EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000016432 (Gene tree)
Gene ID: -
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 11144 bases
Position: chrPPEB01007925.1:16237-27380
Accession: 25980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000022394	TRM	PF02005.16	9.9e-143	1	1
ENSGAGP00000022391	TRM	PF02005.16	1.2e-142	1	1
ENSGAGP00000022394	Met_10	PF02475.16	1.4e-06	1	1
ENSGAGP00000022391	Met_10	PF02475.16	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000025517	TRMT1-202	3381	-	ENSGAGP00000022394	625 (aa)	-	-
ENSGAGT00000025514	TRMT1-201	3501	-	ENSGAGP00000022391	665 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000016432's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000016432's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000016432	TRMT1	86	69.847	ENSG00000104907	TRMT1	99	78.421	Homo_sapiens
ENSGAGG00000016432	TRMT1	88	68.309	ENSAMEG00000012598	TRMT1	90	68.309	Ailuropoda_melanoleuca
ENSGAGG00000016432	TRMT1	84	62.989	ENSACIG00000018680	trmt1	87	62.989	Amphilophus_citrinellus
ENSGAGG00000016432	TRMT1	85	70.423	ENSAOCG00000006781	trmt1	85	70.423	Amphiprion_ocellaris
ENSGAGG00000016432	TRMT1	85	70.423	ENSAPEG00000007712	trmt1	85	70.423	Amphiprion_percula
ENSGAGG00000016432	TRMT1	88	70.458	ENSATEG00000001872	trmt1	88	70.458	Anabas_testudineus
ENSGAGG00000016432	TRMT1	87	74.957	ENSACAG00000003825	TRMT1	95	74.957	Anolis_carolinensis
ENSGAGG00000016432	TRMT1	85	68.696	ENSANAG00000023016	TRMT1	92	68.696	Aotus_nancymaae
ENSGAGG00000016432	TRMT1	84	68.683	ENSACLG00000010073	trmt1	92	68.683	Astatotilapia_calliptera
ENSGAGG00000016432	TRMT1	86	68.041	ENSAMXG00000012026	trmt1	87	68.041	Astyanax_mexicanus
ENSGAGG00000016432	TRMT1	93	66.563	ENSBTAG00000019325	TRMT1	89	66.563	Bos_taurus
ENSGAGG00000016432	TRMT1	76	42.916	WBGene00006613	trm-1	93	42.857	Caenorhabditis_elegans
ENSGAGG00000016432	TRMT1	86	67.682	ENSCJAG00000004566	TRMT1	90	67.682	Callithrix_jacchus
ENSGAGG00000016432	TRMT1	87	69.799	ENSCAFG00000017070	TRMT1	93	69.799	Canis_familiaris
ENSGAGG00000016432	TRMT1	87	69.631	ENSCAFG00020005397	TRMT1	91	69.529	Canis_lupus_dingo
ENSGAGG00000016432	TRMT1	93	66.977	ENSCHIG00000013569	TRMT1	94	66.977	Capra_hircus
ENSGAGG00000016432	TRMT1	87	65.825	ENSTSYG00000003207	TRMT1	90	65.825	Carlito_syrichta
ENSGAGG00000016432	TRMT1	72	72.199	ENSCAPG00000003355	TRMT1	88	72.199	Cavia_aperea
ENSGAGG00000016432	TRMT1	89	67.940	ENSCPOG00000011754	TRMT1	89	67.940	Cavia_porcellus
ENSGAGG00000016432	TRMT1	87	66.214	ENSCCAG00000022263	TRMT1	93	67.478	Cebus_capucinus
ENSGAGG00000016432	TRMT1	93	66.091	ENSCATG00000039850	TRMT1	94	66.091	Cercocebus_atys
ENSGAGG00000016432	TRMT1	85	52.583	ENSCATG00000038220	-	92	52.583	Cercocebus_atys
ENSGAGG00000016432	TRMT1	92	66.035	ENSCLAG00000015295	TRMT1	94	64.038	Chinchilla_lanigera
ENSGAGG00000016432	TRMT1	83	69.318	ENSCSAG00000006500	TRMT1	97	69.318	Chlorocebus_sabaeus
ENSGAGG00000016432	TRMT1	100	92.643	ENSCPBG00000023866	TRMT1	100	93.243	Chrysemys_picta_bellii
ENSGAGG00000016432	TRMT1	81	48.987	ENSCING00000002884	-	97	48.987	Ciona_intestinalis
ENSGAGG00000016432	TRMT1	80	48.980	ENSCSAVG00000010927	-	100	48.080	Ciona_savignyi
ENSGAGG00000016432	TRMT1	93	52.119	ENSCANG00000040631	TRMT1	95	52.119	Colobus_angolensis_palliatus
ENSGAGG00000016432	TRMT1	86	51.771	ENSCANG00000031650	-	90	51.771	Colobus_angolensis_palliatus
ENSGAGG00000016432	TRMT1	89	66.777	ENSCGRG00001022594	Trmt1	90	66.777	Cricetulus_griseus_chok1gshd
ENSGAGG00000016432	TRMT1	89	66.777	ENSCGRG00000017732	Trmt1	89	66.777	Cricetulus_griseus_crigri
ENSGAGG00000016432	TRMT1	84	68.984	ENSCSEG00000001643	trmt1	84	70.760	Cynoglossus_semilaevis
ENSGAGG00000016432	TRMT1	89	67.731	ENSCVAG00000011886	trmt1	89	67.731	Cyprinodon_variegatus
ENSGAGG00000016432	TRMT1	90	64.123	ENSDARG00000010978	trmt1	90	64.448	Danio_rerio
ENSGAGG00000016432	TRMT1	79	45.872	ENSDNOG00000048240	-	92	45.872	Dasypus_novemcinctus
ENSGAGG00000016432	TRMT1	89	65.466	ENSDORG00000014298	Trmt1	93	65.466	Dipodomys_ordii
ENSGAGG00000016432	TRMT1	80	47.985	FBgn0032430	CG6388	92	47.985	Drosophila_melanogaster
ENSGAGG00000016432	TRMT1	78	54.932	ENSEBUG00000003449	trmt1	76	55.086	Eptatretus_burgeri
ENSGAGG00000016432	TRMT1	89	67.427	ENSEASG00005004050	TRMT1	96	67.427	Equus_asinus_asinus
ENSGAGG00000016432	TRMT1	89	67.590	ENSECAG00000016149	TRMT1	96	67.590	Equus_caballus
ENSGAGG00000016432	TRMT1	85	66.146	ENSELUG00000021659	trmt1	86	66.146	Esox_lucius
ENSGAGG00000016432	TRMT1	86	69.712	ENSFCAG00000000483	TRMT1	89	69.712	Felis_catus
ENSGAGG00000016432	TRMT1	94	64.396	ENSFDAG00000007386	TRMT1	95	64.396	Fukomys_damarensis
ENSGAGG00000016432	TRMT1	82	69.455	ENSFHEG00000012865	trmt1	90	69.273	Fundulus_heteroclitus
ENSGAGG00000016432	TRMT1	84	62.345	ENSGMOG00000006564	trmt1	98	63.055	Gadus_morhua
ENSGAGG00000016432	TRMT1	95	64.734	ENSGAFG00000011862	trmt1	88	71.277	Gambusia_affinis
ENSGAGG00000016432	TRMT1	84	68.384	ENSGACG00000000227	trmt1	91	68.496	Gasterosteus_aculeatus
ENSGAGG00000016432	TRMT1	86	69.847	ENSGGOG00000014007	TRMT1	91	68.833	Gorilla_gorilla
ENSGAGG00000016432	TRMT1	82	62.069	ENSHBUG00000008821	trmt1	92	62.069	Haplochromis_burtoni
ENSGAGG00000016432	TRMT1	94	64.706	ENSHGLG00000015972	TRMT1	96	64.706	Heterocephalus_glaber_female
ENSGAGG00000016432	TRMT1	93	64.250	ENSHGLG00100018112	TRMT1	96	64.250	Heterocephalus_glaber_male
ENSGAGG00000016432	TRMT1	84	65.836	ENSHCOG00000009447	trmt1	87	65.836	Hippocampus_comes
ENSGAGG00000016432	TRMT1	87	64.959	ENSIPUG00000002899	trmt1	88	65.442	Ictalurus_punctatus
ENSGAGG00000016432	TRMT1	91	66.720	ENSSTOG00000012531	TRMT1	93	66.720	Ictidomys_tridecemlineatus
ENSGAGG00000016432	TRMT1	92	66.613	ENSJJAG00000017154	Trmt1	93	66.188	Jaculus_jaculus
ENSGAGG00000016432	TRMT1	85	70.547	ENSKMAG00000011809	trmt1	95	69.542	Kryptolebias_marmoratus
ENSGAGG00000016432	TRMT1	89	67.905	ENSLBEG00000012703	trmt1	88	67.905	Labrus_bergylta
ENSGAGG00000016432	TRMT1	84	63.121	ENSLACG00000014585	TRMT1	97	62.222	Latimeria_chalumnae
ENSGAGG00000016432	TRMT1	75	71.882	ENSLOCG00000006479	trmt1	97	64.298	Lepisosteus_oculatus
ENSGAGG00000016432	TRMT1	92	66.774	ENSLAFG00000014072	TRMT1	94	66.774	Loxodonta_africana
ENSGAGG00000016432	TRMT1	93	66.091	ENSMFAG00000033143	TRMT1	94	66.091	Macaca_fascicularis
ENSGAGG00000016432	TRMT1	93	62.461	ENSMMUG00000001167	TRMT1	95	62.461	Macaca_mulatta
ENSGAGG00000016432	TRMT1	93	66.091	ENSMNEG00000037867	TRMT1	94	66.091	Macaca_nemestrina
ENSGAGG00000016432	TRMT1	93	66.091	ENSMLEG00000016142	TRMT1	95	66.091	Mandrillus_leucophaeus
ENSGAGG00000016432	TRMT1	87	69.297	ENSMAMG00000004357	trmt1	88	69.297	Mastacembelus_armatus
ENSGAGG00000016432	TRMT1	93	64.172	ENSMZEG00005014510	trmt1	92	64.172	Maylandia_zebra
ENSGAGG00000016432	TRMT1	90	66.612	ENSMAUG00000011134	Trmt1	92	66.612	Mesocricetus_auratus
ENSGAGG00000016432	TRMT1	89	67.700	ENSMICG00000000793	TRMT1	92	67.700	Microcebus_murinus
ENSGAGG00000016432	TRMT1	94	65.679	ENSMOCG00000015895	Trmt1	94	65.679	Microtus_ochrogaster
ENSGAGG00000016432	TRMT1	85	69.504	ENSMMOG00000011097	trmt1	92	69.504	Mola_mola
ENSGAGG00000016432	TRMT1	87	69.640	ENSMODG00000011619	TRMT1	95	69.640	Monodelphis_domestica
ENSGAGG00000016432	TRMT1	88	68.833	MGP_CAROLIEiJ_G0031304	Trmt1	99	66.031	Mus_caroli
ENSGAGG00000016432	TRMT1	90	67.419	ENSMUSG00000001909	Trmt1	99	65.414	Mus_musculus
ENSGAGG00000016432	TRMT1	90	67.581	MGP_SPRETEiJ_G0032422	Trmt1	99	65.789	Mus_spretus
ENSGAGG00000016432	TRMT1	86	70.869	ENSMPUG00000004210	TRMT1	84	70.869	Mustela_putorius_furo
ENSGAGG00000016432	TRMT1	89	68.026	ENSMLUG00000012809	TRMT1	91	68.026	Myotis_lucifugus
ENSGAGG00000016432	TRMT1	89	67.213	ENSNGAG00000022486	Trmt1	92	67.213	Nannospalax_galili
ENSGAGG00000016432	TRMT1	72	73.620	ENSNBRG00000024376	trmt1	84	73.620	Neolamprologus_brichardi
ENSGAGG00000016432	TRMT1	68	71.477	ENSNLEG00000013019	-	89	71.477	Nomascus_leucogenys
ENSGAGG00000016432	TRMT1	87	69.535	ENSMEUG00000013756	TRMT1	99	69.535	Notamacropus_eugenii
ENSGAGG00000016432	TRMT1	72	72.000	ENSOPRG00000009471	-	74	72.000	Ochotona_princeps
ENSGAGG00000016432	TRMT1	88	68.144	ENSODEG00000010323	TRMT1	93	68.144	Octodon_degus
ENSGAGG00000016432	TRMT1	94	66.457	ENSONIG00000000400	trmt1	98	66.457	Oreochromis_niloticus
ENSGAGG00000016432	TRMT1	83	69.115	ENSOCUG00000021934	TRMT1	97	69.115	Oryctolagus_cuniculus
ENSGAGG00000016432	TRMT1	85	67.770	ENSORLG00000020074	trmt1	90	67.770	Oryzias_latipes
ENSGAGG00000016432	TRMT1	85	70.671	ENSORLG00020007561	trmt1	89	69.930	Oryzias_latipes_hni
ENSGAGG00000016432	TRMT1	85	70.671	ENSORLG00015006547	trmt1	86	70.671	Oryzias_latipes_hsok
ENSGAGG00000016432	TRMT1	89	69.646	ENSOMEG00000019343	trmt1	90	69.646	Oryzias_melastigma
ENSGAGG00000016432	TRMT1	88	67.887	ENSOGAG00000025576	TRMT1	94	68.053	Otolemur_garnettii
ENSGAGG00000016432	TRMT1	93	53.953	ENSOARG00000009397	TRMT1	88	53.953	Ovis_aries
ENSGAGG00000016432	TRMT1	86	63.032	ENSPPRG00000012117	TRMT1	90	62.818	Panthera_pardus
ENSGAGG00000016432	TRMT1	65	75.175	ENSPTIG00000008833	TRMT1	85	75.175	Panthera_tigris_altaica
ENSGAGG00000016432	TRMT1	86	69.847	ENSPTRG00000010557	TRMT1	91	68.833	Pan_troglodytes
ENSGAGG00000016432	TRMT1	82	51.845	ENSPTRG00000050421	-	89	51.845	Pan_troglodytes
ENSGAGG00000016432	TRMT1	93	66.091	ENSPANG00000009247	TRMT1	94	66.091	Papio_anubis
ENSGAGG00000016432	TRMT1	85	51.718	ENSPANG00000034058	-	89	51.718	Papio_anubis
ENSGAGG00000016432	TRMT1	85	68.739	ENSPKIG00000005309	trmt1	84	68.739	Paramormyrops_kingsleyae
ENSGAGG00000016432	TRMT1	95	71.607	ENSPSIG00000008762	TRMT1	92	71.607	Pelodiscus_sinensis
ENSGAGG00000016432	TRMT1	84	70.766	ENSPMGG00000019764	trmt1	98	66.396	Periophthalmus_magnuspinnatus
ENSGAGG00000016432	TRMT1	88	67.993	ENSPEMG00000016247	Trmt1	90	68.447	Peromyscus_maniculatus_bairdii
ENSGAGG00000016432	TRMT1	84	64.516	ENSPMAG00000004329	trmt1	89	64.516	Petromyzon_marinus
ENSGAGG00000016432	TRMT1	96	66.149	ENSPCIG00000019273	TRMT1	97	66.149	Phascolarctos_cinereus
ENSGAGG00000016432	TRMT1	88	69.744	ENSPFOG00000008527	trmt1	89	69.744	Poecilia_formosa
ENSGAGG00000016432	TRMT1	88	68.547	ENSPLAG00000018788	trmt1	90	71.218	Poecilia_latipinna
ENSGAGG00000016432	TRMT1	90	68.220	ENSPMEG00000013120	trmt1	92	68.220	Poecilia_mexicana
ENSGAGG00000016432	TRMT1	84	70.745	ENSPREG00000000211	trmt1	85	70.922	Poecilia_reticulata
ENSGAGG00000016432	TRMT1	86	69.336	ENSPPYG00000009622	TRMT1	91	68.333	Pongo_abelii
ENSGAGG00000016432	TRMT1	90	62.500	ENSPCAG00000003698	TRMT1	94	62.500	Procavia_capensis
ENSGAGG00000016432	TRMT1	89	67.700	ENSPCOG00000008653	TRMT1	93	67.700	Propithecus_coquereli
ENSGAGG00000016432	TRMT1	89	68.249	ENSPVAG00000015076	TRMT1	92	68.249	Pteropus_vampyrus
ENSGAGG00000016432	TRMT1	84	66.726	ENSPNYG00000013960	trmt1	91	66.726	Pundamilia_nyererei
ENSGAGG00000016432	TRMT1	70	69.703	ENSPNAG00000024859	trmt1	82	69.703	Pygocentrus_nattereri
ENSGAGG00000016432	TRMT1	88	67.833	ENSRNOG00000002914	Trmt1	93	67.833	Rattus_norvegicus
ENSGAGG00000016432	TRMT1	85	50.865	ENSRBIG00000037505	-	89	50.865	Rhinopithecus_bieti
ENSGAGG00000016432	TRMT1	93	65.566	ENSRBIG00000038324	TRMT1	94	65.566	Rhinopithecus_bieti
ENSGAGG00000016432	TRMT1	93	65.723	ENSRROG00000028599	TRMT1	94	65.723	Rhinopithecus_roxellana
ENSGAGG00000016432	TRMT1	85	50.000	ENSRROG00000031847	-	88	50.000	Rhinopithecus_roxellana
ENSGAGG00000016432	TRMT1	80	36.762	YDR120C	-	92	37.873	Saccharomyces_cerevisiae
ENSGAGG00000016432	TRMT1	87	66.214	ENSSBOG00000028861	TRMT1	93	67.478	Saimiri_boliviensis_boliviensis
ENSGAGG00000016432	TRMT1	84	72.114	ENSSHAG00000014381	TRMT1	99	69.333	Sarcophilus_harrisii
ENSGAGG00000016432	TRMT1	85	69.489	ENSSFOG00015004139	trmt1	84	69.489	Scleropages_formosus
ENSGAGG00000016432	TRMT1	85	71.678	ENSSMAG00000021136	trmt1	85	71.678	Scophthalmus_maximus
ENSGAGG00000016432	TRMT1	84	71.277	ENSSDUG00000012740	trmt1	89	68.509	Seriola_dumerili
ENSGAGG00000016432	TRMT1	84	70.922	ENSSLDG00000005971	trmt1	89	68.174	Seriola_lalandi_dorsalis
ENSGAGG00000016432	TRMT1	76	70.250	ENSSARG00000005138	TRMT1	91	70.250	Sorex_araneus
ENSGAGG00000016432	TRMT1	92	57.461	ENSSPUG00000001084	TRMT1	94	63.177	Sphenodon_punctatus
ENSGAGG00000016432	TRMT1	85	68.783	ENSSPAG00000007153	trmt1	94	68.783	Stegastes_partitus
ENSGAGG00000016432	TRMT1	87	69.595	ENSSSCG00000013744	TRMT1	93	69.595	Sus_scrofa
ENSGAGG00000016432	TRMT1	83	67.257	ENSTRUG00000010700	trmt1	85	67.434	Takifugu_rubripes
ENSGAGG00000016432	TRMT1	84	70.841	ENSTNIG00000018808	trmt1	97	70.841	Tetraodon_nigroviridis
ENSGAGG00000016432	TRMT1	89	65.147	ENSTTRG00000006379	TRMT1	93	65.147	Tursiops_truncatus
ENSGAGG00000016432	TRMT1	94	66.357	ENSUAMG00000022911	TRMT1	95	68.257	Ursus_americanus
ENSGAGG00000016432	TRMT1	88	68.144	ENSUMAG00000006027	TRMT1	95	68.144	Ursus_maritimus
ENSGAGG00000016432	TRMT1	87	69.799	ENSVVUG00000024177	TRMT1	90	69.799	Vulpes_vulpes
ENSGAGG00000016432	TRMT1	75	74.051	ENSXETG00000033863	TRMT1	95	74.051	Xenopus_tropicalis
ENSGAGG00000016432	TRMT1	84	71.454	ENSXCOG00000015733	trmt1	88	71.631	Xiphophorus_couchianus
ENSGAGG00000016432	TRMT1	85	70.547	ENSXMAG00000013823	trmt1	98	70.723	Xiphophorus_maculatus