EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000016542 (Gene tree)
Gene ID: -
Gene Symbol: MSI2
Alias: -
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 389385 bases
Position: chrPPEB01000518.1:102860-492244
Accession: 18585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000022548	RRM_1	PF00076.22	1.7e-28	1	2
ENSGAGP00000022548	RRM_1	PF00076.22	1.7e-28	2	2
ENSGAGP00000022554	RRM_1	PF00076.22	9.7e-23	1	2
ENSGAGP00000022554	RRM_1	PF00076.22	9.7e-23	2	2
ENSGAGP00000022552	RRM_1	PF00076.22	1e-22	1	2
ENSGAGP00000022552	RRM_1	PF00076.22	1e-22	2	2
ENSGAGP00000022550	RRM_1	PF00076.22	1.1e-22	1	2
ENSGAGP00000022550	RRM_1	PF00076.22	1.1e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000025691	MSI2-202	1300	-	ENSGAGP00000022550	312 (aa)	-	-
ENSGAGT00000025689	MSI2-201	1224	-	ENSGAGP00000022548	407 (aa)	-	-
ENSGAGT00000025694	MSI2-203	1222	-	ENSGAGP00000022552	312 (aa)	-	-
ENSGAGT00000025696	MSI2-204	1276	-	ENSGAGP00000022554	304 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000016542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000016542's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000016542	MSI2	100	72.492	ENSGAGG00000016037	MSI1	100	74.194
ENSGAGG00000016542	MSI2	56	41.290	ENSGAGG00000005632	HNRNPA0	73	37.245

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000016542	MSI2	100	96.053	ENSG00000153944	MSI2	100	96.053	Homo_sapiens
ENSGAGG00000016542	MSI2	100	85.246	ENSAPOG00000001658	msi2a	100	88.934	Acanthochromis_polyacanthus
ENSGAGG00000016542	MSI2	100	96.053	ENSAMEG00000002697	MSI2	99	96.053	Ailuropoda_melanoleuca
ENSGAGG00000016542	MSI2	100	81.373	ENSACIG00000009475	msi2a	100	81.127	Amphilophus_citrinellus
ENSGAGG00000016542	MSI2	100	85.246	ENSAPEG00000007706	msi2a	100	87.547	Amphiprion_percula
ENSGAGG00000016542	MSI2	100	85.855	ENSATEG00000003301	-	100	95.327	Anabas_testudineus
ENSGAGG00000016542	MSI2	100	85.246	ENSATEG00000010498	msi2a	100	88.934	Anabas_testudineus
ENSGAGG00000016542	MSI2	91	90.000	ENSACAG00000005452	MSI2	95	90.000	Anolis_carolinensis
ENSGAGG00000016542	MSI2	100	90.132	ENSANAG00000037827	MSI2	100	92.958	Aotus_nancymaae
ENSGAGG00000016542	MSI2	100	84.918	ENSACLG00000007752	msi2a	100	88.525	Astatotilapia_calliptera
ENSGAGG00000016542	MSI2	100	86.557	ENSAMXG00000032796	msi2a	96	91.020	Astyanax_mexicanus
ENSGAGG00000016542	MSI2	100	86.842	ENSAMXG00000010474	msi2b	97	96.875	Astyanax_mexicanus
ENSGAGG00000016542	MSI2	100	89.803	ENSBTAG00000004406	MSI2	97	95.021	Bos_taurus
ENSGAGG00000016542	MSI2	65	58.407	WBGene00003423	msi-1	80	58.407	Caenorhabditis_elegans
ENSGAGG00000016542	MSI2	100	90.132	ENSCJAG00000013998	MSI2	100	92.958	Callithrix_jacchus
ENSGAGG00000016542	MSI2	100	96.053	ENSCAFG00020025620	MSI2	81	96.053	Canis_lupus_dingo
ENSGAGG00000016542	MSI2	100	89.803	ENSCHIG00000016580	MSI2	100	91.549	Capra_hircus
ENSGAGG00000016542	MSI2	100	87.171	ENSCPOG00000034042	MSI2	99	93.119	Cavia_porcellus
ENSGAGG00000016542	MSI2	100	90.132	ENSCCAG00000033927	MSI2	100	92.958	Cebus_capucinus
ENSGAGG00000016542	MSI2	100	90.132	ENSCATG00000040879	MSI2	100	92.958	Cercocebus_atys
ENSGAGG00000016542	MSI2	100	96.053	ENSCLAG00000014325	MSI2	94	96.053	Chinchilla_lanigera
ENSGAGG00000016542	MSI2	100	90.132	ENSCSAG00000005633	MSI2	100	92.958	Chlorocebus_sabaeus
ENSGAGG00000016542	MSI2	72	98.039	ENSCHOG00000008660	MSI2	81	98.039	Choloepus_hoffmanni
ENSGAGG00000016542	MSI2	100	100.000	ENSCPBG00000009942	MSI2	96	100.000	Chrysemys_picta_bellii
ENSGAGG00000016542	MSI2	59	72.000	ENSCING00000018579	-	97	47.773	Ciona_intestinalis
ENSGAGG00000016542	MSI2	60	67.188	ENSCSAVG00000010397	-	76	62.037	Ciona_savignyi
ENSGAGG00000016542	MSI2	100	96.053	ENSCANG00000036414	MSI2	100	96.053	Colobus_angolensis_palliatus
ENSGAGG00000016542	MSI2	100	89.836	ENSCGRG00001013330	Msi2	100	92.075	Cricetulus_griseus_chok1gshd
ENSGAGG00000016542	MSI2	100	95.738	ENSCGRG00000003141	Msi2	100	95.738	Cricetulus_griseus_crigri
ENSGAGG00000016542	MSI2	91	65.455	ENSCSEG00000013557	msi2a	83	80.734	Cynoglossus_semilaevis
ENSGAGG00000016542	MSI2	100	76.645	ENSCSEG00000003266	-	100	79.623	Cynoglossus_semilaevis
ENSGAGG00000016542	MSI2	100	84.918	ENSCVAG00000017075	msi2a	100	88.934	Cyprinodon_variegatus
ENSGAGG00000016542	MSI2	100	79.487	ENSDARG00000032614	msi2b	100	99.010	Danio_rerio
ENSGAGG00000016542	MSI2	100	81.418	ENSDARG00000033901	msi2a	100	81.373	Danio_rerio
ENSGAGG00000016542	MSI2	100	90.132	ENSDNOG00000014501	MSI2	100	99.107	Dasypus_novemcinctus
ENSGAGG00000016542	MSI2	73	96.970	ENSDORG00000005394	Msi2	79	92.958	Dipodomys_ordii
ENSGAGG00000016542	MSI2	100	57.407	FBgn0260943	Rbp6	90	66.000	Drosophila_melanogaster
ENSGAGG00000016542	MSI2	50	75.658	ENSETEG00000012450	-	64	75.658	Echinops_telfairi
ENSGAGG00000016542	MSI2	98	68.000	ENSEBUG00000006732	msi2a	86	67.333	Eptatretus_burgeri
ENSGAGG00000016542	MSI2	100	93.092	ENSEASG00005002965	MSI2	97	90.031	Equus_asinus_asinus
ENSGAGG00000016542	MSI2	100	99.013	ENSECAG00000011435	MSI2	94	99.013	Equus_caballus
ENSGAGG00000016542	MSI2	96	75.269	ENSEEUG00000007810	MSI2	100	83.663	Erinaceus_europaeus
ENSGAGG00000016542	MSI2	100	90.228	ENSELUG00000001361	msi2b	93	90.228	Esox_lucius
ENSGAGG00000016542	MSI2	100	86.184	ENSELUG00000011747	msi2a	100	89.811	Esox_lucius
ENSGAGG00000016542	MSI2	100	90.132	ENSFCAG00000041686	MSI2	100	92.958	Felis_catus
ENSGAGG00000016542	MSI2	100	96.053	ENSFDAG00000016118	MSI2	100	96.053	Fukomys_damarensis
ENSGAGG00000016542	MSI2	100	84.918	ENSFHEG00000000084	msi2a	100	87.547	Fundulus_heteroclitus
ENSGAGG00000016542	MSI2	100	96.382	ENSGALG00000005567	MSI2	94	96.382	Gallus_gallus
ENSGAGG00000016542	MSI2	95	76.271	ENSGAFG00000006974	msi2a	99	78.947	Gambusia_affinis
ENSGAGG00000016542	MSI2	100	96.053	ENSGGOG00000013182	MSI2	100	96.053	Gorilla_gorilla
ENSGAGG00000016542	MSI2	100	84.918	ENSHBUG00000020800	msi2a	100	88.525	Haplochromis_burtoni
ENSGAGG00000016542	MSI2	100	85.855	ENSHGLG00000012444	MSI2	84	85.855	Heterocephalus_glaber_female
ENSGAGG00000016542	MSI2	89	94.884	ENSHGLG00100003744	MSI2	100	94.884	Heterocephalus_glaber_male
ENSGAGG00000016542	MSI2	97	67.773	ENSHCOG00000017241	-	98	66.746	Hippocampus_comes
ENSGAGG00000016542	MSI2	97	82.095	ENSHCOG00000000266	msi2a	91	88.679	Hippocampus_comes
ENSGAGG00000016542	MSI2	100	85.197	ENSIPUG00000021097	msi2a	100	90.164	Ictalurus_punctatus
ENSGAGG00000016542	MSI2	100	83.863	ENSIPUG00000003732	msi2b	100	84.906	Ictalurus_punctatus
ENSGAGG00000016542	MSI2	100	87.171	ENSSTOG00000007884	MSI2	99	93.119	Ictidomys_tridecemlineatus
ENSGAGG00000016542	MSI2	89	85.116	ENSJJAG00000006292	-	100	83.410	Jaculus_jaculus
ENSGAGG00000016542	MSI2	100	81.907	ENSKMAG00000009494	msi2a	96	88.679	Kryptolebias_marmoratus
ENSGAGG00000016542	MSI2	100	84.868	ENSLBEG00000007061	msi2a	100	87.547	Labrus_bergylta
ENSGAGG00000016542	MSI2	94	73.684	ENSLBEG00000026223	-	100	73.684	Labrus_bergylta
ENSGAGG00000016542	MSI2	100	86.308	ENSLOCG00000004675	msi2b	100	86.275	Lepisosteus_oculatus
ENSGAGG00000016542	MSI2	100	96.053	ENSMFAG00000003775	MSI2	100	96.053	Macaca_fascicularis
ENSGAGG00000016542	MSI2	100	96.053	ENSMMUG00000002069	MSI2	100	96.053	Macaca_mulatta
ENSGAGG00000016542	MSI2	100	90.132	ENSMNEG00000045275	MSI2	100	92.958	Macaca_nemestrina
ENSGAGG00000016542	MSI2	100	96.053	ENSMLEG00000033888	MSI2	100	96.053	Mandrillus_leucophaeus
ENSGAGG00000016542	MSI2	100	82.895	ENSMAMG00000002488	-	99	85.526	Mastacembelus_armatus
ENSGAGG00000016542	MSI2	100	84.262	ENSMAMG00000010503	msi2a	100	88.934	Mastacembelus_armatus
ENSGAGG00000016542	MSI2	100	84.539	ENSMZEG00005007676	msi2a	100	89.057	Maylandia_zebra
ENSGAGG00000016542	MSI2	100	95.738	ENSMAUG00000003862	Msi2	94	95.738	Mesocricetus_auratus
ENSGAGG00000016542	MSI2	100	90.132	ENSMICG00000013598	-	100	92.958	Microcebus_murinus
ENSGAGG00000016542	MSI2	100	69.508	ENSMICG00000032913	-	94	86.111	Microcebus_murinus
ENSGAGG00000016542	MSI2	100	96.053	ENSMOCG00000005820	Msi2	94	96.053	Microtus_ochrogaster
ENSGAGG00000016542	MSI2	96	81.333	ENSMMOG00000008348	msi2a	85	95.050	Mola_mola
ENSGAGG00000016542	MSI2	89	94.419	ENSMODG00000014790	MSI2	100	94.419	Monodelphis_domestica
ENSGAGG00000016542	MSI2	100	95.146	ENSMALG00000000071	msi2a	100	88.934	Monopterus_albus
ENSGAGG00000016542	MSI2	100	96.053	MGP_CAROLIEiJ_G0016948	Msi2	100	98.947	Mus_caroli
ENSGAGG00000016542	MSI2	100	96.053	ENSMUSG00000069769	Msi2	100	98.947	Mus_musculus
ENSGAGG00000016542	MSI2	100	96.053	MGP_PahariEiJ_G0018079	Msi2	100	98.947	Mus_pahari
ENSGAGG00000016542	MSI2	100	96.053	MGP_SPRETEiJ_G0017795	Msi2	100	98.947	Mus_spretus
ENSGAGG00000016542	MSI2	100	90.132	ENSMPUG00000015377	MSI2	97	95.021	Mustela_putorius_furo
ENSGAGG00000016542	MSI2	100	90.132	ENSMLUG00000007865	MSI2	97	97.817	Myotis_lucifugus
ENSGAGG00000016542	MSI2	100	96.053	ENSNGAG00000017807	Msi2	94	96.053	Nannospalax_galili
ENSGAGG00000016542	MSI2	100	84.539	ENSNBRG00000014596	msi2a	100	87.170	Neolamprologus_brichardi
ENSGAGG00000016542	MSI2	100	96.053	ENSNLEG00000008059	MSI2	99	96.053	Nomascus_leucogenys
ENSGAGG00000016542	MSI2	50	88.158	ENSOPRG00000000872	-	64	88.158	Ochotona_princeps
ENSGAGG00000016542	MSI2	100	96.053	ENSODEG00000011974	MSI2	94	96.053	Octodon_degus
ENSGAGG00000016542	MSI2	92	98.969	ENSOANG00000005667	MSI2	92	84.949	Ornithorhynchus_anatinus
ENSGAGG00000016542	MSI2	100	90.132	ENSOCUG00000010440	MSI2	97	95.021	Oryctolagus_cuniculus
ENSGAGG00000016542	MSI2	100	84.868	ENSORLG00000009671	msi2a	100	85.283	Oryzias_latipes
ENSGAGG00000016542	MSI2	100	85.246	ENSORLG00020021556	msi2a	100	88.934	Oryzias_latipes_hni
ENSGAGG00000016542	MSI2	100	84.868	ENSORLG00015004592	msi2a	100	85.283	Oryzias_latipes_hsok
ENSGAGG00000016542	MSI2	100	84.868	ENSOMEG00000000146	msi2a	96	95.089	Oryzias_melastigma
ENSGAGG00000016542	MSI2	100	85.526	ENSOGAG00000005621	MSI2	99	92.958	Otolemur_garnettii
ENSGAGG00000016542	MSI2	100	96.053	ENSPPAG00000037697	MSI2	100	96.053	Pan_paniscus
ENSGAGG00000016542	MSI2	100	90.132	ENSPPRG00000001848	MSI2	92	97.959	Panthera_pardus
ENSGAGG00000016542	MSI2	100	96.053	ENSPTIG00000021678	MSI2	96	96.053	Panthera_tigris_altaica
ENSGAGG00000016542	MSI2	64	83.333	ENSPTIG00000021873	-	90	75.630	Panthera_tigris_altaica
ENSGAGG00000016542	MSI2	100	96.053	ENSPTRG00000009437	MSI2	100	96.053	Pan_troglodytes
ENSGAGG00000016542	MSI2	100	90.132	ENSPANG00000022319	MSI2	100	92.958	Papio_anubis
ENSGAGG00000016542	MSI2	100	78.485	ENSPKIG00000007038	-	96	86.475	Paramormyrops_kingsleyae
ENSGAGG00000016542	MSI2	100	96.078	ENSPSIG00000008618	MSI2	100	96.069	Pelodiscus_sinensis
ENSGAGG00000016542	MSI2	100	84.211	ENSPMGG00000005888	msi2a	100	87.170	Periophthalmus_magnuspinnatus
ENSGAGG00000016542	MSI2	100	99.013	ENSPCIG00000006063	MSI2	94	99.013	Phascolarctos_cinereus
ENSGAGG00000016542	MSI2	99	82.237	ENSPREG00000000881	msi2a	99	87.547	Poecilia_reticulata
ENSGAGG00000016542	MSI2	87	85.985	ENSPPYG00000008244	-	100	94.828	Pongo_abelii
ENSGAGG00000016542	MSI2	59	96.970	ENSPCAG00000010552	MSI2	100	92.958	Procavia_capensis
ENSGAGG00000016542	MSI2	100	80.921	ENSPVAG00000017053	MSI2	85	99.435	Pteropus_vampyrus
ENSGAGG00000016542	MSI2	100	84.539	ENSPNYG00000018393	msi2a	100	89.057	Pundamilia_nyererei
ENSGAGG00000016542	MSI2	100	86.230	ENSPNAG00000000844	msi2b	96	89.796	Pygocentrus_nattereri
ENSGAGG00000016542	MSI2	100	86.557	ENSPNAG00000014957	msi2a	96	90.612	Pygocentrus_nattereri
ENSGAGG00000016542	MSI2	100	90.132	ENSRNOG00000025338	Msi2	100	99.065	Rattus_norvegicus
ENSGAGG00000016542	MSI2	100	96.053	ENSSBOG00000026425	MSI2	100	96.053	Saimiri_boliviensis_boliviensis
ENSGAGG00000016542	MSI2	100	96.053	ENSSHAG00000008672	MSI2	100	96.053	Sarcophilus_harrisii
ENSGAGG00000016542	MSI2	100	82.566	ENSSFOG00015021687	-	97	93.596	Scleropages_formosus
ENSGAGG00000016542	MSI2	100	70.488	ENSSFOG00015012168	msi2b	100	70.048	Scleropages_formosus
ENSGAGG00000016542	MSI2	100	85.246	ENSSMAG00000018484	msi2a	100	88.934	Scophthalmus_maximus
ENSGAGG00000016542	MSI2	100	85.246	ENSSDUG00000014507	msi2a	100	88.934	Seriola_dumerili
ENSGAGG00000016542	MSI2	100	83.882	ENSSDUG00000021968	-	99	84.868	Seriola_dumerili
ENSGAGG00000016542	MSI2	100	84.868	ENSSLDG00000017172	msi2a	100	87.547	Seriola_lalandi_dorsalis
ENSGAGG00000016542	MSI2	100	79.276	ENSSPAG00000017793	msi2a	96	88.934	Stegastes_partitus
ENSGAGG00000016542	MSI2	100	99.013	ENSSSCG00000038505	MSI2	96	98.077	Sus_scrofa
ENSGAGG00000016542	MSI2	89	95.814	ENSTGUG00000008452	MSI2	100	95.814	Taeniopygia_guttata
ENSGAGG00000016542	MSI2	100	84.211	ENSTRUG00000021248	msi2a	100	86.716	Takifugu_rubripes
ENSGAGG00000016542	MSI2	63	83.854	ENSTBEG00000001241	MSI2	73	75.720	Tupaia_belangeri
ENSGAGG00000016542	MSI2	100	81.061	ENSTTRG00000002189	MSI2	100	98.438	Tursiops_truncatus
ENSGAGG00000016542	MSI2	100	90.132	ENSUAMG00000000700	MSI2	96	99.015	Ursus_americanus
ENSGAGG00000016542	MSI2	100	73.802	ENSUMAG00000000505	MSI2	95	98.964	Ursus_maritimus
ENSGAGG00000016542	MSI2	55	82.635	ENSVPAG00000006837	-	62	82.635	Vicugna_pacos
ENSGAGG00000016542	MSI2	100	96.053	ENSVVUG00000011783	MSI2	94	96.053	Vulpes_vulpes
ENSGAGG00000016542	MSI2	100	80.882	ENSXCOG00000006113	msi2a	100	81.127	Xiphophorus_couchianus
ENSGAGG00000016542	MSI2	100	84.918	ENSXMAG00000000608	msi2a	100	88.934	Xiphophorus_maculatus