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000024982	-	330	-	ENSGAGP00000021923	109 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000016098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000016098's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000016098	-	94	95.098	ENSG00000257103	LSM14A	100	95.098	Homo_sapiens
ENSGAGG00000016098	-	92	89.000	ENSAPEG00000012119	lsm14aa	97	89.000	Amphiprion_percula
ENSGAGG00000016098	-	87	81.053	ENSANAG00000031175	-	94	81.053	Aotus_nancymaae
ENSGAGG00000016098	-	87	100.000	ENSANAG00000019299	-	93	100.000	Aotus_nancymaae
ENSGAGG00000016098	-	77	91.667	ENSACLG00000018221	-	83	91.667	Astatotilapia_calliptera
ENSGAGG00000016098	-	87	100.000	ENSCJAG00000010360	LSM14A	93	100.000	Callithrix_jacchus
ENSGAGG00000016098	-	87	90.526	ENSCCAG00000038098	-	94	90.526	Cebus_capucinus
ENSGAGG00000016098	-	87	85.263	ENSCCAG00000037290	-	87	85.263	Cebus_capucinus
ENSGAGG00000016098	-	87	96.842	ENSCCAG00000028536	-	95	96.842	Cebus_capucinus
ENSGAGG00000016098	-	92	87.000	ENSCSEG00000021457	lsm14aa	98	87.000	Cynoglossus_semilaevis
ENSGAGG00000016098	-	87	96.842	ENSDARG00000006600	lsm14aa	98	97.590	Danio_rerio
ENSGAGG00000016098	-	87	100.000	ENSHGLG00100000160	-	75	100.000	Heterocephalus_glaber_male
ENSGAGG00000016098	-	87	97.895	ENSHGLG00100017085	-	95	97.895	Heterocephalus_glaber_male
ENSGAGG00000016098	-	74	97.531	ENSHCOG00000001089	-	82	97.531	Hippocampus_comes
ENSGAGG00000016098	-	79	88.372	ENSHCOG00000009227	-	85	88.372	Hippocampus_comes
ENSGAGG00000016098	-	100	86.239	ENSLBEG00000010487	lsm14aa	91	86.239	Labrus_bergylta
ENSGAGG00000016098	-	86	94.681	ENSMZEG00005005945	-	67	94.681	Maylandia_zebra
ENSGAGG00000016098	-	73	90.000	ENSMMOG00000016341	-	91	90.000	Mola_mola
ENSGAGG00000016098	-	96	84.906	ENSNLEG00000034705	-	78	91.579	Nomascus_leucogenys
ENSGAGG00000016098	-	86	95.745	ENSORLG00000028980	-	81	93.750	Oryzias_latipes
ENSGAGG00000016098	-	93	90.099	ENSORLG00020019931	-	85	90.099	Oryzias_latipes_hni
ENSGAGG00000016098	-	92	58.491	ENSORLG00015018292	-	97	58.491	Oryzias_latipes_hsok
ENSGAGG00000016098	-	95	87.500	ENSOMEG00000016637	-	65	86.667	Oryzias_melastigma
ENSGAGG00000016098	-	87	98.947	ENSPTRG00000040949	-	100	95.918	Pan_troglodytes
ENSGAGG00000016098	-	71	96.104	ENSPMGG00000007198	-	72	96.104	Periophthalmus_magnuspinnatus
ENSGAGG00000016098	-	85	92.473	ENSPMGG00000000220	lsm14aa	89	92.473	Periophthalmus_magnuspinnatus
ENSGAGG00000016098	-	77	100.000	ENSPCOG00000016240	-	89	100.000	Propithecus_coquereli
ENSGAGG00000016098	-	83	85.714	ENSSBOG00000023312	-	89	85.714	Saimiri_boliviensis_boliviensis
ENSGAGG00000016098	-	94	93.137	ENSSBOG00000020141	-	100	93.137	Saimiri_boliviensis_boliviensis
ENSGAGG00000016098	-	84	90.217	ENSSBOG00000021178	-	64	90.217	Saimiri_boliviensis_boliviensis
ENSGAGG00000016098	-	72	92.405	ENSTRUG00000024267	-	54	92.405	Takifugu_rubripes
ENSGAGG00000016098	-	94	93.333	ENSUAMG00000017314	LSM14A	92	93.333	Ursus_americanus
ENSGAGG00000016098	-	81	75.000	ENSUMAG00000004345	-	91	75.000	Ursus_maritimus