EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000016106 (Gene tree)
Gene ID: -
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 16409 bases
Position: chrPPEB01000937.1:3405-19813
Accession: 29913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000021936	zf-C3HC	PF07967.13	1.9e-15	1	1
ENSGAGP00000021938	zf-C3HC	PF07967.13	1.9e-15	1	1
ENSGAGP00000021936	Rsm1	PF08600.10	2e-17	1	2
ENSGAGP00000021936	Rsm1	PF08600.10	2e-17	2	2
ENSGAGP00000021938	Rsm1	PF08600.10	2e-17	1	2
ENSGAGP00000021938	Rsm1	PF08600.10	2e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000024995	ZC3HC1-201	2331	-	ENSGAGP00000021936	389 (aa)	-	-
ENSGAGT00000024997	ZC3HC1-202	2173	-	ENSGAGP00000021938	389 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000016106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000016106's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000016106	ZC3HC1	99	70.000	ENSG00000091732	ZC3HC1	81	70.000	Homo_sapiens
ENSGAGG00000016106	ZC3HC1	99	44.828	ENSAPOG00000009078	zc3hc1	78	44.828	Acanthochromis_polyacanthus
ENSGAGG00000016106	ZC3HC1	100	68.798	ENSAMEG00000005425	ZC3HC1	77	68.798	Ailuropoda_melanoleuca
ENSGAGG00000016106	ZC3HC1	99	42.432	ENSACIG00000019513	zc3hc1	77	41.687	Amphilophus_citrinellus
ENSGAGG00000016106	ZC3HC1	99	45.320	ENSAOCG00000024310	zc3hc1	78	45.320	Amphiprion_ocellaris
ENSGAGG00000016106	ZC3HC1	99	45.320	ENSAPEG00000004907	zc3hc1	78	45.320	Amphiprion_percula
ENSGAGG00000016106	ZC3HC1	94	44.764	ENSATEG00000016898	zc3hc1	76	43.455	Anabas_testudineus
ENSGAGG00000016106	ZC3HC1	99	66.925	ENSAPLG00000003832	ZC3HC1	86	66.925	Anas_platyrhynchos
ENSGAGG00000016106	ZC3HC1	100	67.424	ENSACAG00000001638	ZC3HC1	78	67.424	Anolis_carolinensis
ENSGAGG00000016106	ZC3HC1	100	69.309	ENSANAG00000022213	ZC3HC1	98	65.049	Aotus_nancymaae
ENSGAGG00000016106	ZC3HC1	99	44.361	ENSACLG00000025033	zc3hc1	84	43.142	Astatotilapia_calliptera
ENSGAGG00000016106	ZC3HC1	98	40.513	ENSAMXG00000036792	zc3hc1	78	40.513	Astyanax_mexicanus
ENSGAGG00000016106	ZC3HC1	100	69.054	ENSBTAG00000011247	ZC3HC1	77	69.054	Bos_taurus
ENSGAGG00000016106	ZC3HC1	100	69.565	ENSCJAG00000010536	ZC3HC1	98	64.563	Callithrix_jacchus
ENSGAGG00000016106	ZC3HC1	100	70.588	ENSCAFG00000029401	-	76	70.588	Canis_familiaris
ENSGAGG00000016106	ZC3HC1	100	70.588	ENSCAFG00000028735	-	77	70.588	Canis_familiaris
ENSGAGG00000016106	ZC3HC1	100	70.844	ENSCAFG00000031850	-	77	70.844	Canis_familiaris
ENSGAGG00000016106	ZC3HC1	100	70.332	ENSCAFG00000001499	-	76	70.332	Canis_familiaris
ENSGAGG00000016106	ZC3HC1	100	70.588	ENSCAFG00020006829	-	77	70.588	Canis_lupus_dingo
ENSGAGG00000016106	ZC3HC1	100	70.332	ENSCAFG00020023333	-	77	70.332	Canis_lupus_dingo
ENSGAGG00000016106	ZC3HC1	100	63.171	ENSCHIG00000014103	ZC3HC1	79	63.171	Capra_hircus
ENSGAGG00000016106	ZC3HC1	100	68.031	ENSTSYG00000002843	ZC3HC1	77	68.031	Carlito_syrichta
ENSGAGG00000016106	ZC3HC1	100	47.970	ENSCAPG00000016300	ZC3HC1	85	46.954	Cavia_aperea
ENSGAGG00000016106	ZC3HC1	100	65.217	ENSCPOG00000014034	ZC3HC1	78	64.450	Cavia_porcellus
ENSGAGG00000016106	ZC3HC1	96	58.667	ENSCCAG00000020384	ZC3HC1	100	66.228	Cebus_capucinus
ENSGAGG00000016106	ZC3HC1	100	69.309	ENSCATG00000023130	ZC3HC1	97	67.935	Cercocebus_atys
ENSGAGG00000016106	ZC3HC1	100	50.384	ENSCLAG00000008260	ZC3HC1	82	49.745	Chinchilla_lanigera
ENSGAGG00000016106	ZC3HC1	94	67.935	ENSCSAG00000009881	ZC3HC1	97	67.935	Chlorocebus_sabaeus
ENSGAGG00000016106	ZC3HC1	99	68.895	ENSCHOG00000011846	ZC3HC1	86	68.895	Choloepus_hoffmanni
ENSGAGG00000016106	ZC3HC1	100	95.630	ENSCPBG00000017519	ZC3HC1	78	95.630	Chrysemys_picta_bellii
ENSGAGG00000016106	ZC3HC1	100	69.054	ENSCANG00000029091	ZC3HC1	98	63.592	Colobus_angolensis_palliatus
ENSGAGG00000016106	ZC3HC1	100	67.519	ENSCGRG00001018805	Zc3hc1	77	67.519	Cricetulus_griseus_chok1gshd
ENSGAGG00000016106	ZC3HC1	100	67.519	ENSCGRG00000017114	Zc3hc1	78	67.519	Cricetulus_griseus_crigri
ENSGAGG00000016106	ZC3HC1	99	44.963	ENSCSEG00000009284	zc3hc1	76	43.489	Cynoglossus_semilaevis
ENSGAGG00000016106	ZC3HC1	99	43.500	ENSCVAG00000011566	zc3hc1	78	42.079	Cyprinodon_variegatus
ENSGAGG00000016106	ZC3HC1	99	46.734	ENSDARG00000062651	zc3hc1	77	46.734	Danio_rerio
ENSGAGG00000016106	ZC3HC1	100	68.286	ENSDNOG00000045016	ZC3HC1	77	68.286	Dasypus_novemcinctus
ENSGAGG00000016106	ZC3HC1	100	67.519	ENSDORG00000008697	Zc3hc1	84	67.519	Dipodomys_ordii
ENSGAGG00000016106	ZC3HC1	100	69.821	ENSEASG00005008789	ZC3HC1	83	69.821	Equus_asinus_asinus
ENSGAGG00000016106	ZC3HC1	100	70.077	ENSECAG00000017886	ZC3HC1	77	70.077	Equus_caballus
ENSGAGG00000016106	ZC3HC1	78	67.586	ENSEEUG00000003123	ZC3HC1	61	67.586	Erinaceus_europaeus
ENSGAGG00000016106	ZC3HC1	99	45.679	ENSELUG00000023168	zc3hc1	78	48.284	Esox_lucius
ENSGAGG00000016106	ZC3HC1	100	69.565	ENSFCAG00000010429	ZC3HC1	82	69.565	Felis_catus
ENSGAGG00000016106	ZC3HC1	100	66.416	ENSFALG00000005006	ZC3HC1	85	65.664	Ficedula_albicollis
ENSGAGG00000016106	ZC3HC1	100	68.286	ENSFDAG00000019897	ZC3HC1	78	68.286	Fukomys_damarensis
ENSGAGG00000016106	ZC3HC1	100	44.226	ENSFHEG00000020149	zc3hc1	78	43.103	Fundulus_heteroclitus
ENSGAGG00000016106	ZC3HC1	99	43.719	ENSGMOG00000002914	zc3hc1	79	42.857	Gadus_morhua
ENSGAGG00000016106	ZC3HC1	99	70.361	ENSGALG00000008003	ZC3HC1	78	70.361	Gallus_gallus
ENSGAGG00000016106	ZC3HC1	100	43.735	ENSGAFG00000016095	zc3hc1	78	42.506	Gambusia_affinis
ENSGAGG00000016106	ZC3HC1	99	45.320	ENSGACG00000019706	zc3hc1	78	44.118	Gasterosteus_aculeatus
ENSGAGG00000016106	ZC3HC1	99	70.256	ENSGGOG00000015504	ZC3HC1	97	63.902	Gorilla_gorilla
ENSGAGG00000016106	ZC3HC1	99	44.361	ENSHBUG00000008347	zc3hc1	77	43.142	Haplochromis_burtoni
ENSGAGG00000016106	ZC3HC1	100	68.542	ENSHGLG00000005085	ZC3HC1	78	68.542	Heterocephalus_glaber_female
ENSGAGG00000016106	ZC3HC1	100	68.286	ENSHGLG00100011395	ZC3HC1	78	68.286	Heterocephalus_glaber_male
ENSGAGG00000016106	ZC3HC1	99	43.797	ENSHCOG00000014309	zc3hc1	77	45.408	Hippocampus_comes
ENSGAGG00000016106	ZC3HC1	100	68.542	ENSSTOG00000023599	-	77	68.542	Ictidomys_tridecemlineatus
ENSGAGG00000016106	ZC3HC1	99	44.665	ENSKMAG00000015315	zc3hc1	73	42.928	Kryptolebias_marmoratus
ENSGAGG00000016106	ZC3HC1	99	44.499	ENSLBEG00000017325	zc3hc1	82	43.276	Labrus_bergylta
ENSGAGG00000016106	ZC3HC1	75	59.197	ENSLACG00000013032	ZC3HC1	71	59.197	Latimeria_chalumnae
ENSGAGG00000016106	ZC3HC1	99	51.880	ENSLOCG00000015963	zc3hc1	79	51.880	Lepisosteus_oculatus
ENSGAGG00000016106	ZC3HC1	100	68.702	ENSLAFG00000001292	ZC3HC1	77	68.702	Loxodonta_africana
ENSGAGG00000016106	ZC3HC1	100	69.309	ENSMFAG00000030176	ZC3HC1	98	67.480	Macaca_fascicularis
ENSGAGG00000016106	ZC3HC1	100	69.821	ENSMMUG00000006155	ZC3HC1	99	68.579	Macaca_mulatta
ENSGAGG00000016106	ZC3HC1	100	69.565	ENSMNEG00000011833	ZC3HC1	98	67.751	Macaca_nemestrina
ENSGAGG00000016106	ZC3HC1	100	69.565	ENSMLEG00000027328	ZC3HC1	98	68.478	Mandrillus_leucophaeus
ENSGAGG00000016106	ZC3HC1	99	46.020	ENSMAMG00000010691	zc3hc1	77	44.527	Mastacembelus_armatus
ENSGAGG00000016106	ZC3HC1	99	44.361	ENSMZEG00005007142	zc3hc1	77	43.142	Maylandia_zebra
ENSGAGG00000016106	ZC3HC1	99	68.205	ENSMGAG00000002977	ZC3HC1	77	68.638	Meleagris_gallopavo
ENSGAGG00000016106	ZC3HC1	100	62.155	ENSMAUG00000017032	Zc3hc1	87	62.155	Mesocricetus_auratus
ENSGAGG00000016106	ZC3HC1	100	69.309	ENSMICG00000009167	ZC3HC1	77	69.309	Microcebus_murinus
ENSGAGG00000016106	ZC3HC1	100	67.766	ENSMOCG00000015239	Zc3hc1	77	67.766	Microtus_ochrogaster
ENSGAGG00000016106	ZC3HC1	100	42.092	ENSMMOG00000002204	zc3hc1	89	41.849	Mola_mola
ENSGAGG00000016106	ZC3HC1	99	62.010	ENSMODG00000014630	ZC3HC1	85	59.902	Monodelphis_domestica
ENSGAGG00000016106	ZC3HC1	98	43.970	ENSMALG00000014447	zc3hc1	78	42.537	Monopterus_albus
ENSGAGG00000016106	ZC3HC1	100	67.008	MGP_CAROLIEiJ_G0028183	Zc3hc1	77	65.473	Mus_caroli
ENSGAGG00000016106	ZC3HC1	100	66.244	ENSMUSG00000039130	Zc3hc1	77	66.244	Mus_musculus
ENSGAGG00000016106	ZC3HC1	100	59.645	MGP_PahariEiJ_G0021941	Zc3hc1	76	59.645	Mus_pahari
ENSGAGG00000016106	ZC3HC1	100	66.244	MGP_SPRETEiJ_G0029183	Zc3hc1	77	66.244	Mus_spretus
ENSGAGG00000016106	ZC3HC1	94	68.392	ENSMPUG00000005297	ZC3HC1	74	67.021	Mustela_putorius_furo
ENSGAGG00000016106	ZC3HC1	86	60.350	ENSMLUG00000029228	-	99	60.350	Myotis_lucifugus
ENSGAGG00000016106	ZC3HC1	100	67.857	ENSMLUG00000000063	-	77	67.857	Myotis_lucifugus
ENSGAGG00000016106	ZC3HC1	100	68.020	ENSNGAG00000019014	Zc3hc1	77	68.020	Nannospalax_galili
ENSGAGG00000016106	ZC3HC1	99	44.221	ENSNBRG00000004577	zc3hc1	77	42.750	Neolamprologus_brichardi
ENSGAGG00000016106	ZC3HC1	99	69.487	ENSNLEG00000012698	ZC3HC1	97	68.219	Nomascus_leucogenys
ENSGAGG00000016106	ZC3HC1	100	70.844	ENSMEUG00000011023	ZC3HC1	77	70.844	Notamacropus_eugenii
ENSGAGG00000016106	ZC3HC1	100	65.217	ENSODEG00000014604	ZC3HC1	78	64.962	Octodon_degus
ENSGAGG00000016106	ZC3HC1	99	44.612	ENSONIG00000011644	zc3hc1	77	43.142	Oreochromis_niloticus
ENSGAGG00000016106	ZC3HC1	100	61.404	ENSOANG00000011460	ZC3HC1	86	61.404	Ornithorhynchus_anatinus
ENSGAGG00000016106	ZC3HC1	100	66.240	ENSOCUG00000017137	ZC3HC1	77	66.240	Oryctolagus_cuniculus
ENSGAGG00000016106	ZC3HC1	99	43.719	ENSORLG00000014409	zc3hc1	76	43.719	Oryzias_latipes
ENSGAGG00000016106	ZC3HC1	99	43.719	ENSORLG00020015874	zc3hc1	76	43.719	Oryzias_latipes_hni
ENSGAGG00000016106	ZC3HC1	99	43.467	ENSORLG00015014641	zc3hc1	76	43.467	Oryzias_latipes_hsok
ENSGAGG00000016106	ZC3HC1	99	44.330	ENSOMEG00000020604	zc3hc1	78	44.030	Oryzias_melastigma
ENSGAGG00000016106	ZC3HC1	99	44.730	ENSOMEG00000000215	zc3hc1	78	44.776	Oryzias_melastigma
ENSGAGG00000016106	ZC3HC1	99	66.923	ENSOGAG00000026193	ZC3HC1	78	66.923	Otolemur_garnettii
ENSGAGG00000016106	ZC3HC1	100	69.309	ENSOARG00000004907	ZC3HC1	76	69.309	Ovis_aries
ENSGAGG00000016106	ZC3HC1	99	70.000	ENSPPAG00000043172	ZC3HC1	97	63.902	Pan_paniscus
ENSGAGG00000016106	ZC3HC1	100	69.054	ENSPPRG00000001004	ZC3HC1	82	69.054	Panthera_pardus
ENSGAGG00000016106	ZC3HC1	100	69.565	ENSPTIG00000007823	ZC3HC1	82	69.565	Panthera_tigris_altaica
ENSGAGG00000016106	ZC3HC1	99	70.000	ENSPTRG00000019685	ZC3HC1	97	63.902	Pan_troglodytes
ENSGAGG00000016106	ZC3HC1	100	69.565	ENSPANG00000014229	ZC3HC1	98	64.078	Papio_anubis
ENSGAGG00000016106	ZC3HC1	99	48.615	ENSPKIG00000007172	zc3hc1	77	47.355	Paramormyrops_kingsleyae
ENSGAGG00000016106	ZC3HC1	100	78.788	ENSPSIG00000016646	ZC3HC1	78	80.051	Pelodiscus_sinensis
ENSGAGG00000016106	ZC3HC1	97	46.484	ENSPMGG00000003548	zc3hc1	80	38.168	Periophthalmus_magnuspinnatus
ENSGAGG00000016106	ZC3HC1	100	67.519	ENSPEMG00000000514	Zc3hc1	77	67.519	Peromyscus_maniculatus_bairdii
ENSGAGG00000016106	ZC3HC1	100	71.100	ENSPCIG00000020619	ZC3HC1	100	71.100	Phascolarctos_cinereus
ENSGAGG00000016106	ZC3HC1	100	43.489	ENSPFOG00000003466	zc3hc1	79	42.506	Poecilia_formosa
ENSGAGG00000016106	ZC3HC1	100	43.210	ENSPLAG00000022211	zc3hc1	78	42.222	Poecilia_latipinna
ENSGAGG00000016106	ZC3HC1	100	43.489	ENSPMEG00000001458	zc3hc1	84	42.506	Poecilia_mexicana
ENSGAGG00000016106	ZC3HC1	100	43.980	ENSPREG00000004004	zc3hc1	78	42.752	Poecilia_reticulata
ENSGAGG00000016106	ZC3HC1	99	63.520	ENSPPYG00000017998	ZC3HC1	78	63.520	Pongo_abelii
ENSGAGG00000016106	ZC3HC1	100	65.473	ENSPCAG00000001182	ZC3HC1	84	65.473	Procavia_capensis
ENSGAGG00000016106	ZC3HC1	100	69.309	ENSPCOG00000017354	ZC3HC1	77	69.309	Propithecus_coquereli
ENSGAGG00000016106	ZC3HC1	100	63.939	ENSPVAG00000003195	ZC3HC1	77	63.939	Pteropus_vampyrus
ENSGAGG00000016106	ZC3HC1	99	44.361	ENSPNYG00000020692	zc3hc1	77	43.142	Pundamilia_nyererei
ENSGAGG00000016106	ZC3HC1	98	43.142	ENSPNAG00000020746	zc3hc1	78	41.960	Pygocentrus_nattereri
ENSGAGG00000016106	ZC3HC1	100	65.482	ENSRNOG00000010154	Zc3hc1	77	65.482	Rattus_norvegicus
ENSGAGG00000016106	ZC3HC1	100	69.054	ENSRBIG00000029409	ZC3HC1	98	67.760	Rhinopithecus_bieti
ENSGAGG00000016106	ZC3HC1	100	69.054	ENSRROG00000041831	ZC3HC1	99	66.933	Rhinopithecus_roxellana
ENSGAGG00000016106	ZC3HC1	100	58.312	ENSSBOG00000032787	ZC3HC1	98	64.563	Saimiri_boliviensis_boliviensis
ENSGAGG00000016106	ZC3HC1	100	70.844	ENSSHAG00000002529	ZC3HC1	84	70.844	Sarcophilus_harrisii
ENSGAGG00000016106	ZC3HC1	99	52.672	ENSSFOG00015003667	zc3hc1	74	52.417	Scleropages_formosus
ENSGAGG00000016106	ZC3HC1	99	44.743	ENSSMAG00000000647	zc3hc1	70	43.765	Scophthalmus_maximus
ENSGAGG00000016106	ZC3HC1	99	44.500	ENSSDUG00000004241	zc3hc1	76	43.000	Seriola_dumerili
ENSGAGG00000016106	ZC3HC1	99	44.500	ENSSLDG00000025056	zc3hc1	76	43.000	Seriola_lalandi_dorsalis
ENSGAGG00000016106	ZC3HC1	100	60.859	ENSSARG00000012013	ZC3HC1	77	60.859	Sorex_araneus
ENSGAGG00000016106	ZC3HC1	96	65.789	ENSSPUG00000000778	ZC3HC1	74	65.789	Sphenodon_punctatus
ENSGAGG00000016106	ZC3HC1	99	44.554	ENSSPAG00000020041	zc3hc1	78	44.554	Stegastes_partitus
ENSGAGG00000016106	ZC3HC1	100	68.798	ENSSSCG00000016565	ZC3HC1	100	68.798	Sus_scrofa
ENSGAGG00000016106	ZC3HC1	62	63.934	ENSTGUG00000016262	ZC3HC1	99	63.934	Taeniopygia_guttata
ENSGAGG00000016106	ZC3HC1	100	44.949	ENSTRUG00000020077	zc3hc1	78	44.949	Takifugu_rubripes
ENSGAGG00000016106	ZC3HC1	100	45.088	ENSTNIG00000007585	zc3hc1	81	43.367	Tetraodon_nigroviridis
ENSGAGG00000016106	ZC3HC1	94	66.757	ENSTBEG00000005216	ZC3HC1	73	66.757	Tupaia_belangeri
ENSGAGG00000016106	ZC3HC1	100	68.286	ENSTTRG00000008458	ZC3HC1	81	68.286	Tursiops_truncatus
ENSGAGG00000016106	ZC3HC1	100	69.309	ENSUAMG00000020249	ZC3HC1	77	69.309	Ursus_americanus
ENSGAGG00000016106	ZC3HC1	100	68.798	ENSUMAG00000009268	ZC3HC1	77	68.798	Ursus_maritimus
ENSGAGG00000016106	ZC3HC1	71	62.500	ENSVPAG00000010846	ZC3HC1	54	62.500	Vicugna_pacos
ENSGAGG00000016106	ZC3HC1	94	69.755	ENSVVUG00000012386	ZC3HC1	76	69.755	Vulpes_vulpes
ENSGAGG00000016106	ZC3HC1	93	54.496	ENSXETG00000033900	zc3hc1	74	54.496	Xenopus_tropicalis
ENSGAGG00000016106	ZC3HC1	100	43.735	ENSXCOG00000013570	zc3hc1	78	42.015	Xiphophorus_couchianus
ENSGAGG00000016106	ZC3HC1	100	44.226	ENSXMAG00000010979	zc3hc1	84	42.506	Xiphophorus_maculatus