EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000016730 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 11530 bases
Position: chrPPEB01003425.1:179544-191073
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000022822	PseudoU_synth_1	PF01416.20	5.3e-15	1	1
ENSGAGP00000022824	PseudoU_synth_1	PF01416.20	8.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000026003	-	1047	-	ENSGAGP00000022822	348 (aa)	-	-
ENSGAGT00000026005	-	1251	-	ENSGAGP00000022824	416 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000016730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000016730's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000016730	-	94	78.614	ENSG00000177192	PUS1	90	77.976	Homo_sapiens
ENSGAGG00000016730	-	94	68.085	ENSAPOG00000007254	pus1	78	68.085	Acanthochromis_polyacanthus
ENSGAGG00000016730	-	90	82.692	ENSAMEG00000013715	PUS1	75	83.713	Ailuropoda_melanoleuca
ENSGAGG00000016730	-	93	68.000	ENSACIG00000009169	pus1	79	68.000	Amphilophus_citrinellus
ENSGAGG00000016730	-	94	70.517	ENSAOCG00000022207	pus1	78	70.517	Amphiprion_ocellaris
ENSGAGG00000016730	-	94	70.517	ENSAPEG00000006039	pus1	84	70.517	Amphiprion_percula
ENSGAGG00000016730	-	94	68.693	ENSATEG00000020688	pus1	84	68.693	Anabas_testudineus
ENSGAGG00000016730	-	88	82.410	ENSACAG00000007367	PUS1	88	78.182	Anolis_carolinensis
ENSGAGG00000016730	-	92	77.370	ENSANAG00000036192	PUS1	100	77.370	Aotus_nancymaae
ENSGAGG00000016730	-	94	69.605	ENSACLG00000020868	pus1	84	69.605	Astatotilapia_calliptera
ENSGAGG00000016730	-	93	70.062	ENSAMXG00000008710	pus1	75	70.062	Astyanax_mexicanus
ENSGAGG00000016730	-	94	79.819	ENSBTAG00000012990	PUS1	83	79.819	Bos_taurus
ENSGAGG00000016730	-	87	41.587	WBGene00004248	pus-1	74	39.617	Caenorhabditis_elegans
ENSGAGG00000016730	-	73	79.134	ENSCJAG00000003720	PUS1	75	74.729	Callithrix_jacchus
ENSGAGG00000016730	-	88	82.736	ENSCAFG00000006429	PUS1	82	79.692	Canis_familiaris
ENSGAGG00000016730	-	88	82.736	ENSCAFG00020010737	PUS1	75	79.692	Canis_lupus_dingo
ENSGAGG00000016730	-	94	79.819	ENSCHIG00000000487	PUS1	83	79.819	Capra_hircus
ENSGAGG00000016730	-	95	75.522	ENSTSYG00000032605	PUS1	94	75.602	Carlito_syrichta
ENSGAGG00000016730	-	92	77.640	ENSCAPG00000006421	PUS1	100	77.950	Cavia_aperea
ENSGAGG00000016730	-	94	76.119	ENSCPOG00000001027	PUS1	93	67.254	Cavia_porcellus
ENSGAGG00000016730	-	95	76.119	ENSCCAG00000015879	PUS1	93	76.716	Cebus_capucinus
ENSGAGG00000016730	-	95	76.647	ENSCATG00000032870	PUS1	92	76.647	Cercocebus_atys
ENSGAGG00000016730	-	94	75.676	ENSCLAG00000011689	PUS1	82	73.852	Chinchilla_lanigera
ENSGAGG00000016730	-	94	77.341	ENSCSAG00000001879	PUS1	85	71.968	Chlorocebus_sabaeus
ENSGAGG00000016730	-	95	93.994	ENSCPBG00000024715	PUS1	97	93.878	Chrysemys_picta_bellii
ENSGAGG00000016730	-	91	44.340	ENSCING00000009426	-	89	43.413	Ciona_intestinalis
ENSGAGG00000016730	-	91	42.767	ENSCSAVG00000003751	-	72	40.517	Ciona_savignyi
ENSGAGG00000016730	-	95	70.448	ENSCANG00000035561	PUS1	92	70.448	Colobus_angolensis_palliatus
ENSGAGG00000016730	-	94	76.292	ENSCGRG00001019592	Pus1	80	74.910	Cricetulus_griseus_chok1gshd
ENSGAGG00000016730	-	94	76.292	ENSCGRG00000004048	Pus1	84	76.292	Cricetulus_griseus_crigri
ENSGAGG00000016730	-	94	66.768	ENSCSEG00000003629	pus1	78	66.768	Cynoglossus_semilaevis
ENSGAGG00000016730	-	94	68.997	ENSCVAG00000001265	pus1	79	68.997	Cyprinodon_variegatus
ENSGAGG00000016730	-	93	65.432	ENSDARG00000045562	pus1	99	65.704	Danio_rerio
ENSGAGG00000016730	-	89	78.896	ENSDNOG00000045576	PUS1	94	79.085	Dasypus_novemcinctus
ENSGAGG00000016730	-	92	79.205	ENSDORG00000011455	Pus1	100	79.205	Dipodomys_ordii
ENSGAGG00000016730	-	97	45.161	FBgn0038811	PUS1	82	45.161	Drosophila_melanogaster
ENSGAGG00000016730	-	87	75.987	ENSETEG00000019160	PUS1	76	74.679	Echinops_telfairi
ENSGAGG00000016730	-	87	41.718	ENSEBUG00000000368	-	65	39.266	Eptatretus_burgeri
ENSGAGG00000016730	-	94	79.573	ENSEASG00005016535	PUS1	76	79.573	Equus_asinus_asinus
ENSGAGG00000016730	-	94	79.573	ENSECAG00000006965	PUS1	82	79.573	Equus_caballus
ENSGAGG00000016730	-	93	69.301	ENSELUG00000010424	pus1	84	69.301	Esox_lucius
ENSGAGG00000016730	-	91	79.560	ENSFCAG00000010780	PUS1	73	81.759	Felis_catus
ENSGAGG00000016730	-	94	83.234	ENSFALG00000008273	PUS1	78	83.234	Ficedula_albicollis
ENSGAGG00000016730	-	94	78.182	ENSFDAG00000012518	PUS1	80	78.182	Fukomys_damarensis
ENSGAGG00000016730	-	94	68.389	ENSFHEG00000010504	pus1	79	68.389	Fundulus_heteroclitus
ENSGAGG00000016730	-	94	66.055	ENSGMOG00000008143	pus1	84	66.055	Gadus_morhua
ENSGAGG00000016730	-	94	83.784	ENSGALG00000002354	PUS1	81	83.784	Gallus_gallus
ENSGAGG00000016730	-	94	68.997	ENSGAFG00000006578	pus1	79	68.997	Gambusia_affinis
ENSGAGG00000016730	-	94	67.372	ENSGACG00000017566	pus1	87	65.125	Gasterosteus_aculeatus
ENSGAGG00000016730	-	94	78.614	ENSGGOG00000009178	PUS1	90	77.679	Gorilla_gorilla
ENSGAGG00000016730	-	94	69.909	ENSHBUG00000001316	pus1	84	69.909	Haplochromis_burtoni
ENSGAGG00000016730	-	94	75.610	ENSHGLG00000016086	PUS1	88	72.384	Heterocephalus_glaber_female
ENSGAGG00000016730	-	94	75.305	ENSHGLG00100019362	PUS1	88	72.093	Heterocephalus_glaber_male
ENSGAGG00000016730	-	94	67.781	ENSHCOG00000014288	pus1	76	67.781	Hippocampus_comes
ENSGAGG00000016730	-	93	72.531	ENSIPUG00000010387	pus1	79	74.277	Ictalurus_punctatus
ENSGAGG00000016730	-	88	80.782	ENSSTOG00000011245	PUS1	78	76.877	Ictidomys_tridecemlineatus
ENSGAGG00000016730	-	94	76.596	ENSJJAG00000000088	Pus1	81	75.269	Jaculus_jaculus
ENSGAGG00000016730	-	94	70.031	ENSKMAG00000012702	pus1	78	70.031	Kryptolebias_marmoratus
ENSGAGG00000016730	-	94	66.768	ENSLBEG00000002845	pus1	81	66.768	Labrus_bergylta
ENSGAGG00000016730	-	90	79.872	ENSLACG00000018598	PUS1	81	78.395	Latimeria_chalumnae
ENSGAGG00000016730	-	88	56.209	ENSLACG00000016044	-	93	56.209	Latimeria_chalumnae
ENSGAGG00000016730	-	94	78.723	ENSLOCG00000006127	pus1	83	78.723	Lepisosteus_oculatus
ENSGAGG00000016730	-	94	71.687	ENSLAFG00000028731	PUS1	89	70.482	Loxodonta_africana
ENSGAGG00000016730	-	99	75.287	ENSMFAG00000041194	PUS1	95	75.287	Macaca_fascicularis
ENSGAGG00000016730	-	93	78.704	ENSMMUG00000031463	PUS1	94	78.049	Macaca_mulatta
ENSGAGG00000016730	-	99	75.000	ENSMNEG00000002814	PUS1	95	75.000	Macaca_nemestrina
ENSGAGG00000016730	-	99	75.000	ENSMLEG00000043560	PUS1	100	77.914	Mandrillus_leucophaeus
ENSGAGG00000016730	-	94	67.781	ENSMAMG00000007371	pus1	78	67.781	Mastacembelus_armatus
ENSGAGG00000016730	-	94	69.909	ENSMZEG00005017746	pus1	78	69.909	Maylandia_zebra
ENSGAGG00000016730	-	93	84.802	ENSMGAG00000001958	PUS1	100	84.802	Meleagris_gallopavo
ENSGAGG00000016730	-	94	77.108	ENSMAUG00000001482	Pus1	81	75.887	Mesocricetus_auratus
ENSGAGG00000016730	-	94	77.246	ENSMICG00000030980	PUS1	83	77.246	Microcebus_murinus
ENSGAGG00000016730	-	94	76.596	ENSMOCG00000022311	Pus1	80	75.269	Microtus_ochrogaster
ENSGAGG00000016730	-	93	67.385	ENSMMOG00000021022	pus1	84	67.385	Mola_mola
ENSGAGG00000016730	-	94	78.443	ENSMODG00000015551	PUS1	75	78.443	Monodelphis_domestica
ENSGAGG00000016730	-	93	66.768	ENSMALG00000013202	pus1	78	66.768	Monopterus_albus
ENSGAGG00000016730	-	94	76.506	MGP_CAROLIEiJ_G0027551	Pus1	89	72.934	Mus_caroli
ENSGAGG00000016730	-	94	76.506	ENSMUSG00000029507	Pus1	89	72.934	Mus_musculus
ENSGAGG00000016730	-	94	76.506	MGP_PahariEiJ_G0024133	Pus1	89	72.934	Mus_pahari
ENSGAGG00000016730	-	94	76.506	MGP_SPRETEiJ_G0028549	Pus1	89	72.934	Mus_spretus
ENSGAGG00000016730	-	90	81.210	ENSMPUG00000002314	PUS1	80	81.210	Mustela_putorius_furo
ENSGAGG00000016730	-	94	76.994	ENSMLUG00000015790	PUS1	90	76.994	Myotis_lucifugus
ENSGAGG00000016730	-	94	76.596	ENSNGAG00000012976	Pus1	78	76.596	Nannospalax_galili
ENSGAGG00000016730	-	93	69.846	ENSNBRG00000020502	pus1	87	69.846	Neolamprologus_brichardi
ENSGAGG00000016730	-	90	77.987	ENSNLEG00000008505	PUS1	100	77.987	Nomascus_leucogenys
ENSGAGG00000016730	-	88	75.410	ENSMEUG00000002825	PUS1	97	67.598	Notamacropus_eugenii
ENSGAGG00000016730	-	89	70.455	ENSOPRG00000002701	-	91	65.418	Ochotona_princeps
ENSGAGG00000016730	-	88	80.456	ENSODEG00000008248	PUS1	81	80.456	Octodon_degus
ENSGAGG00000016730	-	94	68.563	ENSONIG00000003803	pus1	93	68.997	Oreochromis_niloticus
ENSGAGG00000016730	-	93	81.846	ENSOANG00000010619	PUS1	75	81.846	Ornithorhynchus_anatinus
ENSGAGG00000016730	-	87	82.508	ENSOCUG00000007310	PUS1	81	71.429	Oryctolagus_cuniculus
ENSGAGG00000016730	-	91	69.716	ENSORLG00000010787	pus1	76	70.159	Oryzias_latipes
ENSGAGG00000016730	-	91	69.716	ENSORLG00020011483	pus1	76	70.159	Oryzias_latipes_hni
ENSGAGG00000016730	-	90	70.159	ENSORLG00015023012	pus1	81	70.159	Oryzias_latipes_hsok
ENSGAGG00000016730	-	90	69.937	ENSOMEG00000022655	pus1	77	68.196	Oryzias_melastigma
ENSGAGG00000016730	-	94	78.248	ENSOGAG00000008720	PUS1	86	78.550	Otolemur_garnettii
ENSGAGG00000016730	-	94	79.518	ENSOARG00000013316	PUS1	76	79.518	Ovis_aries
ENSGAGG00000016730	-	94	78.313	ENSPPAG00000040971	PUS1	90	77.083	Pan_paniscus
ENSGAGG00000016730	-	91	79.560	ENSPPRG00000015456	PUS1	81	79.560	Panthera_pardus
ENSGAGG00000016730	-	87	81.908	ENSPTIG00000004201	PUS1	80	81.759	Panthera_tigris_altaica
ENSGAGG00000016730	-	94	78.313	ENSPTRG00000005643	PUS1	90	77.381	Pan_troglodytes
ENSGAGG00000016730	-	99	75.000	ENSPANG00000000376	PUS1	95	75.000	Papio_anubis
ENSGAGG00000016730	-	90	74.121	ENSPKIG00000019369	pus1	74	72.086	Paramormyrops_kingsleyae
ENSGAGG00000016730	-	90	92.357	ENSPSIG00000016432	PUS1	78	89.790	Pelodiscus_sinensis
ENSGAGG00000016730	-	91	68.770	ENSPMGG00000004522	pus1	92	67.901	Periophthalmus_magnuspinnatus
ENSGAGG00000016730	-	94	76.292	ENSPEMG00000013448	Pus1	81	74.910	Peromyscus_maniculatus_bairdii
ENSGAGG00000016730	-	88	56.536	ENSPMAG00000004636	pus1	93	56.536	Petromyzon_marinus
ENSGAGG00000016730	-	77	81.273	ENSPCIG00000022609	-	67	79.137	Phascolarctos_cinereus
ENSGAGG00000016730	-	94	68.085	ENSPFOG00000019669	pus1	79	68.085	Poecilia_formosa
ENSGAGG00000016730	-	94	68.085	ENSPLAG00000002692	-	79	68.085	Poecilia_latipinna
ENSGAGG00000016730	-	94	68.085	ENSPLAG00000007185	pus1	79	68.085	Poecilia_latipinna
ENSGAGG00000016730	-	94	68.085	ENSPMEG00000006038	pus1	82	68.085	Poecilia_mexicana
ENSGAGG00000016730	-	94	68.085	ENSPMEG00000011115	PUS1	79	68.085	Poecilia_mexicana
ENSGAGG00000016730	-	90	69.745	ENSPREG00000007231	pus1	87	69.745	Poecilia_reticulata
ENSGAGG00000016730	-	94	77.711	ENSPPYG00000005132	PUS1	78	77.711	Pongo_abelii
ENSGAGG00000016730	-	76	69.434	ENSPCAG00000009110	-	65	69.434	Procavia_capensis
ENSGAGG00000016730	-	94	68.882	ENSPCOG00000015595	PUS1	81	69.184	Propithecus_coquereli
ENSGAGG00000016730	-	94	69.605	ENSPNYG00000013571	pus1	78	69.605	Pundamilia_nyererei
ENSGAGG00000016730	-	93	70.186	ENSPNAG00000003938	pus1	76	70.186	Pygocentrus_nattereri
ENSGAGG00000016730	-	94	75.904	ENSRNOG00000037500	Pus1	83	72.365	Rattus_norvegicus
ENSGAGG00000016730	-	99	75.358	ENSRBIG00000043177	PUS1	96	75.358	Rhinopithecus_bieti
ENSGAGG00000016730	-	94	77.108	ENSRROG00000039744	PUS1	89	76.393	Rhinopithecus_roxellana
ENSGAGG00000016730	-	84	42.574	YPL212C	-	57	42.574	Saccharomyces_cerevisiae
ENSGAGG00000016730	-	94	77.204	ENSSBOG00000023593	PUS1	93	77.709	Saimiri_boliviensis_boliviensis
ENSGAGG00000016730	-	94	80.363	ENSSHAG00000013193	PUS1	78	83.019	Sarcophilus_harrisii
ENSGAGG00000016730	-	90	76.038	ENSSFOG00015003463	pus1	74	74.233	Scleropages_formosus
ENSGAGG00000016730	-	94	68.196	ENSSMAG00000019075	pus1	78	68.196	Scophthalmus_maximus
ENSGAGG00000016730	-	94	68.997	ENSSDUG00000007102	pus1	78	68.997	Seriola_dumerili
ENSGAGG00000016730	-	94	69.301	ENSSLDG00000022850	pus1	78	69.301	Seriola_lalandi_dorsalis
ENSGAGG00000016730	-	87	70.199	ENSSARG00000008367	PUS1	98	70.199	Sorex_araneus
ENSGAGG00000016730	-	94	82.883	ENSSPUG00000010009	PUS1	83	82.883	Sphenodon_punctatus
ENSGAGG00000016730	-	94	66.869	ENSSPAG00000006272	pus1	84	66.869	Stegastes_partitus
ENSGAGG00000016730	-	94	80.120	ENSSSCG00000009741	PUS1	83	80.120	Sus_scrofa
ENSGAGG00000016730	-	88	86.319	ENSTGUG00000008068	PUS1	93	86.319	Taeniopygia_guttata
ENSGAGG00000016730	-	92	68.731	ENSTRUG00000002198	pus1	80	69.968	Takifugu_rubripes
ENSGAGG00000016730	-	92	67.802	ENSTNIG00000003942	pus1	79	69.677	Tetraodon_nigroviridis
ENSGAGG00000016730	-	94	79.635	ENSTTRG00000000632	PUS1	78	79.635	Tursiops_truncatus
ENSGAGG00000016730	-	90	82.372	ENSUAMG00000017197	PUS1	79	82.581	Ursus_americanus
ENSGAGG00000016730	-	93	80.000	ENSUMAG00000002831	PUS1	94	82.372	Ursus_maritimus
ENSGAGG00000016730	-	88	82.736	ENSVVUG00000004199	PUS1	70	82.736	Vulpes_vulpes
ENSGAGG00000016730	-	90	79.553	ENSXETG00000002030	pus1	79	78.683	Xenopus_tropicalis
ENSGAGG00000016730	-	87	47.039	ENSXETG00000033640	-	95	47.039	Xenopus_tropicalis
ENSGAGG00000016730	-	94	69.207	ENSXCOG00000004722	pus1	85	69.207	Xiphophorus_couchianus
ENSGAGG00000016730	-	94	69.301	ENSXMAG00000000988	pus1	79	69.301	Xiphophorus_maculatus