EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000016342 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 7751 bases
Position: chrPPEB01010185.1:6265-14015
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000022248	zf-U11-48K	PF05253.12	2.8e-23	1	2
ENSGAGP00000022248	zf-U11-48K	PF05253.12	2.8e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000025358	-	517	-	ENSGAGP00000022248	107 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000016342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000016342's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000016342	-	79	81.176	ENSGAGG00000018216	-	74	81.176
ENSGAGG00000016342	-	98	52.336	ENSGAGG00000011062	GTSF1	54	52.336
ENSGAGG00000016342	-	69	95.946	ENSGAGG00000024765	-	69	95.946

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000016342	-	99	51.887	ENSG00000170627	GTSF1	62	51.887	Homo_sapiens
ENSGAGG00000016342	-	94	49.505	ENSAPOG00000022724	-	66	49.505	Acanthochromis_polyacanthus
ENSGAGG00000016342	-	99	51.887	ENSAMEG00000000939	GTSF1	62	51.887	Ailuropoda_melanoleuca
ENSGAGG00000016342	-	98	53.271	ENSAPLG00000004814	GTSF1	78	53.271	Anas_platyrhynchos
ENSGAGG00000016342	-	95	56.863	ENSACAG00000029590	-	81	56.863	Anolis_carolinensis
ENSGAGG00000016342	-	95	50.000	ENSACAG00000014260	-	59	50.000	Anolis_carolinensis
ENSGAGG00000016342	-	99	51.887	ENSANAG00000024529	GTSF1	62	51.887	Aotus_nancymaae
ENSGAGG00000016342	-	99	50.000	ENSBTAG00000018085	GTSF1	62	50.000	Bos_taurus
ENSGAGG00000016342	-	95	52.941	ENSCJAG00000018968	-	60	52.941	Callithrix_jacchus
ENSGAGG00000016342	-	95	51.961	ENSCJAG00000039915	-	52	51.961	Callithrix_jacchus
ENSGAGG00000016342	-	99	51.887	ENSCAFG00000006465	-	62	51.887	Canis_familiaris
ENSGAGG00000016342	-	99	51.887	ENSCAFG00020020373	-	60	51.887	Canis_lupus_dingo
ENSGAGG00000016342	-	99	50.943	ENSCHIG00000012215	-	61	50.943	Capra_hircus
ENSGAGG00000016342	-	99	37.736	ENSTSYG00000035266	-	59	37.736	Carlito_syrichta
ENSGAGG00000016342	-	99	51.887	ENSTSYG00000004679	-	63	51.887	Carlito_syrichta
ENSGAGG00000016342	-	99	51.887	ENSCPOG00000008743	GTSF1	62	51.887	Cavia_porcellus
ENSGAGG00000016342	-	99	51.887	ENSCATG00000036328	GTSF1	62	51.887	Cercocebus_atys
ENSGAGG00000016342	-	99	51.887	ENSCLAG00000012811	GTSF1	62	51.887	Chinchilla_lanigera
ENSGAGG00000016342	-	99	51.887	ENSCSAG00000005394	GTSF1	66	51.887	Chlorocebus_sabaeus
ENSGAGG00000016342	-	99	51.887	ENSCHOG00000001659	GTSF1	63	51.887	Choloepus_hoffmanni
ENSGAGG00000016342	-	98	62.963	ENSCPBG00000024905	-	63	62.963	Chrysemys_picta_bellii
ENSGAGG00000016342	-	99	51.887	ENSCANG00000033118	GTSF1	62	51.887	Colobus_angolensis_palliatus
ENSGAGG00000016342	-	99	46.296	ENSCANG00000031776	-	61	46.296	Colobus_angolensis_palliatus
ENSGAGG00000016342	-	99	51.887	ENSCGRG00001013814	Gtsf1	62	51.887	Cricetulus_griseus_chok1gshd
ENSGAGG00000016342	-	99	51.887	ENSCGRG00000007733	Gtsf1	62	51.887	Cricetulus_griseus_crigri
ENSGAGG00000016342	-	99	51.887	ENSDNOG00000001438	-	68	51.887	Dasypus_novemcinctus
ENSGAGG00000016342	-	99	51.887	ENSDORG00000003228	Gtsf1	62	51.887	Dipodomys_ordii
ENSGAGG00000016342	-	99	50.943	ENSETEG00000009310	GTSF1	63	50.943	Echinops_telfairi
ENSGAGG00000016342	-	99	52.830	ENSEASG00005010260	GTSF1	56	52.830	Equus_asinus_asinus
ENSGAGG00000016342	-	99	52.830	ENSECAG00000013618	GTSF1	62	52.830	Equus_caballus
ENSGAGG00000016342	-	99	51.887	ENSEEUG00000005185	GTSF1	62	51.887	Erinaceus_europaeus
ENSGAGG00000016342	-	99	51.887	ENSFCAG00000010156	-	62	51.887	Felis_catus
ENSGAGG00000016342	-	96	52.427	ENSFALG00000007613	-	81	52.427	Ficedula_albicollis
ENSGAGG00000016342	-	99	52.830	ENSFDAG00000009383	GTSF1	62	52.830	Fukomys_damarensis
ENSGAGG00000016342	-	95	53.922	ENSGALG00000001109	GTSF1	64	53.922	Gallus_gallus
ENSGAGG00000016342	-	94	47.525	ENSGACG00000010783	-	56	47.525	Gasterosteus_aculeatus
ENSGAGG00000016342	-	99	51.887	ENSGGOG00000016063	GTSF1	62	51.887	Gorilla_gorilla
ENSGAGG00000016342	-	99	51.887	ENSHGLG00000002436	GTSF1	62	51.887	Heterocephalus_glaber_female
ENSGAGG00000016342	-	99	51.887	ENSHGLG00100017301	GTSF1	62	51.887	Heterocephalus_glaber_male
ENSGAGG00000016342	-	98	44.762	ENSIPUG00000002483	-	56	44.762	Ictalurus_punctatus
ENSGAGG00000016342	-	99	51.887	ENSSTOG00000025170	GTSF1	62	51.887	Ictidomys_tridecemlineatus
ENSGAGG00000016342	-	99	51.887	ENSJJAG00000003323	-	64	51.887	Jaculus_jaculus
ENSGAGG00000016342	-	99	49.057	ENSJJAG00000017442	-	65	49.057	Jaculus_jaculus
ENSGAGG00000016342	-	94	48.515	ENSKMAG00000006038	-	55	48.515	Kryptolebias_marmoratus
ENSGAGG00000016342	-	94	51.485	ENSLACG00000008870	GTSF1	51	51.485	Latimeria_chalumnae
ENSGAGG00000016342	-	99	51.887	ENSLAFG00000016318	GTSF1	62	51.887	Loxodonta_africana
ENSGAGG00000016342	-	99	51.887	ENSMFAG00000041178	GTSF1	62	51.887	Macaca_fascicularis
ENSGAGG00000016342	-	99	51.887	ENSMMUG00000003758	GTSF1	62	51.887	Macaca_mulatta
ENSGAGG00000016342	-	99	51.887	ENSMNEG00000036779	GTSF1	62	51.887	Macaca_nemestrina
ENSGAGG00000016342	-	99	51.887	ENSMLEG00000028375	GTSF1	62	51.887	Mandrillus_leucophaeus
ENSGAGG00000016342	-	97	53.846	ENSMGAG00000000685	GTSF1	74	53.846	Meleagris_gallopavo
ENSGAGG00000016342	-	99	35.849	ENSMAUG00000018746	Gtsf1	56	35.849	Mesocricetus_auratus
ENSGAGG00000016342	-	99	51.887	ENSMICG00000008444	-	62	51.887	Microcebus_murinus
ENSGAGG00000016342	-	99	51.887	ENSMOCG00000018889	Gtsf1	63	51.887	Microtus_ochrogaster
ENSGAGG00000016342	-	99	53.774	ENSMODG00000019422	GTSF1	62	53.774	Monodelphis_domestica
ENSGAGG00000016342	-	99	51.887	MGP_CAROLIEiJ_G0020379	Gtsf1	82	51.887	Mus_caroli
ENSGAGG00000016342	-	99	51.887	ENSMUSG00000022487	Gtsf1	82	51.887	Mus_musculus
ENSGAGG00000016342	-	99	51.887	MGP_PahariEiJ_G0020378	Gtsf1	82	51.887	Mus_pahari
ENSGAGG00000016342	-	99	51.887	MGP_SPRETEiJ_G0021272	Gtsf1	82	51.887	Mus_spretus
ENSGAGG00000016342	-	99	51.887	ENSMPUG00000005669	-	62	51.887	Mustela_putorius_furo
ENSGAGG00000016342	-	99	50.000	ENSMPUG00000019140	-	63	50.000	Mustela_putorius_furo
ENSGAGG00000016342	-	99	50.943	ENSMPUG00000019323	-	62	50.943	Mustela_putorius_furo
ENSGAGG00000016342	-	99	50.943	ENSMLUG00000026557	-	62	50.943	Myotis_lucifugus
ENSGAGG00000016342	-	99	51.887	ENSMLUG00000012961	-	62	51.887	Myotis_lucifugus
ENSGAGG00000016342	-	99	51.887	ENSNGAG00000014213	Gtsf1	62	51.887	Nannospalax_galili
ENSGAGG00000016342	-	99	51.887	ENSNLEG00000017635	GTSF1	62	51.887	Nomascus_leucogenys
ENSGAGG00000016342	-	87	47.312	ENSMEUG00000016206	GTSF1	54	47.312	Notamacropus_eugenii
ENSGAGG00000016342	-	99	51.887	ENSODEG00000014220	GTSF1	62	51.887	Octodon_degus
ENSGAGG00000016342	-	100	50.000	ENSOANG00000011386	GTSF1	64	50.000	Ornithorhynchus_anatinus
ENSGAGG00000016342	-	99	50.943	ENSOCUG00000024495	GTSF1	62	50.943	Oryctolagus_cuniculus
ENSGAGG00000016342	-	97	43.925	ENSORLG00015005017	-	62	44.231	Oryzias_latipes_hsok
ENSGAGG00000016342	-	99	50.943	ENSOGAG00000017227	GTSF1	61	50.943	Otolemur_garnettii
ENSGAGG00000016342	-	99	50.943	ENSOARG00000016162	GTSF1	62	50.943	Ovis_aries
ENSGAGG00000016342	-	99	51.887	ENSPPAG00000028506	GTSF1	62	51.887	Pan_paniscus
ENSGAGG00000016342	-	99	51.887	ENSPPRG00000004344	-	62	51.887	Panthera_pardus
ENSGAGG00000016342	-	99	48.113	ENSPPRG00000017612	-	54	48.113	Panthera_pardus
ENSGAGG00000016342	-	99	49.057	ENSPTIG00000010868	-	54	49.057	Panthera_tigris_altaica
ENSGAGG00000016342	-	99	51.887	ENSPTIG00000020415	-	62	51.887	Panthera_tigris_altaica
ENSGAGG00000016342	-	99	51.887	ENSPTRG00000005041	GTSF1	62	51.887	Pan_troglodytes
ENSGAGG00000016342	-	99	51.887	ENSPANG00000020579	GTSF1	62	51.887	Papio_anubis
ENSGAGG00000016342	-	95	52.885	ENSPSIG00000009968	GTSF1	50	52.885	Pelodiscus_sinensis
ENSGAGG00000016342	-	95	88.235	ENSPSIG00000009839	-	64	88.350	Pelodiscus_sinensis
ENSGAGG00000016342	-	99	51.887	ENSPEMG00000009595	Gtsf1	62	51.887	Peromyscus_maniculatus_bairdii
ENSGAGG00000016342	-	95	53.922	ENSPCIG00000006731	GTSF1	60	53.922	Phascolarctos_cinereus
ENSGAGG00000016342	-	99	51.887	ENSPPYG00000004605	GTSF1	62	51.887	Pongo_abelii
ENSGAGG00000016342	-	99	44.340	ENSPCOG00000015201	-	62	43.689	Propithecus_coquereli
ENSGAGG00000016342	-	99	51.887	ENSPCOG00000016907	-	62	51.887	Propithecus_coquereli
ENSGAGG00000016342	-	99	51.887	ENSPVAG00000000333	GTSF1	62	51.887	Pteropus_vampyrus
ENSGAGG00000016342	-	97	43.810	ENSPNAG00000005737	-	56	43.810	Pygocentrus_nattereri
ENSGAGG00000016342	-	99	51.887	ENSRNOG00000036831	Gtsf1	55	51.887	Rattus_norvegicus
ENSGAGG00000016342	-	99	48.113	ENSRBIG00000039916	-	53	48.113	Rhinopithecus_bieti
ENSGAGG00000016342	-	99	52.830	ENSRBIG00000043438	-	62	52.830	Rhinopithecus_bieti
ENSGAGG00000016342	-	99	51.887	ENSRROG00000008137	GTSF1	62	51.887	Rhinopithecus_roxellana
ENSGAGG00000016342	-	99	51.887	ENSSBOG00000029460	GTSF1	62	51.887	Saimiri_boliviensis_boliviensis
ENSGAGG00000016342	-	99	53.774	ENSSHAG00000011633	GTSF1	62	53.774	Sarcophilus_harrisii
ENSGAGG00000016342	-	99	50.943	ENSSARG00000004928	GTSF1	62	50.943	Sorex_araneus
ENSGAGG00000016342	-	98	53.271	ENSSPUG00000010064	GTSF1	88	53.271	Sphenodon_punctatus
ENSGAGG00000016342	-	99	52.830	ENSSSCG00000026333	GTSF1	62	52.830	Sus_scrofa
ENSGAGG00000016342	-	96	53.398	ENSTGUG00000002008	-	80	53.398	Taeniopygia_guttata
ENSGAGG00000016342	-	99	50.943	ENSTBEG00000006154	GTSF1	65	50.943	Tupaia_belangeri
ENSGAGG00000016342	-	99	50.943	ENSTTRG00000004470	GTSF1	62	50.943	Tursiops_truncatus
ENSGAGG00000016342	-	99	51.887	ENSUAMG00000021669	GTSF1	60	51.887	Ursus_americanus
ENSGAGG00000016342	-	99	51.887	ENSUMAG00000011279	GTSF1	62	51.887	Ursus_maritimus
ENSGAGG00000016342	-	99	51.887	ENSVPAG00000007016	GTSF1	63	51.887	Vicugna_pacos
ENSGAGG00000016342	-	98	53.333	ENSVVUG00000023687	-	53	51.887	Vulpes_vulpes