EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000016999 (Gene tree)
Gene ID: -
Gene Symbol: RNF17
Alias: FLJ11045|Mmip-2|SPATA23|TDRD4
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 190905 bases
Position: chrPPEB01003090.1:12797-203701
Accession: 10060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000023192	TUDOR	PF00567.24	7.9e-69	1	4
ENSGAGP00000023192	TUDOR	PF00567.24	7.9e-69	2	4
ENSGAGP00000023192	TUDOR	PF00567.24	7.9e-69	3	4
ENSGAGP00000023192	TUDOR	PF00567.24	7.9e-69	4	4
ENSGAGP00000023188	TUDOR	PF00567.24	4.9e-68	1	4
ENSGAGP00000023188	TUDOR	PF00567.24	4.9e-68	2	4
ENSGAGP00000023188	TUDOR	PF00567.24	4.9e-68	3	4
ENSGAGP00000023188	TUDOR	PF00567.24	4.9e-68	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000026427	RNF17-202	4675	-	ENSGAGP00000023192	1517 (aa)	-	-
ENSGAGT00000026422	RNF17-201	5046	-	ENSGAGP00000023188	1588 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000016999's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000016999's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000016999	RNF17	92	55.725	ENSG00000132972	RNF17	99	59.236	Homo_sapiens
ENSGAGG00000016999	RNF17	87	31.933	ENSAPOG00000017034	rnf17	91	31.713	Acanthochromis_polyacanthus
ENSGAGG00000016999	RNF17	92	57.070	ENSAMEG00000017340	RNF17	93	56.708	Ailuropoda_melanoleuca
ENSGAGG00000016999	RNF17	91	32.750	ENSAOCG00000018283	rnf17	91	32.612	Amphiprion_ocellaris
ENSGAGG00000016999	RNF17	81	32.824	ENSAPEG00000022338	rnf17	92	33.146	Amphiprion_percula
ENSGAGG00000016999	RNF17	89	33.164	ENSATEG00000002067	rnf17	93	33.309	Anabas_testudineus
ENSGAGG00000016999	RNF17	86	56.269	ENSAPLG00000003969	RNF17	98	56.269	Anas_platyrhynchos
ENSGAGG00000016999	RNF17	95	49.485	ENSACAG00000001418	RNF17	94	49.347	Anolis_carolinensis
ENSGAGG00000016999	RNF17	90	47.798	ENSANAG00000029969	RNF17	95	47.581	Aotus_nancymaae
ENSGAGG00000016999	RNF17	91	30.239	ENSACLG00000018279	rnf17	93	30.619	Astatotilapia_calliptera
ENSGAGG00000016999	RNF17	70	33.210	ENSAMXG00000011002	rnf17	79	33.364	Astyanax_mexicanus
ENSGAGG00000016999	RNF17	90	55.515	ENSCJAG00000018937	RNF17	87	55.225	Callithrix_jacchus
ENSGAGG00000016999	RNF17	93	57.558	ENSCAFG00000007418	RNF17	96	59.030	Canis_familiaris
ENSGAGG00000016999	RNF17	86	56.969	ENSCHIG00000026716	RNF17	89	58.873	Capra_hircus
ENSGAGG00000016999	RNF17	91	54.769	ENSTSYG00000000365	RNF17	96	54.729	Carlito_syrichta
ENSGAGG00000016999	RNF17	80	49.262	ENSCAPG00000012908	RNF17	91	49.262	Cavia_aperea
ENSGAGG00000016999	RNF17	90	55.757	ENSCCAG00000026725	RNF17	87	55.612	Cebus_capucinus
ENSGAGG00000016999	RNF17	90	55.974	ENSCATG00000040352	RNF17	87	56.700	Cercocebus_atys
ENSGAGG00000016999	RNF17	97	53.324	ENSCLAG00000004127	RNF17	95	52.981	Chinchilla_lanigera
ENSGAGG00000016999	RNF17	90	55.902	ENSCSAG00000018019	RNF17	87	55.612	Chlorocebus_sabaeus
ENSGAGG00000016999	RNF17	80	56.383	ENSCHOG00000013310	RNF17	83	56.383	Choloepus_hoffmanni
ENSGAGG00000016999	RNF17	92	91.242	ENSCPBG00000020920	RNF17	97	91.242	Chrysemys_picta_bellii
ENSGAGG00000016999	RNF17	91	55.829	ENSCANG00000032927	RNF17	92	55.539	Colobus_angolensis_palliatus
ENSGAGG00000016999	RNF17	97	50.479	ENSCGRG00001022658	Rnf17	94	50.673	Cricetulus_griseus_chok1gshd
ENSGAGG00000016999	RNF17	97	50.479	ENSCGRG00000009924	Rnf17	94	50.673	Cricetulus_griseus_crigri
ENSGAGG00000016999	RNF17	70	32.060	ENSCVAG00000017008	rnf17	79	32.060	Cyprinodon_variegatus
ENSGAGG00000016999	RNF17	90	57.485	ENSDNOG00000006115	RNF17	87	57.122	Dasypus_novemcinctus
ENSGAGG00000016999	RNF17	59	59.813	ENSETEG00000017874	-	57	59.813	Echinops_telfairi
ENSGAGG00000016999	RNF17	92	58.643	ENSECAG00000017152	RNF17	93	58.279	Equus_caballus
ENSGAGG00000016999	RNF17	83	48.173	ENSEEUG00000000332	RNF17	87	48.173	Erinaceus_europaeus
ENSGAGG00000016999	RNF17	71	35.150	ENSELUG00000005626	rnf17	92	31.642	Esox_lucius
ENSGAGG00000016999	RNF17	96	53.861	ENSFCAG00000004914	RNF17	93	57.403	Felis_catus
ENSGAGG00000016999	RNF17	93	49.083	ENSFALG00000008766	RNF17	90	48.211	Ficedula_albicollis
ENSGAGG00000016999	RNF17	97	51.202	ENSFDAG00000017857	RNF17	95	50.935	Fukomys_damarensis
ENSGAGG00000016999	RNF17	91	30.878	ENSFHEG00000014822	rnf17	92	31.193	Fundulus_heteroclitus
ENSGAGG00000016999	RNF17	66	32.718	ENSGAFG00000004463	rnf17	76	32.883	Gambusia_affinis
ENSGAGG00000016999	RNF17	50	37.023	ENSGACG00000001340	-	100	37.023	Gasterosteus_aculeatus
ENSGAGG00000016999	RNF17	90	55.596	ENSGGOG00000014491	RNF17	92	57.992	Gorilla_gorilla
ENSGAGG00000016999	RNF17	91	30.239	ENSHBUG00000003554	rnf17	93	30.881	Haplochromis_burtoni
ENSGAGG00000016999	RNF17	90	53.863	ENSHGLG00000007270	RNF17	88	53.502	Heterocephalus_glaber_female
ENSGAGG00000016999	RNF17	90	53.935	ENSHGLG00100017393	RNF17	88	53.574	Heterocephalus_glaber_male
ENSGAGG00000016999	RNF17	59	33.702	ENSHCOG00000017676	rnf17	68	33.702	Hippocampus_comes
ENSGAGG00000016999	RNF17	70	35.614	ENSIPUG00000001087	rnf17	69	35.614	Ictalurus_punctatus
ENSGAGG00000016999	RNF17	97	51.892	ENSJJAG00000016584	Rnf17	94	51.572	Jaculus_jaculus
ENSGAGG00000016999	RNF17	90	30.288	ENSKMAG00000013403	rnf17	91	30.520	Kryptolebias_marmoratus
ENSGAGG00000016999	RNF17	86	31.711	ENSLBEG00000014910	rnf17	89	31.711	Labrus_bergylta
ENSGAGG00000016999	RNF17	76	49.831	ENSLACG00000000323	RNF17	99	49.831	Latimeria_chalumnae
ENSGAGG00000016999	RNF17	70	33.027	ENSLOCG00000010768	rnf17	70	33.027	Lepisosteus_oculatus
ENSGAGG00000016999	RNF17	90	56.046	ENSMFAG00000032388	RNF17	87	55.757	Macaca_fascicularis
ENSGAGG00000016999	RNF17	90	56.792	ENSMMUG00000014610	RNF17	86	58.759	Macaca_mulatta
ENSGAGG00000016999	RNF17	90	56.046	ENSMNEG00000011234	RNF17	86	58.759	Macaca_nemestrina
ENSGAGG00000016999	RNF17	90	55.467	ENSMLEG00000030227	RNF17	86	56.569	Mandrillus_leucophaeus
ENSGAGG00000016999	RNF17	67	33.171	ENSMAMG00000020403	rnf17	75	33.171	Mastacembelus_armatus
ENSGAGG00000016999	RNF17	91	30.309	ENSMZEG00005019166	rnf17	93	30.689	Maylandia_zebra
ENSGAGG00000016999	RNF17	73	54.230	ENSMGAG00000015138	RNF17	98	54.230	Meleagris_gallopavo
ENSGAGG00000016999	RNF17	89	53.202	ENSMAUG00000004788	Rnf17	87	53.216	Mesocricetus_auratus
ENSGAGG00000016999	RNF17	98	52.545	ENSMICG00000010364	RNF17	95	52.545	Microcebus_murinus
ENSGAGG00000016999	RNF17	60	56.224	ENSMOCG00000011818	-	92	56.224	Microtus_ochrogaster
ENSGAGG00000016999	RNF17	62	34.167	ENSMMOG00000019514	rnf17	71	34.167	Mola_mola
ENSGAGG00000016999	RNF17	90	62.391	ENSMODG00000007827	RNF17	87	62.029	Monodelphis_domestica
ENSGAGG00000016999	RNF17	70	35.055	ENSMALG00000016943	rnf17	97	31.023	Monopterus_albus
ENSGAGG00000016999	RNF17	91	55.409	MGP_CAROLIEiJ_G0019337	Rnf17	92	55.044	Mus_caroli
ENSGAGG00000016999	RNF17	90	54.931	ENSMUSG00000000365	Rnf17	92	54.638	Mus_musculus
ENSGAGG00000016999	RNF17	91	55.112	MGP_PahariEiJ_G0030355	Rnf17	92	54.750	Mus_pahari
ENSGAGG00000016999	RNF17	90	55.004	MGP_SPRETEiJ_G0020228	Rnf17	92	54.711	Mus_spretus
ENSGAGG00000016999	RNF17	92	57.956	ENSMPUG00000013305	RNF17	94	57.591	Mustela_putorius_furo
ENSGAGG00000016999	RNF17	93	57.246	ENSMLUG00000003903	RNF17	94	56.884	Myotis_lucifugus
ENSGAGG00000016999	RNF17	93	55.333	ENSNGAG00000013553	Rnf17	95	55.047	Nannospalax_galili
ENSGAGG00000016999	RNF17	70	34.146	ENSNBRG00000012006	rnf17	86	34.146	Neolamprologus_brichardi
ENSGAGG00000016999	RNF17	90	55.515	ENSNLEG00000013780	RNF17	88	58.151	Nomascus_leucogenys
ENSGAGG00000016999	RNF17	58	74.775	ENSMEUG00000003276	-	52	74.775	Notamacropus_eugenii
ENSGAGG00000016999	RNF17	79	62.500	ENSOPRG00000016743	-	72	62.500	Ochotona_princeps
ENSGAGG00000016999	RNF17	90	31.017	ENSONIG00000015746	rnf17	99	33.942	Oreochromis_niloticus
ENSGAGG00000016999	RNF17	94	56.323	ENSOCUG00000007384	RNF17	93	57.796	Oryctolagus_cuniculus
ENSGAGG00000016999	RNF17	70	34.043	ENSORLG00000012818	rnf17	95	31.418	Oryzias_latipes
ENSGAGG00000016999	RNF17	70	33.950	ENSORLG00020009879	-	90	30.913	Oryzias_latipes_hni
ENSGAGG00000016999	RNF17	90	30.057	ENSORLG00015013027	-	91	30.389	Oryzias_latipes_hsok
ENSGAGG00000016999	RNF17	70	32.962	ENSOMEG00000009891	rnf17	83	32.994	Oryzias_melastigma
ENSGAGG00000016999	RNF17	98	51.496	ENSOGAG00000014803	RNF17	95	51.496	Otolemur_garnettii
ENSGAGG00000016999	RNF17	90	57.631	ENSOARG00000014641	RNF17	93	57.340	Ovis_aries
ENSGAGG00000016999	RNF17	80	58.305	ENSPPAG00000028779	RNF17	88	57.970	Pan_paniscus
ENSGAGG00000016999	RNF17	96	56.081	ENSPPRG00000009230	RNF17	95	55.664	Panthera_pardus
ENSGAGG00000016999	RNF17	92	57.768	ENSPTIG00000001738	RNF17	93	57.330	Panthera_tigris_altaica
ENSGAGG00000016999	RNF17	90	55.644	ENSPTRG00000005713	RNF17	88	57.970	Pan_troglodytes
ENSGAGG00000016999	RNF17	90	55.916	ENSPANG00000007640	RNF17	89	58.676	Papio_anubis
ENSGAGG00000016999	RNF17	73	35.320	ENSPKIG00000001648	rnf17	91	35.320	Paramormyrops_kingsleyae
ENSGAGG00000016999	RNF17	70	84.716	ENSPSIG00000011245	RNF17	94	84.716	Pelodiscus_sinensis
ENSGAGG00000016999	RNF17	90	55.072	ENSPEMG00000008693	Rnf17	88	54.710	Peromyscus_maniculatus_bairdii
ENSGAGG00000016999	RNF17	62	64.920	ENSPCIG00000009190	-	93	65.670	Phascolarctos_cinereus
ENSGAGG00000016999	RNF17	90	30.538	ENSPFOG00000007124	rnf17	91	30.438	Poecilia_formosa
ENSGAGG00000016999	RNF17	90	30.419	ENSPLAG00000006198	rnf17	91	30.463	Poecilia_latipinna
ENSGAGG00000016999	RNF17	90	30.491	ENSPMEG00000022432	rnf17	94	30.670	Poecilia_mexicana
ENSGAGG00000016999	RNF17	65	33.962	ENSPREG00000001414	rnf17	72	34.402	Poecilia_reticulata
ENSGAGG00000016999	RNF17	90	55.507	ENSPPYG00000005215	RNF17	87	55.217	Pongo_abelii
ENSGAGG00000016999	RNF17	62	60.526	ENSPCAG00000002665	RNF17	66	60.526	Procavia_capensis
ENSGAGG00000016999	RNF17	80	48.578	ENSPCOG00000020211	RNF17	77	48.578	Propithecus_coquereli
ENSGAGG00000016999	RNF17	86	53.387	ENSPVAG00000013021	RNF17	86	53.168	Pteropus_vampyrus
ENSGAGG00000016999	RNF17	70	34.762	ENSPNAG00000027505	rnf17	75	34.698	Pygocentrus_nattereri
ENSGAGG00000016999	RNF17	91	55.402	ENSRNOG00000008059	Rnf17	92	55.040	Rattus_norvegicus
ENSGAGG00000016999	RNF17	91	54.895	ENSRBIG00000027010	RNF17	92	54.480	Rhinopithecus_bieti
ENSGAGG00000016999	RNF17	91	55.539	ENSRROG00000022801	RNF17	92	55.250	Rhinopithecus_roxellana
ENSGAGG00000016999	RNF17	90	55.628	ENSSBOG00000021661	RNF17	87	55.339	Saimiri_boliviensis_boliviensis
ENSGAGG00000016999	RNF17	92	62.464	ENSSHAG00000005609	RNF17	93	61.957	Sarcophilus_harrisii
ENSGAGG00000016999	RNF17	62	37.253	ENSSFOG00015023037	rnf17	86	37.253	Scleropages_formosus
ENSGAGG00000016999	RNF17	73	33.130	ENSSMAG00000007429	rnf17	76	33.130	Scophthalmus_maximus
ENSGAGG00000016999	RNF17	90	31.263	ENSSDUG00000013530	rnf17	94	31.546	Seriola_dumerili
ENSGAGG00000016999	RNF17	90	31.605	ENSSLDG00000019577	rnf17	91	31.841	Seriola_lalandi_dorsalis
ENSGAGG00000016999	RNF17	82	62.658	ENSSARG00000003016	RNF17	74	62.658	Sorex_araneus
ENSGAGG00000016999	RNF17	78	65.261	ENSSPUG00000008917	RNF17	82	65.261	Sphenodon_punctatus
ENSGAGG00000016999	RNF17	90	32.115	ENSSPAG00000001925	rnf17	95	32.143	Stegastes_partitus
ENSGAGG00000016999	RNF17	89	56.412	ENSSSCG00000009572	RNF17	93	55.547	Sus_scrofa
ENSGAGG00000016999	RNF17	73	32.461	ENSTRUG00000015498	rnf17	77	32.461	Takifugu_rubripes
ENSGAGG00000016999	RNF17	70	32.621	ENSTNIG00000015681	rnf17	94	32.714	Tetraodon_nigroviridis
ENSGAGG00000016999	RNF17	82	49.523	ENSTBEG00000000282	RNF17	84	49.523	Tupaia_belangeri
ENSGAGG00000016999	RNF17	89	52.047	ENSTTRG00000012698	RNF17	90	51.453	Tursiops_truncatus
ENSGAGG00000016999	RNF17	76	66.783	ENSVPAG00000011388	RNF17	75	66.553	Vicugna_pacos
ENSGAGG00000016999	RNF17	92	57.810	ENSVVUG00000006226	RNF17	93	61.395	Vulpes_vulpes
ENSGAGG00000016999	RNF17	67	41.068	ENSXETG00000034020	RNF17	98	40.949	Xenopus_tropicalis
ENSGAGG00000016999	RNF17	90	30.829	ENSXCOG00000018295	rnf17	93	30.676	Xiphophorus_couchianus
ENSGAGG00000016999	RNF17	90	31.076	ENSXMAG00000014747	rnf17	93	31.089	Xiphophorus_maculatus