EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000017218 (Gene tree)
Gene ID: -
Gene Symbol: SRRM4
Alias: KIAA1853|nSR100
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 46425 bases
Position: chrPPEB01000161.1:562051-608475
Accession: 29389
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000023482	SRRM_C	PF15230.6	8.1e-28	1	1
ENSGAGP00000023483	SRRM_C	PF15230.6	8.1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000026765	SRRM4-201	1963	-	ENSGAGP00000023482	611 (aa)	-	-
ENSGAGT00000026766	SRRM4-202	1963	-	ENSGAGP00000023483	611 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000017218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000017218's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000017218	SRRM4	82	59.604	ENSG00000139767	SRRM4	79	51.852	Homo_sapiens
ENSGAGG00000017218	SRRM4	81	61.368	ENSAMEG00000016072	SRRM4	65	56.873	Ailuropoda_melanoleuca
ENSGAGG00000017218	SRRM4	90	72.029	ENSAPLG00000009202	SRRM4	86	72.495	Anas_platyrhynchos
ENSGAGG00000017218	SRRM4	76	56.959	ENSACAG00000004139	SRRM4	74	55.000	Anolis_carolinensis
ENSGAGG00000017218	SRRM4	82	59.208	ENSBTAG00000008676	SRRM4	59	55.256	Bos_taurus
ENSGAGG00000017218	SRRM4	82	59.604	ENSCJAG00000009146	SRRM4	58	55.526	Callithrix_jacchus
ENSGAGG00000017218	SRRM4	82	61.630	ENSCAFG00000023113	SRRM4	59	57.412	Canis_familiaris
ENSGAGG00000017218	SRRM4	78	62.422	ENSTSYG00000012239	SRRM4	58	58.841	Carlito_syrichta
ENSGAGG00000017218	SRRM4	76	57.543	ENSCAPG00000008729	SRRM4	63	58.841	Cavia_aperea
ENSGAGG00000017218	SRRM4	82	56.773	ENSCPOG00000003544	SRRM4	59	56.334	Cavia_porcellus
ENSGAGG00000017218	SRRM4	82	59.406	ENSCCAG00000022479	SRRM4	59	56.065	Cebus_capucinus
ENSGAGG00000017218	SRRM4	82	59.010	ENSCATG00000036343	SRRM4	58	54.987	Cercocebus_atys
ENSGAGG00000017218	SRRM4	82	59.880	ENSCLAG00000009764	SRRM4	59	55.795	Chinchilla_lanigera
ENSGAGG00000017218	SRRM4	82	59.208	ENSCSAG00000002300	SRRM4	58	55.256	Chlorocebus_sabaeus
ENSGAGG00000017218	SRRM4	87	89.414	ENSCPBG00000012293	SRRM4	84	93.387	Chrysemys_picta_bellii
ENSGAGG00000017218	SRRM4	82	58.600	ENSDNOG00000000260	SRRM4	60	56.065	Dasypus_novemcinctus
ENSGAGG00000017218	SRRM4	81	59.200	ENSEASG00005008759	SRRM4	59	55.526	Equus_asinus_asinus
ENSGAGG00000017218	SRRM4	81	59.400	ENSECAG00000021729	SRRM4	59	55.795	Equus_caballus
ENSGAGG00000017218	SRRM4	81	61.600	ENSFCAG00000010536	SRRM4	57	57.067	Felis_catus
ENSGAGG00000017218	SRRM4	61	73.854	ENSFALG00000007700	SRRM4	81	74.052	Ficedula_albicollis
ENSGAGG00000017218	SRRM4	81	55.221	ENSFDAG00000007218	SRRM4	58	56.183	Fukomys_damarensis
ENSGAGG00000017218	SRRM4	82	59.604	ENSGGOG00000005338	SRRM4	58	55.795	Gorilla_gorilla
ENSGAGG00000017218	SRRM4	77	60.000	ENSHGLG00000007830	SRRM4	59	55.914	Heterocephalus_glaber_female
ENSGAGG00000017218	SRRM4	82	60.120	ENSLAFG00000003731	SRRM4	59	55.795	Loxodonta_africana
ENSGAGG00000017218	SRRM4	82	59.208	ENSMFAG00000041271	SRRM4	59	54.911	Macaca_fascicularis
ENSGAGG00000017218	SRRM4	83	53.101	ENSMMUG00000021230	SRRM4	59	53.034	Macaca_mulatta
ENSGAGG00000017218	SRRM4	82	59.208	ENSMNEG00000044154	SRRM4	58	55.256	Macaca_nemestrina
ENSGAGG00000017218	SRRM4	82	59.010	ENSMLEG00000034455	SRRM4	58	55.256	Mandrillus_leucophaeus
ENSGAGG00000017218	SRRM4	81	70.221	ENSMGAG00000009082	SRRM4	81	69.246	Meleagris_gallopavo
ENSGAGG00000017218	SRRM4	82	59.604	ENSMICG00000012386	SRRM4	58	56.873	Microcebus_murinus
ENSGAGG00000017218	SRRM4	82	52.571	ENSMODG00000015283	SRRM4	52	54.412	Monodelphis_domestica
ENSGAGG00000017218	SRRM4	60	57.880	ENSMPUG00000002930	SRRM4	59	56.604	Mustela_putorius_furo
ENSGAGG00000017218	SRRM4	82	59.406	ENSNGAG00000020807	Srrm4	59	56.334	Nannospalax_galili
ENSGAGG00000017218	SRRM4	82	59.604	ENSNLEG00000000200	SRRM4	58	55.795	Nomascus_leucogenys
ENSGAGG00000017218	SRRM4	82	60.400	ENSODEG00000006291	SRRM4	58	57.951	Octodon_degus
ENSGAGG00000017218	SRRM4	81	58.800	ENSOCUG00000004503	SRRM4	53	56.604	Oryctolagus_cuniculus
ENSGAGG00000017218	SRRM4	78	60.334	ENSOGAG00000015431	SRRM4	54	58.261	Otolemur_garnettii
ENSGAGG00000017218	SRRM4	56	55.977	ENSOARG00000002063	SRRM4	59	54.987	Ovis_aries
ENSGAGG00000017218	SRRM4	80	59.717	ENSPPAG00000028134	SRRM4	58	58.261	Pan_paniscus
ENSGAGG00000017218	SRRM4	81	60.600	ENSPPRG00000002659	SRRM4	58	56.334	Panthera_pardus
ENSGAGG00000017218	SRRM4	82	59.604	ENSPTRG00000005517	SRRM4	58	55.795	Pan_troglodytes
ENSGAGG00000017218	SRRM4	82	59.406	ENSPANG00000022544	SRRM4	70	55.526	Papio_anubis
ENSGAGG00000017218	SRRM4	78	61.378	ENSPCOG00000013803	SRRM4	55	57.971	Propithecus_coquereli
ENSGAGG00000017218	SRRM4	80	60.526	ENSPVAG00000017487	SRRM4	62	58.056	Pteropus_vampyrus
ENSGAGG00000017218	SRRM4	81	65.000	ENSSHAG00000017330	SRRM4	88	64.741	Sarcophilus_harrisii
ENSGAGG00000017218	SRRM4	82	59.406	ENSSSCG00000009845	SRRM4	58	56.065	Sus_scrofa
ENSGAGG00000017218	SRRM4	59	67.590	ENSTGUG00000009228	SRRM4	84	69.941	Taeniopygia_guttata
ENSGAGG00000017218	SRRM4	58	45.810	ENSXETG00000019934	SRRM4	90	48.915	Xenopus_tropicalis