EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000017209 (Gene tree)
Gene ID: -
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 122795 bases
Position: chrPPEB01001658.1:133934-256728
Accession: 24704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000023472	La	PF05383.17	5.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000026754	LARP1B-201	4683	-	ENSGAGP00000023472	1053 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000017209's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000017209's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000017209	LARP1B	89	62.578	ENSGAGG00000025113	LARP1	91	66.387

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000017209	LARP1B	93	73.373	ENSG00000138709	LARP1B	96	79.167	Homo_sapiens
ENSGAGG00000017209	LARP1B	89	57.684	ENSAPOG00000020101	larp1b	89	55.466	Acanthochromis_polyacanthus
ENSGAGG00000017209	LARP1B	52	77.477	ENSAMEG00000002748	LARP1B	99	77.477	Ailuropoda_melanoleuca
ENSGAGG00000017209	LARP1B	89	55.036	ENSACIG00000023890	larp1b	90	53.327	Amphilophus_citrinellus
ENSGAGG00000017209	LARP1B	87	53.838	ENSAOCG00000014268	larp1b	96	53.269	Amphiprion_ocellaris
ENSGAGG00000017209	LARP1B	94	55.348	ENSAPEG00000004126	larp1b	93	54.267	Amphiprion_percula
ENSGAGG00000017209	LARP1B	91	56.570	ENSATEG00000017849	larp1b	90	56.570	Anabas_testudineus
ENSGAGG00000017209	LARP1B	84	76.227	ENSAPLG00000010129	LARP1B	100	75.655	Anas_platyrhynchos
ENSGAGG00000017209	LARP1B	85	81.093	ENSACAG00000011338	LARP1B	94	80.656	Anolis_carolinensis
ENSGAGG00000017209	LARP1B	85	62.050	ENSANAG00000034618	LARP1B	96	67.976	Aotus_nancymaae
ENSGAGG00000017209	LARP1B	89	56.078	ENSACLG00000011948	larp1b	91	54.350	Astatotilapia_calliptera
ENSGAGG00000017209	LARP1B	71	53.409	ENSAMXG00000006805	larp1b	71	58.302	Astyanax_mexicanus
ENSGAGG00000017209	LARP1B	92	75.560	ENSBTAG00000012135	LARP1B	98	75.097	Bos_taurus
ENSGAGG00000017209	LARP1B	84	78.163	ENSCJAG00000003338	LARP1B	99	79.715	Callithrix_jacchus
ENSGAGG00000017209	LARP1B	87	78.896	ENSCAFG00000003831	LARP1B	100	78.463	Canis_familiaris
ENSGAGG00000017209	LARP1B	87	77.885	ENSCAFG00020018899	LARP1B	100	77.457	Canis_lupus_dingo
ENSGAGG00000017209	LARP1B	87	76.017	ENSCHIG00000023144	LARP1B	100	75.589	Capra_hircus
ENSGAGG00000017209	LARP1B	85	76.688	ENSCCAG00000021948	LARP1B	99	76.471	Cebus_capucinus
ENSGAGG00000017209	LARP1B	85	76.419	ENSCATG00000013541	LARP1B	99	76.201	Cercocebus_atys
ENSGAGG00000017209	LARP1B	85	77.149	ENSCSAG00000003582	LARP1B	99	76.931	Chlorocebus_sabaeus
ENSGAGG00000017209	LARP1B	85	70.033	ENSCHOG00000005354	LARP1B	100	69.055	Choloepus_hoffmanni
ENSGAGG00000017209	LARP1B	99	95.905	ENSCPBG00000017480	LARP1B	100	95.905	Chrysemys_picta_bellii
ENSGAGG00000017209	LARP1B	85	73.326	ENSCANG00000026958	LARP1B	99	73.427	Colobus_angolensis_palliatus
ENSGAGG00000017209	LARP1B	88	54.370	ENSCSEG00000013519	larp1b	93	52.807	Cynoglossus_semilaevis
ENSGAGG00000017209	LARP1B	90	55.355	ENSCVAG00000005046	larp1b	88	55.589	Cyprinodon_variegatus
ENSGAGG00000017209	LARP1B	92	53.816	ENSDARG00000061169	larp1b	86	55.104	Danio_rerio
ENSGAGG00000017209	LARP1B	75	70.301	ENSETEG00000012497	LARP1B	89	70.732	Echinops_telfairi
ENSGAGG00000017209	LARP1B	89	49.950	ENSEBUG00000003668	larp1b	95	49.251	Eptatretus_burgeri
ENSGAGG00000017209	LARP1B	87	76.073	ENSEASG00005018106	LARP1B	98	77.951	Equus_asinus_asinus
ENSGAGG00000017209	LARP1B	92	75.512	ENSECAG00000001088	LARP1B	91	73.235	Equus_caballus
ENSGAGG00000017209	LARP1B	68	45.718	ENSELUG00000023774	larp1b	69	56.714	Esox_lucius
ENSGAGG00000017209	LARP1B	87	74.011	ENSFALG00000008098	LARP1B	100	74.011	Ficedula_albicollis
ENSGAGG00000017209	LARP1B	89	57.039	ENSFHEG00000010264	larp1b	85	56.028	Fundulus_heteroclitus
ENSGAGG00000017209	LARP1B	75	69.373	ENSGMOG00000005207	larp1b	77	69.742	Gadus_morhua
ENSGAGG00000017209	LARP1B	99	70.633	ENSGALG00000010207	LARP1B	99	70.633	Gallus_gallus
ENSGAGG00000017209	LARP1B	74	63.347	ENSGAFG00000012012	larp1b	91	60.361	Gambusia_affinis
ENSGAGG00000017209	LARP1B	91	52.490	ENSGACG00000004609	larp1b	88	55.036	Gasterosteus_aculeatus
ENSGAGG00000017209	LARP1B	85	76.445	ENSGGOG00000015900	LARP1B	99	76.227	Gorilla_gorilla
ENSGAGG00000017209	LARP1B	89	56.090	ENSHBUG00000009730	larp1b	90	54.427	Haplochromis_burtoni
ENSGAGG00000017209	LARP1B	64	62.229	ENSHCOG00000000918	larp1b	99	60.924	Hippocampus_comes
ENSGAGG00000017209	LARP1B	93	54.195	ENSIPUG00000012138	larp1b	89	55.828	Ictalurus_punctatus
ENSGAGG00000017209	LARP1B	93	53.198	ENSKMAG00000011589	larp1b	91	54.702	Kryptolebias_marmoratus
ENSGAGG00000017209	LARP1B	89	56.904	ENSLBEG00000005655	larp1b	88	56.394	Labrus_bergylta
ENSGAGG00000017209	LARP1B	92	72.393	ENSLACG00000015247	LARP1B	99	74.169	Latimeria_chalumnae
ENSGAGG00000017209	LARP1B	87	66.216	ENSLOCG00000010684	larp1b	96	67.360	Lepisosteus_oculatus
ENSGAGG00000017209	LARP1B	85	77.620	ENSMFAG00000002218	LARP1B	99	77.402	Macaca_fascicularis
ENSGAGG00000017209	LARP1B	85	77.620	ENSMMUG00000021347	LARP1B	99	77.402	Macaca_mulatta
ENSGAGG00000017209	LARP1B	80	75.472	ENSMNEG00000030406	LARP1B	99	75.202	Macaca_nemestrina
ENSGAGG00000017209	LARP1B	85	75.000	ENSMLEG00000009306	LARP1B	99	75.000	Mandrillus_leucophaeus
ENSGAGG00000017209	LARP1B	89	57.447	ENSMAMG00000000081	larp1b	90	57.143	Mastacembelus_armatus
ENSGAGG00000017209	LARP1B	66	62.890	ENSMZEG00005002545	larp1b	98	60.941	Maylandia_zebra
ENSGAGG00000017209	LARP1B	84	66.882	ENSMGAG00000004809	LARP1B	100	67.028	Meleagris_gallopavo
ENSGAGG00000017209	LARP1B	85	79.978	ENSMICG00000036111	LARP1B	100	79.648	Microcebus_murinus
ENSGAGG00000017209	LARP1B	93	78.286	ENSMODG00000012300	LARP1B	91	77.928	Monodelphis_domestica
ENSGAGG00000017209	LARP1B	89	57.113	ENSMALG00000003638	larp1b	88	56.531	Monopterus_albus
ENSGAGG00000017209	LARP1B	89	78.270	ENSMPUG00000017365	LARP1B	88	76.316	Mustela_putorius_furo
ENSGAGG00000017209	LARP1B	85	75.162	ENSMLUG00000010229	LARP1B	99	74.784	Myotis_lucifugus
ENSGAGG00000017209	LARP1B	74	58.357	ENSNBRG00000023846	larp1b	87	56.489	Neolamprologus_brichardi
ENSGAGG00000017209	LARP1B	85	76.362	ENSNLEG00000013819	LARP1B	99	76.144	Nomascus_leucogenys
ENSGAGG00000017209	LARP1B	74	78.623	ENSMEUG00000010308	LARP1B	88	78.192	Notamacropus_eugenii
ENSGAGG00000017209	LARP1B	78	67.458	ENSOPRG00000005478	LARP1B	91	67.458	Ochotona_princeps
ENSGAGG00000017209	LARP1B	89	56.983	ENSONIG00000012386	larp1b	99	55.861	Oreochromis_niloticus
ENSGAGG00000017209	LARP1B	87	76.515	ENSOCUG00000013330	LARP1B	100	76.299	Oryctolagus_cuniculus
ENSGAGG00000017209	LARP1B	89	54.397	ENSORLG00000017954	larp1b	87	54.802	Oryzias_latipes
ENSGAGG00000017209	LARP1B	89	54.490	ENSORLG00020013081	larp1b	87	54.388	Oryzias_latipes_hni
ENSGAGG00000017209	LARP1B	89	55.430	ENSORLG00015009580	larp1b	87	55.544	Oryzias_latipes_hsok
ENSGAGG00000017209	LARP1B	89	55.123	ENSOMEG00000004210	larp1b	87	55.266	Oryzias_melastigma
ENSGAGG00000017209	LARP1B	83	78.628	ENSOGAG00000005771	LARP1B	100	77.278	Otolemur_garnettii
ENSGAGG00000017209	LARP1B	85	76.253	ENSOARG00000015300	LARP1B	99	75.817	Ovis_aries
ENSGAGG00000017209	LARP1B	85	76.445	ENSPPAG00000030439	LARP1B	99	76.227	Pan_paniscus
ENSGAGG00000017209	LARP1B	85	76.227	ENSPTRG00000016437	LARP1B	99	76.009	Pan_troglodytes
ENSGAGG00000017209	LARP1B	85	77.620	ENSPANG00000012488	LARP1B	99	77.402	Papio_anubis
ENSGAGG00000017209	LARP1B	89	51.001	ENSPKIG00000014360	larp1b	97	50.157	Paramormyrops_kingsleyae
ENSGAGG00000017209	LARP1B	88	91.290	ENSPSIG00000012885	LARP1B	99	90.645	Pelodiscus_sinensis
ENSGAGG00000017209	LARP1B	64	63.596	ENSPMGG00000007207	larp1b	81	62.958	Periophthalmus_magnuspinnatus
ENSGAGG00000017209	LARP1B	62	60.086	ENSPMAG00000002700	larp1b	99	53.423	Petromyzon_marinus
ENSGAGG00000017209	LARP1B	88	81.144	ENSPCIG00000026516	LARP1B	100	84.280	Phascolarctos_cinereus
ENSGAGG00000017209	LARP1B	89	55.876	ENSPFOG00000019519	larp1b	88	56.275	Poecilia_formosa
ENSGAGG00000017209	LARP1B	55	49.592	ENSPFOG00000022837	-	87	49.755	Poecilia_formosa
ENSGAGG00000017209	LARP1B	89	57.041	ENSPLAG00000007115	larp1b	87	57.347	Poecilia_latipinna
ENSGAGG00000017209	LARP1B	89	57.233	ENSPMEG00000001224	larp1b	87	57.442	Poecilia_mexicana
ENSGAGG00000017209	LARP1B	85	74.102	ENSPCAG00000007546	LARP1B	99	73.885	Procavia_capensis
ENSGAGG00000017209	LARP1B	76	77.563	ENSPCOG00000021874	LARP1B	100	77.463	Propithecus_coquereli
ENSGAGG00000017209	LARP1B	85	73.597	ENSPVAG00000005373	LARP1B	100	73.267	Pteropus_vampyrus
ENSGAGG00000017209	LARP1B	66	62.764	ENSPNYG00000017357	larp1b	98	60.203	Pundamilia_nyererei
ENSGAGG00000017209	LARP1B	88	54.696	ENSPNAG00000008823	larp1b	82	58.104	Pygocentrus_nattereri
ENSGAGG00000017209	LARP1B	85	77.620	ENSRROG00000030771	LARP1B	99	77.402	Rhinopithecus_roxellana
ENSGAGG00000017209	LARP1B	62	82.615	ENSSHAG00000014474	LARP1B	99	82.388	Sarcophilus_harrisii
ENSGAGG00000017209	LARP1B	85	56.197	ENSSMAG00000006347	larp1b	93	55.661	Scophthalmus_maximus
ENSGAGG00000017209	LARP1B	89	57.521	ENSSDUG00000004182	larp1b	87	56.224	Seriola_dumerili
ENSGAGG00000017209	LARP1B	67	61.669	ENSSLDG00000014613	larp1b	70	60.056	Seriola_lalandi_dorsalis
ENSGAGG00000017209	LARP1B	84	74.128	ENSSPUG00000011837	LARP1B	98	72.229	Sphenodon_punctatus
ENSGAGG00000017209	LARP1B	96	53.069	ENSSPAG00000017772	larp1b	93	53.684	Stegastes_partitus
ENSGAGG00000017209	LARP1B	94	73.532	ENSSSCG00000034280	LARP1B	99	89.583	Sus_scrofa
ENSGAGG00000017209	LARP1B	80	75.410	ENSTGUG00000002098	-	100	69.341	Taeniopygia_guttata
ENSGAGG00000017209	LARP1B	89	56.237	ENSTRUG00000005612	larp1b	87	55.763	Takifugu_rubripes
ENSGAGG00000017209	LARP1B	89	54.995	ENSTNIG00000012398	larp1b	99	54.711	Tetraodon_nigroviridis
ENSGAGG00000017209	LARP1B	71	68.168	ENSTBEG00000004177	LARP1B	88	66.236	Tupaia_belangeri
ENSGAGG00000017209	LARP1B	79	75.325	ENSTTRG00000012984	LARP1B	92	74.852	Tursiops_truncatus
ENSGAGG00000017209	LARP1B	87	78.873	ENSUMAG00000007373	LARP1B	100	78.440	Ursus_maritimus
ENSGAGG00000017209	LARP1B	85	66.813	ENSVPAG00000007223	LARP1B	100	66.594	Vicugna_pacos
ENSGAGG00000017209	LARP1B	87	78.896	ENSVVUG00000011307	LARP1B	99	79.561	Vulpes_vulpes
ENSGAGG00000017209	LARP1B	88	59.660	ENSXETG00000022512	larp1b	91	60.361	Xenopus_tropicalis
ENSGAGG00000017209	LARP1B	71	57.124	ENSXCOG00000004435	larp1b	75	57.713	Xiphophorus_couchianus
ENSGAGG00000017209	LARP1B	89	56.004	ENSXMAG00000008150	larp1b	87	56.332	Xiphophorus_maculatus