EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000017325 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 8841 bases
Position: chrPPEB01004585.1:65330-74170
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000023642	RRM_1	PF00076.22	2.1e-29	1	2
ENSGAGP00000023642	RRM_1	PF00076.22	2.1e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000026937	-	2633	-	ENSGAGP00000023642	645 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000017325's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000017325's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000017325	-	69	57.233	ENSGAGG00000019164	PSPC1	90	58.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000017325	-	56	68.306	ENSG00000121390	PSPC1	84	72.892	Homo_sapiens
ENSGAGG00000017325	-	67	57.050	ENSAPOG00000015946	pspc1	71	65.691	Acanthochromis_polyacanthus
ENSGAGG00000017325	-	58	67.105	ENSAMEG00000017420	PSPC1	91	59.583	Ailuropoda_melanoleuca
ENSGAGG00000017325	-	69	55.925	ENSAOCG00000005279	pspc1	71	65.426	Amphiprion_ocellaris
ENSGAGG00000017325	-	65	59.719	ENSAPEG00000015927	pspc1	71	65.426	Amphiprion_percula
ENSGAGG00000017325	-	58	56.341	ENSAPLG00000006246	PSPC1	100	57.740	Anas_platyrhynchos
ENSGAGG00000017325	-	74	88.889	ENSAPLG00000003643	SFPQ	83	95.853	Anas_platyrhynchos
ENSGAGG00000017325	-	68	91.383	ENSACAG00000013307	-	68	91.156	Anolis_carolinensis
ENSGAGG00000017325	-	54	69.774	ENSACAG00000002093	PSPC1	69	69.648	Anolis_carolinensis
ENSGAGG00000017325	-	58	66.841	ENSANAG00000000059	PSPC1	88	68.678	Aotus_nancymaae
ENSGAGG00000017325	-	62	59.762	ENSAMXG00000036881	pspc1	67	67.887	Astyanax_mexicanus
ENSGAGG00000017325	-	56	67.935	ENSBTAG00000003934	PSPC1	92	59.375	Bos_taurus
ENSGAGG00000017325	-	58	66.841	ENSCJAG00000004554	PSPC1	92	59.420	Callithrix_jacchus
ENSGAGG00000017325	-	56	68.306	ENSCAFG00020002009	PSPC1	84	73.193	Canis_lupus_dingo
ENSGAGG00000017325	-	56	67.935	ENSCHIG00000016708	PSPC1	92	59.375	Capra_hircus
ENSGAGG00000017325	-	60	49.642	ENSTSYG00000032882	PSPC1	92	49.306	Carlito_syrichta
ENSGAGG00000017325	-	56	68.306	ENSCPOG00000000395	PSPC1	84	72.205	Cavia_porcellus
ENSGAGG00000017325	-	58	66.841	ENSCCAG00000033498	PSPC1	92	59.213	Cebus_capucinus
ENSGAGG00000017325	-	57	67.914	ENSCATG00000036434	PSPC1	94	72.012	Cercocebus_atys
ENSGAGG00000017325	-	69	57.233	ENSCPBG00000020859	PSPC1	90	58.526	Chrysemys_picta_bellii
ENSGAGG00000017325	-	58	66.580	ENSCGRG00001018368	Pspc1	92	58.848	Cricetulus_griseus_chok1gshd
ENSGAGG00000017325	-	58	66.580	ENSCGRG00000011724	Pspc1	92	58.848	Cricetulus_griseus_crigri
ENSGAGG00000017325	-	69	54.604	ENSCVAG00000007679	-	89	56.710	Cyprinodon_variegatus
ENSGAGG00000017325	-	67	57.516	ENSDARG00000006621	pspc1	72	67.123	Danio_rerio
ENSGAGG00000017325	-	56	68.207	ENSDNOG00000011078	PSPC1	89	60.256	Dasypus_novemcinctus
ENSGAGG00000017325	-	58	64.380	ENSDORG00000016050	Pspc1	91	56.994	Dipodomys_ordii
ENSGAGG00000017325	-	65	62.972	ENSEBUG00000003964	-	61	72.647	Eptatretus_burgeri
ENSGAGG00000017325	-	56	68.306	ENSEASG00005000119	PSPC1	81	74.528	Equus_asinus_asinus
ENSGAGG00000017325	-	56	68.306	ENSECAG00000017286	PSPC1	81	74.528	Equus_caballus
ENSGAGG00000017325	-	56	65.668	ENSELUG00000003746	pspc1	78	69.817	Esox_lucius
ENSGAGG00000017325	-	56	68.306	ENSFCAG00000027841	PSPC1	83	72.892	Felis_catus
ENSGAGG00000017325	-	69	57.741	ENSFALG00000008750	PSPC1	89	58.737	Ficedula_albicollis
ENSGAGG00000017325	-	56	68.306	ENSFDAG00000002617	PSPC1	91	60.086	Fukomys_damarensis
ENSGAGG00000017325	-	67	55.381	ENSGMOG00000015074	pspc1	55	72.281	Gadus_morhua
ENSGAGG00000017325	-	67	58.333	ENSGALG00000017142	PSPC1	91	58.212	Gallus_gallus
ENSGAGG00000017325	-	67	53.139	ENSGACG00000014901	pspc1	90	66.049	Gasterosteus_aculeatus
ENSGAGG00000017325	-	56	68.306	ENSGGOG00000003414	PSPC1	84	72.892	Gorilla_gorilla
ENSGAGG00000017325	-	64	57.619	ENSHBUG00000001139	pspc1	70	64.228	Haplochromis_burtoni
ENSGAGG00000017325	-	56	68.306	ENSHGLG00000018811	PSPC1	89	60.086	Heterocephalus_glaber_female
ENSGAGG00000017325	-	60	58.734	ENSHCOG00000013251	pspc1	81	61.308	Hippocampus_comes
ENSGAGG00000017325	-	64	60.095	ENSIPUG00000013192	pspc1	66	69.516	Ictalurus_punctatus
ENSGAGG00000017325	-	56	68.306	ENSSTOG00000026833	PSPC1	85	72.537	Ictidomys_tridecemlineatus
ENSGAGG00000017325	-	56	68.033	ENSJJAG00000018334	Pspc1	92	58.848	Jaculus_jaculus
ENSGAGG00000017325	-	64	55.344	ENSLBEG00000004474	pspc1	75	62.712	Labrus_bergylta
ENSGAGG00000017325	-	60	64.039	ENSLACG00000010762	PSPC1	90	59.958	Latimeria_chalumnae
ENSGAGG00000017325	-	62	61.058	ENSLOCG00000010832	pspc1	90	59.740	Lepisosteus_oculatus
ENSGAGG00000017325	-	56	68.306	ENSLAFG00000010968	PSPC1	89	60.300	Loxodonta_africana
ENSGAGG00000017325	-	56	68.306	ENSMFAG00000032728	PSPC1	92	72.892	Macaca_fascicularis
ENSGAGG00000017325	-	57	67.385	ENSMMUG00000020262	PSPC1	89	72.892	Macaca_mulatta
ENSGAGG00000017325	-	56	68.306	ENSMNEG00000027401	PSPC1	91	59.583	Macaca_nemestrina
ENSGAGG00000017325	-	64	58.294	ENSMAMG00000004333	pspc1	69	62.264	Mastacembelus_armatus
ENSGAGG00000017325	-	58	56.311	ENSMGAG00000015134	PSPC1	100	57.524	Meleagris_gallopavo
ENSGAGG00000017325	-	58	62.402	ENSMAUG00000021067	Pspc1	81	61.082	Mesocricetus_auratus
ENSGAGG00000017325	-	69	58.004	ENSMICG00000013970	PSPC1	84	72.424	Microcebus_murinus
ENSGAGG00000017325	-	58	66.754	ENSMOCG00000006060	Pspc1	92	59.336	Microtus_ochrogaster
ENSGAGG00000017325	-	56	68.033	ENSMODG00000008029	PSPC1	58	69.780	Monodelphis_domestica
ENSGAGG00000017325	-	67	55.556	ENSMALG00000008914	pspc1	71	60.963	Monopterus_albus
ENSGAGG00000017325	-	58	66.580	MGP_CAROLIEiJ_G0019341	Pspc1	84	71.429	Mus_caroli
ENSGAGG00000017325	-	58	66.580	ENSMUSG00000021938	Pspc1	83	71.429	Mus_musculus
ENSGAGG00000017325	-	58	66.580	MGP_PahariEiJ_G0030359	Pspc1	84	71.429	Mus_pahari
ENSGAGG00000017325	-	58	66.580	MGP_SPRETEiJ_G0020232	Pspc1	84	71.429	Mus_spretus
ENSGAGG00000017325	-	56	68.306	ENSMPUG00000013347	PSPC1	91	59.583	Mustela_putorius_furo
ENSGAGG00000017325	-	56	67.751	ENSMLUG00000017663	PSPC1	89	59.701	Myotis_lucifugus
ENSGAGG00000017325	-	70	57.851	ENSNGAG00000011271	Pspc1	92	58.848	Nannospalax_galili
ENSGAGG00000017325	-	56	68.306	ENSNLEG00000001294	PSPC1	89	60.300	Nomascus_leucogenys
ENSGAGG00000017325	-	67	45.816	ENSODEG00000007817	-	88	48.414	Octodon_degus
ENSGAGG00000017325	-	67	53.632	ENSODEG00000019012	-	92	54.132	Octodon_degus
ENSGAGG00000017325	-	65	57.377	ENSONIG00000012010	pspc1	70	61.333	Oreochromis_niloticus
ENSGAGG00000017325	-	57	54.424	ENSOANG00000011381	-	70	55.775	Ornithorhynchus_anatinus
ENSGAGG00000017325	-	56	68.493	ENSOCUG00000006153	PSPC1	92	59.129	Oryctolagus_cuniculus
ENSGAGG00000017325	-	69	56.616	ENSORLG00000004232	-	88	55.269	Oryzias_latipes
ENSGAGG00000017325	-	69	57.701	ENSORLG00020000578	PSPC1	88	56.129	Oryzias_latipes_hni
ENSGAGG00000017325	-	69	56.616	ENSORLG00015017480	pspc1	78	59.564	Oryzias_latipes_hsok
ENSGAGG00000017325	-	58	66.841	ENSOGAG00000012643	PSPC1	92	59.420	Otolemur_garnettii
ENSGAGG00000017325	-	54	66.667	ENSOARG00000014163	PSPC1	95	59.785	Ovis_aries
ENSGAGG00000017325	-	56	68.306	ENSPPRG00000008833	PSPC1	89	60.300	Panthera_pardus
ENSGAGG00000017325	-	56	68.306	ENSPTRG00000005677	PSPC1	84	72.892	Pan_troglodytes
ENSGAGG00000017325	-	56	68.306	ENSPANG00000001992	PSPC1	91	72.892	Papio_anubis
ENSGAGG00000017325	-	65	59.579	ENSPKIG00000003578	pspc1	88	58.369	Paramormyrops_kingsleyae
ENSGAGG00000017325	-	69	57.023	ENSPSIG00000005168	PSPC1	90	58.071	Pelodiscus_sinensis
ENSGAGG00000017325	-	58	66.580	ENSPEMG00000015214	Pspc1	92	59.053	Peromyscus_maniculatus_bairdii
ENSGAGG00000017325	-	56	68.033	ENSPCIG00000017680	PSPC1	89	59.657	Phascolarctos_cinereus
ENSGAGG00000017325	-	64	57.275	ENSPFOG00000003362	pspc1	74	64.304	Poecilia_formosa
ENSGAGG00000017325	-	64	57.275	ENSPLAG00000011540	pspc1	73	64.304	Poecilia_latipinna
ENSGAGG00000017325	-	64	57.044	ENSPMEG00000008322	pspc1	73	64.042	Poecilia_mexicana
ENSGAGG00000017325	-	69	54.184	ENSPREG00000007786	pspc1	91	56.695	Poecilia_reticulata
ENSGAGG00000017325	-	56	68.306	ENSPPYG00000005186	PSPC1	89	60.086	Pongo_abelii
ENSGAGG00000017325	-	70	57.839	ENSPCOG00000014364	PSPC1	91	58.947	Propithecus_coquereli
ENSGAGG00000017325	-	67	58.244	ENSPVAG00000005036	PSPC1	89	59.871	Pteropus_vampyrus
ENSGAGG00000017325	-	62	62.740	ENSPNAG00000016511	pspc1	67	72.611	Pygocentrus_nattereri
ENSGAGG00000017325	-	58	66.580	ENSRNOG00000020782	Pspc1	92	58.848	Rattus_norvegicus
ENSGAGG00000017325	-	58	67.105	ENSRBIG00000036057	PSPC1	94	71.720	Rhinopithecus_bieti
ENSGAGG00000017325	-	58	67.105	ENSRROG00000036334	PSPC1	84	72.892	Rhinopithecus_roxellana
ENSGAGG00000017325	-	56	61.957	ENSSHAG00000004696	PSPC1	88	54.915	Sarcophilus_harrisii
ENSGAGG00000017325	-	60	61.404	ENSSFOG00015001395	pspc1	74	70.085	Scleropages_formosus
ENSGAGG00000017325	-	71	51.423	ENSSMAG00000001761	pspc1	78	67.937	Scophthalmus_maximus
ENSGAGG00000017325	-	61	58.809	ENSSDUG00000010651	pspc1	69	63.926	Seriola_dumerili
ENSGAGG00000017325	-	62	56.731	ENSSARG00000000888	PSPC1	92	51.210	Sorex_araneus
ENSGAGG00000017325	-	68	86.395	ENSSPUG00000001136	-	67	85.843	Sphenodon_punctatus
ENSGAGG00000017325	-	65	58.548	ENSSPAG00000001921	pspc1	69	65.583	Stegastes_partitus
ENSGAGG00000017325	-	56	68.033	ENSSSCG00000009569	PSPC1	85	71.988	Sus_scrofa
ENSGAGG00000017325	-	67	58.422	ENSTGUG00000011295	PSPC1	99	59.442	Taeniopygia_guttata
ENSGAGG00000017325	-	66	53.524	ENSTRUG00000011335	pspc1	86	51.974	Takifugu_rubripes
ENSGAGG00000017325	-	66	53.986	ENSTNIG00000010358	pspc1	86	54.139	Tetraodon_nigroviridis
ENSGAGG00000017325	-	54	62.500	ENSTBEG00000002361	PSPC1	68	63.920	Tupaia_belangeri
ENSGAGG00000017325	-	56	68.033	ENSTTRG00000003343	PSPC1	89	60.086	Tursiops_truncatus
ENSGAGG00000017325	-	58	66.842	ENSUMAG00000013993	PSPC1	92	72.590	Ursus_maritimus
ENSGAGG00000017325	-	56	68.306	ENSVVUG00000006414	PSPC1	86	73.193	Vulpes_vulpes